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Details for NP_441502.1_3

Name NP_441502.1_3
Length 20
Regular expression [GC]TG[AG]G[AG]AT[TG]GC[CTG]GA[GT]G[GA]GAT
Central No

Motif logo

Genes containing this motif

164 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0612 Forward -216 -197 5.40766 0.289
sll1212 Reverse -75 -94 9.14423 0.212
slr1115 Reverse -214 -233 10.5209 0.21
ssl2069 Forward -348 -329 18.289 0.112
sll1049 Reverse -219 -238 13.7658 0.21
sll0712 Forward -205 -186 9.3409 0.212
sll0712 Forward -105 -86 6.09597 0.282
slr0723 Forward -131 -112 12.2908 0.21
sml0003 Reverse -72 -91 7.17762 0.247
slr0245 Forward -77 -58 7.17762 0.247
ssl0410 Forward -273 -254 6.78429 0.251
sll0216 Reverse -333 -352 5.30933 0.291
sll1321 Reverse -162 -181 9.3409 0.212
sll1321 Forward -175 -156 5.60432 0.287
slr1413 Forward -37 -18 9.3409 0.212
slr1413 Reverse -24 -43 5.60432 0.287
ssr3000 Forward -395 -376 8.75091 0.215
sll1187 Forward -24 -5 11.2092 0.21
slr0965 Forward -204 -185 9.43923 0.212
slr0975 Forward -117 -98 5.99764 0.282
slr0978 Forward -103 -84 6.39097 0.267
slr1618 Forward -201 -182 5.40766 0.289
ssr1768 Reverse -271 -290 8.45592 0.215
slr1847 Forward -188 -169 4.62101 0.299
slr1849 Forward -390 -371 5.80098 0.287
ssr3452 Forward -249 -230 8.25926 0.218
slr2044 Forward -100 -81 18.289 0.112
slr2047 Reverse -31 -50 5.211 0.297
slr1911 Forward -62 -43 10.4225 0.21
slr1911 Forward -74 -55 5.99764 0.282
slr1918 Reverse -315 -334 4.42435 0.299
sll0998 Reverse -298 -317 9.3409 0.212
slr1019 Forward -323 -304 9.3409 0.212
sll0995 Forward -136 -117 10.8159 0.21
slr1032 Forward -294 -275 5.11266 0.299
sll1583 Reverse -257 -276 6.88262 0.25
slr1710 Forward -293 -274 4.71934 0.299
slr2016 Forward -275 -256 9.93088 0.21
sll1920 Forward -271 -252 4.52268 0.299
sll1912 Forward -89 -70 7.66927 0.242
slr2030 Reverse -155 -174 7.47261 0.244
sll1082 Forward -217 -198 18.6823 0.112
sll1071 Reverse -151 -170 11.1109 0.21
sll1821 Reverse -70 -89 12.1925 0.21
sll1810 Forward -362 -343 5.01433 0.299
slr1901 Forward -131 -112 10.3242 0.21
sll1737 Reverse -90 -109 8.45592 0.215
slr1828 Forward -160 -141 8.45592 0.215
sll1736 Forward -214 -195 8.45592 0.215
sll1713 Reverse -255 -274 6.98095 0.248
sll1464 Forward -313 -294 9.43923 0.212
sll1455 Reverse -199 -218 7.66927 0.242
slr1222 Reverse -69 -88 5.80098 0.287
slr1235 Reverse -329 -348 10.9142 0.21
sll1132 Reverse -180 -199 6.98095 0.248
sll2015 Forward -157 -138 11.4058 0.21
sll2012 Forward -255 -236 5.60432 0.287
slr2136 Forward -62 -43 8.35759 0.215
sll1699 Reverse -315 -334 4.42435 0.299
slr1816 Forward -194 -175 4.42435 0.299
sll1626 Reverse -135 -154 9.73422 0.212
sll0858 Forward -180 -161 6.98095 0.248
sll0846 Forward -366 -347 4.42435 0.299
slr0273 Forward -248 -229 4.81767 0.299
slr2079 Forward -189 -170 6.88262 0.25
sll1980 Forward -212 -193 8.55425 0.215
slr2095 Reverse -244 -263 10.1275 0.21
slr1511 Reverse -72 -91 4.71934 0.299
slr1513 Reverse -186 -205 8.35759 0.215
slr1517 Reverse -331 -350 5.99764 0.282
ssl2749 Forward -289 -270 5.40766 0.289
slr2131 Reverse -333 -352 4.81767 0.299
slr0820 Forward -177 -158 12.6841 0.21
sll1258 Reverse -47 -66 5.80098 0.287
slr1344 Reverse -109 -128 7.27595 0.246
sll1242 Forward -168 -149 6.29264 0.272
sll1878 Reverse -215 -234 11.4058 0.21
sll1371 Reverse -246 -265 4.71934 0.299
sll1442 Forward -184 -165 7.07928 0.248
slr1530 Reverse -165 -184 10.4225 0.21
slr1530 Forward -152 -133 4.52268 0.299
sll1435 Reverse -61 -80 5.40766 0.289
ssl2162 Reverse -226 -245 5.01433 0.299
sll1103 Reverse -258 -277 11.1109 0.21
slr1174 Forward -39 -20 6.58763 0.26
slr1674 Forward -177 -158 5.30933 0.291
sll1564 Reverse -240 -259 4.32602 0.299
ssr2802 Forward -120 -101 4.32602 0.299
