Your browser is old and dusty. Try Google Chrome!

Details for NP_441514.1_4

Name NP_441514.1_4
Length 20
Regular expression A[AT][AG]AA[TA][AT]AT[TA]T[AGT][AG]G[AG]A[AGT]TTT
Central Yes

Motif logo

Genes containing this motif

176 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1206 Forward -162 -143 18.5218 0.111
slr1120 Forward -198 -179 14.7358 0.226
sll1053 Reverse -98 -117 14.8329 0.226
slr1123 Forward -171 -152 14.8329 0.226
sll1052 Reverse -10 -29 15.1241 0.226
slr0727 Forward -139 -120 12.8913 0.273
slr0739 Forward -157 -138 12.3088 0.292
sll1319 Reverse -226 -245 13.765 0.26
sll1318 Reverse -17 -36 15.2212 0.226
sll1029 Reverse -275 -294 12.8913 0.273
slr1788 Forward -319 -300 11.9205 0.297
sll1662 Reverse -194 -213 16.1919 0.197
slr1798 Forward -37 -18 16.1919 0.197
sll1200 Reverse -180 -199 13.1825 0.269
slr1293 Forward -38 -19 13.1825 0.269
slr0984 Forward -57 -38 13.765 0.26
slr1064 Reverse -78 -97 12.3088 0.292
sll0654 Forward -328 -309 20.4633 0.0744
slr0681 Forward -61 -42 13.9592 0.25
sll1006 Forward -352 -333 12.9884 0.272
ssl1923 Reverse -30 -49 13.1825 0.269
ssl1922 Forward -312 -293 15.027 0.226
ssl1920 Forward -124 -105 15.027 0.226
sll1642 Reverse -343 -362 14.8329 0.226
slr1764 Reverse -359 -378 12.9884 0.272
sll1749a Forward -349 -330 16.4832 0.185
slr1851 Reverse -245 -264 16.4832 0.185
slr1909 Reverse -56 -75 15.3182 0.226
sll1285 Forward -399 -380 12.4059 0.292
sll1568 Reverse -278 -297 15.7065 0.214
sll1920 Forward -172 -153 13.1825 0.269
slr2023 Reverse -17 -36 13.1825 0.269
slr1133 Reverse -249 -268 19.7838 0.0744
slr1135 Forward -221 -202 13.1825 0.269
sll1068 Reverse -345 -364 11.9205 0.297
ssl3451 Reverse -63 -82 11.9205 0.297
slr1890 Forward -68 -49 11.9205 0.297
sll1823 Forward -308 -289 12.1147 0.294
ssl3446 Reverse -291 -310 12.1147 0.294
sll1732 Reverse -354 -373 14.0562 0.25
sll1732 Reverse -297 -316 12.7942 0.28
sll1714 Forward -136 -117 12.1147 0.294
sll1459 Forward -396 -377 13.1825 0.269
sll1633 Reverse -240 -259 12.3088 0.292
sll1135 Forward -43 -24 11.9205 0.297
slr1232 Reverse -111 -130 11.9205 0.297
slr1435 Reverse -203 -222 12.7942 0.28
slr1437 Reverse -308 -327 11.8235 0.3
sll0871 Reverse -11 -30 12.1147 0.294
slr0884 Forward -305 -286 12.1147 0.294
slr0890 Reverse -143 -162 17.4539 0.162
sll0863 Reverse -325 -344 15.7065 0.214
sll0861 Reverse -31 -50 14.4445 0.245
slr1854 Reverse -61 -80 12.6001 0.292
slr1864 Forward -360 -341 12.2118 0.294
sll1775 Forward -285 -266 15.8036 0.214
sll1757 Forward -129 -110 14.5416 0.236
ssr3188 Reverse -16 -35 14.5416 0.236
slr1813 Forward -22 -3 13.4738 0.269
slr1247 Forward -221 -202 13.4738 0.269
slr1259 Forward -135 -116 15.9007 0.214
