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Details for NP_441460.1_2

Name NP_441460.1_2
Length 14
Regular expression TTT[TAC]C[CT]CT[GC][GA][CA][GC][GC][AC]
Central Yes

Motif logo

Genes containing this motif

109 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1119 Reverse -243 -256 18.7999 0.0735
slr1125 Reverse -351 -364 13.785 0.277
slr0241 Forward -389 -376 13.2934 0.289
sgl0002 Forward -224 -211 13.195 0.289
sml0004 Forward -92 -79 13.195 0.289
slr0254 Reverse -73 -86 13.195 0.289
sll0218 Reverse -233 -246 13.0967 0.297
slr1416 Forward -20 -7 15.85 0.171
slr1096 Reverse -308 -321 16.0466 0.162
sll1677 Forward -239 -226 15.555 0.171
slr1298 Reverse -365 -378 17.1282 0.125
sll0931 Reverse -265 -278 15.9483 0.171
ssr1155 Forward -185 -172 17.7182 0.101
slr0689 Forward -166 -153 15.0633 0.2
slr1052 Forward -247 -234 15.1616 0.197
slr1377 Forward -16 -3 14.4733 0.234
sll1570 Reverse -224 -237 14.4733 0.234
slr2005 Forward -119 -106 14.4733 0.234
slr2009 Forward -219 -206 14.965 0.208
slr2017 Forward -373 -360 18.5049 0.0754
sll1916 Forward -330 -317 17.0299 0.125
ssl3445 Reverse -112 -125 13.2934 0.289
slr1902 Forward -382 -369 15.6533 0.171
sll1721 Reverse -372 -385 13.8833 0.268
ssr2611 Forward -148 -135 13.195 0.289
ssr2047 Reverse -353 -366 14.08 0.259
slr1363 Reverse -199 -212 15.85 0.171
slr1366 Forward -346 -333 13.2934 0.289
sll1775 Reverse -298 -311 17.4232 0.116
slr1869 Reverse -285 -298 14.8666 0.211
sll1760 Forward -67 -54 15.6533 0.171
slr1880 Reverse -193 -206 15.6533 0.171
sll2010 Reverse -246 -259 14.1783 0.25
sll2005 Forward -263 -250 13.3917 0.289
slr1742 Reverse -381 -394 21.7498 0.00263
sll0857 Forward -190 -177 13.2934 0.289
slr1993 Reverse -223 -236 13.195 0.289
slr1999 Forward -145 -132 13.49 0.289
sll1600 Reverse -99 -112 16.0466 0.162
sll1973 Reverse -364 -377 14.7683 0.219
slr2128 Forward -226 -213 16.2433 0.153
slr1329 Reverse -291 -304 13.195 0.289
sll0804 Forward -61 -48 21.7498 0.00263
sll0803 Forward -75 -62 21.7498 0.00263
sll1249 Reverse -53 -66 15.555 0.171
sll1895 Reverse -358 -371 13.0967 0.297
sll1883 Reverse -89 -102 13.6867 0.28
sll1169 Reverse -128 -141 16.2433 0.153
sll1443 Reverse -241 -254 15.4566 0.172
slr1160 Forward -151 -138 15.1616 0.197
slr1173 Reverse -345 -358 13.49 0.289
slr0938 Forward -320 -307 13.195 0.289
slr0395 Reverse -84 -97 16.2433 0.153
ssr0657 Forward -153 -140 15.4566 0.172
slr0146 Reverse -224 -237 17.6199 0.101
slr1927 Forward -106 -93 16.8333 0.129
slr1943 Forward -212 -199 15.85 0.171
slr0376 Forward -22 -9 20.4715 0.0181
slr0354 Forward -368 -355 14.2767 0.244
slr0356 Forward -182 -169 18.1116 0.0851
slr0013 Reverse -68 -81 14.8666 0.211
sll0008 Forward -227 -214 15.555 0.171
sll0404 Forward -16 -3 14.2767 0.244
slr0438 Reverse -138 -151 14.2767 0.244
sll0063 Forward -341 -328 17.0299 0.125
slr0058 Reverse -203 -216 17.0299 0.125
slr0477 Reverse -137 -150 14.5717 0.234
slr0482 Reverse -47 -60 13.9817 0.268
sll0454 Forward -126 -113 14.1783 0.25
slr0633 Reverse -189 -202 14.8666 0.211
slr0643 Forward -126 -113 15.555 0.171
slr0643 Reverse -239 -252 13.5883 0.289
slr0645 Forward -359 -346 16.8333 0.129
slr0201 Reverse -367 -380 15.0633 0.2
sll0542 Reverse -110 -123 16.6366 0.133
slr0579 Forward -136 -123 16.6366 0.133
ssl1533 Reverse -382 -395 13.2934 0.289
slr0072 Forward -72 -59 14.4733 0.234
sll0482 Forward -193 -180 13.6867 0.28
sll0593 Forward -154 -141 18.3082 0.0754
slr0615 Reverse -53 -66 18.3082 0.0754
slr0108 Reverse -268 -281 16.5383 0.135
slr0302 Reverse -66 -79 16.6366 0.133
sll0283 Forward -378 -365 19.1932 0.0556
slr0309 Reverse -112 -125 19.1932 0.0556
slr0557 Forward -313 -300 13.6867 0.28
sll1336 Reverse -136 -149 13.2934 0.289
slr1428 Forward -50 -37 13.2934 0.289
sll0631 Reverse -349 -362 17.3249 0.12
sll1477 Reverse -258 -271 18.6032 0.0742
slr1583 Forward -380 -367 18.6032 0.0742
sll1471 Reverse -266 -279 16.0466 0.162
slr1585 Reverse -356 -369 15.4566 0.172
sll1470 Forward -36 -23 17.6199 0.101
slr1588 Reverse -193 -206 17.6199 0.101
slr0456 Reverse -238 -251 13.195 0.289
slr0460 Forward -355 -342 16.8333 0.129
sll5123 Reverse -79 -92 14.5717 0.234
slr5124 Forward -56 -43 14.5717 0.234
sll7033 Reverse -382 -395 13.8833 0.268
sll7034 Reverse -53 -66 13.8833 0.268
ssr7035 Forward -400 -387 13.8833 0.268
sll7078 Forward -360 -347 19.0949 0.0557
slr7095 Forward -77 -64 20.2748 0.0202
sll8009 Forward -210 -197 15.555 0.171
ssr6030 Reverse -351 -364 14.375 0.24
ssr6089 Reverse -351 -364 14.375 0.24
6803t02 Forward -159 -146 15.6533 0.171
6803t36 Reverse -157 -170 16.5383 0.135
6803t41 Forward -280 -267 17.1282 0.125
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.111  0.000  0.889  
0.000 0.000 0.000 1.000
0.000 0.000 0.111 0.889
0.222 0.222 0.000 0.556
0.000 1.000 0.000 0.000
0.000 0.444 0.111 0.444
0.111 0.889 0.000 0.000
0.000 0.000 0.111 0.889
0.000 0.222 0.667 0.111
0.222 0.111 0.667 0.000
0.333 0.556 0.111 0.000
0.000 0.444 0.556 0.000
0.000 0.222 0.778 0.000
0.778 0.222 0.000 0.000