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Details for NP_441443.1_1

Name NP_441443.1_1
Length 20
Regular expression GGGGG[CA][AG]G[GA]GGGACT[TC][GC]AA[CG]
Central No

Motif logo

Genes containing this motif

250 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Reverse -65 -84 11.7992 0.0707
slr1485 Reverse -216 -235 -0.983855 0.238
slr1490 Reverse -104 -123 -5.40875 0.298
slr1494 Reverse -66 -85 15.3391 0.0652
slr0742 Forward -71 -52 -1.57384 0.244
slr0245 Reverse -291 -310 -5.11376 0.297
sll1327 Forward -348 -329 -3.44213 0.287
slr1416 Reverse -185 -204 -2.95047 0.278
slr1094 Forward -152 -133 -2.26216 0.264
slr1105 Forward -353 -334 -2.65548 0.271
sll1037 Reverse -112 -131 2.85105 0.194
slr1107 Forward -325 -306 -0.787193 0.237
sll1685 Reverse -26 -45 -4.13045 0.287
slr1777 Forward -143 -124 -4.13045 0.287
slr1791 Forward -135 -116 -4.22878 0.287
sll1670 Reverse -198 -217 -5.50708 0.298
slr1796 Forward -80 -61 -5.50708 0.298
sll1652 Forward -95 -76 -4.32711 0.288
slr1289 Reverse -265 -284 -4.32711 0.288
sll1198 Reverse -268 -287 -2.16383 0.26
ssl2384 Reverse -84 -103 -2.16383 0.26
slr0965 Reverse -10 -29 -6.09707 0.3
slr0966 Forward -310 -291 -2.0655 0.258
slr0969 Forward -253 -234 -3.63879 0.287
sll0932 Forward -251 -232 -3.44213 0.287
sll0932 Forward -136 -117 -4.91709 0.297
sll0924 Forward -171 -152 1.0811 0.218
sll0647 Reverse -344 -363 -3.93378 0.287
slr1594 Forward -255 -236 -5.70374 0.298
slr1609 Forward -256 -237 -4.91709 0.297
sll1006 Forward -372 -353 -2.45882 0.271
sll1001 Forward -75 -56 -1.37718 0.244
slr1849 Forward -154 -135 -4.03212 0.287
slr2044 Forward -74 -55 2.16274 0.194
slr2048 Reverse -226 -245 -4.13045 0.287
sll1931 Reverse -26 -45 -5.31042 0.298
slr1910 Forward -269 -250 -1.37718 0.244
sll0990 Reverse -30 -49 -3.04881 0.281
slr1380 Forward -398 -379 -5.60541 0.298
sll1583 Reverse -123 -142 -3.83545 0.287
sll1573 Reverse -350 -369 -5.50708 0.298
slr2013 Forward -96 -77 -4.03212 0.287
sll1924 Forward -284 -265 1.0811 0.218
slr2015 Reverse -167 -186 1.0811 0.218
slr2016 Forward -324 -305 -1.57384 0.244
sll1917 Forward -279 -260 -3.73712 0.287
slr2030 Reverse -8 -27 -0.590531 0.237
slr1134 Forward -386 -367 -4.91709 0.297
slr1143 Reverse -234 -253 -1.47551 0.244
sll1068 Reverse -232 -251 -4.6221 0.297
slr1890 Forward -181 -162 -4.6221 0.297
ssl3441 Forward -292 -273 4.71934 0.194
sll1801 Reverse -380 -399 -5.99873 0.3
sll1789 Reverse -39 -58 -0.885524 0.237
sll1120 Reverse -7 -26 -3.83545 0.287
sll1746 Reverse -67 -86 -5.60541 0.298
sll1737 Forward -90 -71 -6.09707 0.3
slr1828 Reverse -160 -179 -6.09707 0.3
slr1829 Reverse -86 -105 -3.83545 0.287
slr1543 Forward -376 -357 0.884433 0.22
sll1468 Reverse -42 -61 -5.31042 0.298
ssr2595 Forward -297 -278 -5.31042 0.298
slr1229 Reverse -229 -248 -5.31042 0.298
slr1232 Reverse -268 -287 -3.44213 0.287
ssr2062 Reverse -3 -22 -2.65548 0.271
slr1443 Reverse -234 -253 -0.197208 0.231
ssr2422 Reverse -349 -368 -3.3438 0.287
slr1448 Forward -250 -231 -5.40875 0.298
sll1281 Reverse -142 -161 1.37609 0.213
sll1281 Forward -393 -374 -5.01543 0.297
slr1362 Forward -209 -190 -2.0655 0.258
slr1363 Reverse -309 -328 -6.1954 0.3
sll0872 Forward -209 -190 -2.55715 0.271