sll1961 Forward -52 -33 11.8235 0.3
sll1957 Reverse -28 -47 13.0855 0.272
slr2057 Forward -344 -325 13.0855 0.272
sll1613 Reverse -44 -63 15.1241 0.226
sll1609 Forward -233 -214 13.3767 0.269
sll1601 Forward -158 -139 11.8235 0.3
slr2104 Reverse -252 -271 16.0949 0.197
sll1240 Forward -322 -303 13.9592 0.25
sll0819 Reverse -162 -181 11.9205 0.297
sll0816 Reverse -275 -294 12.4059 0.292
sll0804 Reverse -275 -294 11.9205 0.297
sll1256 Reverse -138 -157 13.9592 0.25
slr1338 Forward -281 -262 13.9592 0.25
sll1897 Reverse -373 -392 12.0176 0.297
sll1895 Reverse -34 -53 14.8329 0.226
slr1963 Forward -311 -292 14.8329 0.226
slr1968 Forward -192 -173 12.8913 0.273
slr1983 Reverse -36 -55 13.9592 0.25
smr0011 Reverse -176 -195 13.3767 0.269
slr1469 Reverse -323 -342 13.3767 0.269
slr1152 Reverse -269 -288 13.3767 0.269
sll1086 Forward -227 -208 12.6972 0.286
slr1670 Reverse -301 -320 12.0176 0.297
sll1560 Reverse -144 -163 14.5416 0.236
slr1683 Forward -42 -23 14.5416 0.236
ssl3044 Reverse -28 -47 12.6972 0.286
slr1687 Forward -117 -98 12.6972 0.286
sll0910 Forward -25 -6 12.7942 0.28
slr1623 Reverse -216 -235 17.8422 0.154
sll1537 Reverse -5 -24 13.765 0.26
sll1527 Reverse -62 -81 12.6001 0.292
sll0265 Reverse -332 -351 13.1825 0.269
sll0355 Reverse -344 -363 12.4059 0.292
slr0992 Forward -143 -124 13.5709 0.269
sll0300 Reverse -267 -286 14.7358 0.226
slr0327 Forward -295 -276 14.7358 0.226
sll0171 Reverse -14 -33 13.5709 0.269
slr0185 Forward -348 -329 12.9884 0.272
slr0771 Forward -21 -2 13.1825 0.269
slr0350 Reverse -339 -358 12.4059 0.292
slr0013 Reverse -31 -50 15.1241 0.226
ssr0349 Reverse -362 -381 13.3767 0.269
sll0208 Reverse -348 -367 13.4738 0.269
sll0414 Forward -275 -256 12.503 0.292
sll0409 Forward -81 -62 12.503 0.292
sll0400 Reverse -8 -27 11.8235 0.3
slr0440 Forward -55 -36 11.8235 0.3
sll0071 Forward -67 -48 15.2212 0.226
slr0051 Forward -171 -152 18.2306 0.126
slr0061 Reverse -94 -113 14.7358 0.226
sll0051 Forward -215 -196 12.8913 0.273
sll0689 Reverse -167 -186 12.6001 0.292
sll0680 Forward -285 -266 12.8913 0.273
ssl0738 Forward -396 -377 11.9205 0.297
sll0180 Forward -153 -134 12.503 0.292
slr0204 Reverse -104 -123 12.503 0.292
ssr1527 Reverse -97 -116 14.2504 0.25
slr0903 Reverse -348 -367 14.2504 0.25
slr0915 Reverse -141 -160 16.9686 0.177
ssl1690 Reverse -284 -303 14.8329 0.226
slr0921 Forward -99 -80 14.8329 0.226
sll0553 Forward -391 -372 13.4738 0.269
slr0092 Forward -113 -94 14.0562 0.25
sll0485 Reverse -172 -191 14.3475 0.246
slr0506 Forward -27 -8 11.8235 0.3
slr0517 Forward -67 -48 14.1533 0.25
slr0616 Forward -149 -130 13.9592 0.25
ssr1041 Reverse -345 -364 13.1825 0.269