ssr2803 Forward -306 -287 4.32602 0.299
ssl3044 Reverse -139 -158 5.60432 0.287
sll0916 Forward -107 -88 8.55425 0.215
slr0950 Forward -149 -130 7.66927 0.242
sll1537 Reverse -339 -358 5.01433 0.299
slr1627 Forward -139 -120 5.01433 0.299
slr0446 Reverse -114 -133 11.0125 0.21
sll0269 Forward -222 -203 12.1925 0.21
sll0364 Reverse -286 -305 5.60432 0.287
slr0395 Forward -376 -357 5.70265 0.287
sll0360 Forward -26 -7 5.30933 0.291
slr0149 Forward -260 -241 4.71934 0.299
sll0147 Reverse -173 -192 7.57094 0.243
sll0135 Forward -22 -3 4.42435 0.299
sll0945 Reverse -310 -329 6.98095 0.248
slr0322 Forward -273 -254 4.32602 0.299
sll0293 Reverse -379 -398 4.916 0.299
slr0369 Forward -312 -293 4.42435 0.299
sll0336 Reverse -16 -35 11.5042 0.21
slr0380 Reverse -177 -196 4.62101 0.299
slr0383 Reverse -40 -59 4.52268 0.299
slr0769 Forward -304 -285 10.0292 0.21
slr0357 Forward -181 -162 4.62101 0.299
slr0008 Reverse -273 -292 20.059 0.112
sll0005 Forward -370 -351 4.32602 0.299
slr0230 Forward -112 -93 12.5858 0.21
slr0230 Reverse -99 -118 4.62101 0.299
slr0055 Forward -204 -185 10.7175 0.21
slr0069 Reverse -244 -263 7.47261 0.244
slr0489 Reverse -151 -170 7.7676 0.242
slr0496 Reverse -80 -99 4.81767 0.299
sll0454 Forward -126 -107 5.11266 0.299
sll0690 Reverse -195 -214 9.0459 0.215
sll0683 Reverse -255 -274 10.7175 0.21
sll0609 Forward -209 -190 9.93088 0.21
slr0645 Forward -193 -174 8.55425 0.215
slr0195 Forward -124 -105 10.6192 0.21
slr0900 Forward -360 -341 11.6025 0.21
slr0079 Forward -354 -335 11.7992 0.21
slr0088 Forward -58 -39 4.81767 0.299
slr0503 Reverse -43 -62 5.80098 0.287
slr0505 Reverse -253 -272 10.2259 0.21
slr0625 Forward -243 -224 9.93088 0.21
sll0109 Forward -266 -247 6.78429 0.251
slr0626 Forward -394 -375 9.73422 0.212
sll0107 Forward -392 -373 4.32602 0.299
sll0092 Reverse -103 -122 9.14423 0.212
slr0118 Forward -153 -134 9.14423 0.212
slr0023 Reverse -352 -371 4.32602 0.299
sll0044 Reverse -174 -193 15.0441 0.21
sll0043 Forward -346 -327 8.55425 0.215
sll0030 Forward -305 -286 5.50599 0.289
slr0557 Reverse -281 -300 7.57094 0.243
slr1423 Forward -386 -367 7.27595 0.246
slr1431 Forward -264 -245 10.8159 0.21
sll1486 Reverse -214 -233 10.0292 0.21
slr1665 Reverse -28 -47 4.32602 0.299
ssr2781 Reverse -123 -142 12.9791 0.21
sll0444 Forward -227 -208 4.62101 0.299
slr0457 Forward -69 -50 10.5209 0.21
sll0430 Forward -236 -217 7.37428 0.245
slr1176 Reverse -95 -114 7.37428 0.245
slr1177 Forward -232 -213 5.40766 0.289
sll5002 Forward -304 -285 4.42435 0.299
sll5047 Reverse -142 -161 8.06259 0.228
sll5052 Forward -299 -280 6.58763 0.26
ssl7007 Forward -317 -298 12.4875 0.21
slr7008 Reverse -333 -352 12.4875 0.21
sll7034 Forward -140 -121 8.35759 0.215
ssr7035 Reverse -313 -332 8.35759 0.215
slr7096 Forward -333 -314 9.24257 0.212
ssr6032 Forward -184 -165 10.2259 0.21
slr6033 Forward -203 -184 10.2259 0.21
slr6041 Forward -42 -23 12.0942 0.21
sll6053 Forward -320 -301 11.7992 0.21
slr6091 Forward -203 -184 10.2259 0.21
slr6101 Forward -190 -171 6.09597 0.282
6803t01 Reverse -159 -178 11.1109 0.21
6803t04 Reverse -189 -208 15.9291 0.209
6803t18 Reverse -336 -355 8.84924 0.215
6803r01 Forward -239 -220 6.4893 0.262
6803r06 Forward -239 -220 6.4893 0.262
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.364  0.636  0.000  
0.182 0.000 0.000 0.818
0.000 0.000 1.000 0.000
0.636 0.000 0.273 0.091
0.091 0.182 0.727 0.000
0.636 0.000 0.273 0.091
0.909 0.091 0.000 0.000
0.000 0.000 0.000 1.000
0.182 0.182 0.273 0.364
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.364 0.273 0.364
0.182 0.000 0.636 0.182
0.818 0.182 0.000 0.000
0.182 0.091 0.364 0.364
0.000 0.000 1.000 0.000
0.364 0.000 0.545 0.091
0.182 0.000 0.818 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.182 0.818