sll0102 Reverse -6 -25 12.9884 0.272
slr0105 Forward -340 -321 12.9884 0.272
slr0119 Forward -141 -122 14.3475 0.246
slr0120 Forward -57 -38 14.7358 0.226
slr0120 Reverse -363 -382 12.503 0.292
slr0302 Reverse -104 -123 14.3475 0.246
slr0302 Forward -73 -54 12.0176 0.297
sll0670 Forward -148 -129 12.9884 0.272
sll0745 Forward -23 -4 15.4153 0.226
sll0745 Forward -24 -5 13.2796 0.269
sll0048 Forward -96 -77 12.1147 0.294
slr0022 Reverse -356 -375 12.1147 0.294
slr0541 Forward -362 -343 16.3861 0.189
sll0496 Forward -54 -35 13.9592 0.25
sll1344 Forward -137 -118 12.1147 0.294
slr1455 Reverse -11 -30 12.4059 0.292
slr1564 Reverse -311 -330 13.8621 0.259
sll1473 Reverse -312 -331 17.0656 0.177
sll0733 Reverse -128 -147 16.7744 0.185
sll0726 Reverse -243 -262 12.1147 0.294
slr0756 Forward -99 -80 12.1147 0.294
slr0757 Reverse -36 -55 12.4059 0.292
slr1652 Reverse -340 -359 18.813 0.0985
sll1545 Reverse -294 -313 13.9592 0.25
slr1668 Forward -50 -31 12.0176 0.297
sll0447 Forward -301 -282 15.7065 0.214
sll5004 Reverse -323 -342 15.1241 0.226
slr5005 Forward -379 -360 15.1241 0.226
sll5006 Forward -25 -6 19.2984 0.0744
sll5006 Forward -372 -353 12.3088 0.292
ssl5007 Forward -24 -5 12.3088 0.292
slr5038 Reverse -109 -128 13.765 0.26
sll5048 Reverse -236 -255 12.4059 0.292
sll5090 Forward -25 -6 19.2984 0.0744
ssl5091 Forward -320 -301 13.3767 0.269
ssr5092 Reverse -52 -71 13.3767 0.269
sll5107 Forward -24 -5 17.4539 0.162
sll5131 Forward -358 -339 12.1147 0.294
sll7106 Reverse -190 -209 12.503 0.292
ssl7019 Reverse -282 -301 13.0855 0.272
ssl7019 Reverse -130 -149 13.0855 0.272
ssl7020 Forward -252 -233 16.5802 0.185
sll7029 Reverse -352 -371 13.4738 0.269
sll7034 Reverse -246 -265 17.3569 0.162
ssr7035 Forward -207 -188 17.3569 0.162
ssr6002 Forward -24 -5 12.3088 0.292
ssr6003 Forward -25 -6 19.2984 0.0744
ssr6003 Forward -372 -353 12.3088 0.292
slr6004 Forward -222 -203 19.2984 0.0744
slr6022 Forward -208 -189 16.5802 0.185
slr6050 Reverse -324 -343 13.9592 0.25
slr6063 Forward -25 -6 19.2984 0.0744
slr6081 Forward -208 -189 16.5802 0.185
6803t34 Reverse -86 -105 16.9686 0.177
6803t34 Reverse -335 -354 11.9205 0.297
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.917  0.000  0.083  0.000  
0.417 0.083 0.083 0.417
0.500 0.083 0.250 0.167
0.750 0.167 0.083 0.000
0.833 0.000 0.000 0.167
0.333 0.000 0.083 0.583
0.583 0.167 0.000 0.250
0.917 0.000 0.083 0.000
0.083 0.000 0.000 0.917
0.333 0.167 0.000 0.500
0.167 0.000 0.000 0.833
0.500 0.000 0.250 0.250
0.500 0.000 0.500 0.000
0.083 0.000 0.917 0.000
0.417 0.083 0.417 0.083
0.667 0.167 0.167 0.000
0.500 0.000 0.250 0.250
0.083 0.000 0.083 0.833
0.000 0.083 0.000 0.917
0.167 0.000 0.167 0.667