slr1874 Forward -152 -133 10.6192 0.0849
slr1875 Forward -247 -228 -1.18052 0.241
slr1876 Reverse -331 -350 0.982764 0.218
sll1758 Reverse -338 -357 -5.11376 0.297
slr1881 Forward -164 -145 -5.11376 0.297
slr1888 Forward -181 -162 0.0977854 0.225
sll2007 Reverse -150 -169 -4.32711 0.288
sll1692 Forward -239 -220 -3.14714 0.282
slr1819 Reverse -256 -275 -3.14714 0.282
slr1732 Reverse -279 -298 -4.03212 0.287
sll1628 Forward -260 -241 -4.03212 0.287
slr1740 Forward -296 -277 4.62101 0.194
slr1742 Forward -162 -143 -3.24547 0.284
slr1747 Reverse -233 -252 -3.14714 0.282
slr0851 Forward -196 -177 -4.81876 0.297
sll0837 Forward -199 -180 15.4374 0.0652
sll0837 Forward -206 -187 -3.24547 0.284
ssl2296 Forward -126 -107 -4.03212 0.287
slr1255 Reverse -339 -358 -1.18052 0.241
slr1261 Forward -148 -129 -5.9004 0.3
slr2058 Reverse -288 -307 -4.03212 0.287
slr2058 Reverse -7 -26 -5.21209 0.298
sll1906 Forward -101 -82 2.55606 0.194
slr2003 Reverse -18 -37 -1.08219 0.239
sll1613 Reverse -165 -184 -6.09707 0.3
slr1730 Reverse -97 -116 -4.6221 0.297
slr0263 Forward -324 -305 -3.83545 0.287
ssl0438 Reverse -146 -165 -5.01543 0.297
ssl3769 Reverse -20 -39 -5.60541 0.298
slr1508 Reverse -160 -179 -5.11376 0.297
sll2001 Forward -180 -161 -5.9004 0.3
ssr3570 Reverse -204 -223 -5.9004 0.3
slr2121 Reverse -107 -126 0.0977854 0.225
slr2131 Reverse -205 -224 -2.85214 0.274
slr0809 Forward -319 -300 -6.1954 0.3
sll0809 Forward -210 -191 3.24438 0.194
slr0817 Reverse -68 -87 3.24438 0.194
slr0818 Reverse -379 -398 7.27595 0.171
sll0804 Reverse -55 -74 -0.295539 0.234
sll0803 Reverse -69 -88 -5.50708 0.298
sll0803 Forward -137 -118 -5.80207 0.3
sll1894 Forward -329 -310 -5.21209 0.298
sll1891 Reverse -180 -199 -3.83545 0.287
sll1880 Forward -286 -267 -3.73712 0.287
sll1879 Forward -299 -280 11.5042 0.0707
sll1389 Reverse -23 -42 -3.54046 0.287
sll1388 Reverse -237 -256 5.50599 0.194
smr0010 Forward -203 -184 5.50599 0.194
sll1387 Reverse -14 -33 0.0977854 0.225
sll1386 Reverse -82 -101 -5.01543 0.297
sll1382 Forward -157 -138 2.85105 0.194
slr1474 Reverse -274 -293 2.85105 0.194
sll1381 Reverse -79 -98 -3.63879 0.287
sll1377 Reverse -264 -283 -5.11376 0.297
slr1276 Forward -343 -324 -1.86883 0.252
slr1276 Forward -318 -299 -2.65548 0.271
slr1282 Reverse -309 -328 -3.04881 0.281
slr1282 Reverse -310 -329 -6.1954 0.3
sll1555 Forward -79 -60 -2.75381 0.271
slr1004 Reverse -20 -39 -4.91709 0.297
slr0935 Forward -264 -245 -4.91709 0.297
slr0938 Reverse -215 -234 3.34271 0.194
sll0905 Reverse -299 -318 -0.000545616 0.228
slr1626 Reverse -124 -143 -4.91709 0.297
slr1635 Forward -388 -369 2.55606 0.194
slr0291 Forward -149 -130 -5.31042 0.298
sll0257 Forward -176 -157 -5.99873 0.3
slr0293 Reverse -4 -23 -5.99873 0.3
sll0135 Forward -316 -297 -0.688862 0.237
ssl0242 Forward -135 -116 -0.688862 0.237
ssr0256 Reverse -377 -396 -0.688862 0.237
slr1934 Reverse -347 -366 2.45773 0.194
sll1849 Reverse -284 -303 -2.55715 0.271
ssr3300 Reverse -77 -96 -1.67217 0.246
sll1841 Reverse -306 -325 -6.09707 0.3
sll0177 Forward -84 -65 -5.99873 0.3
sll0174 Forward -337 -318 -2.45882 0.271
sll0172 Reverse -179 -198 -4.03212 0.287
slr0184 Forward -252 -233 -0.787193 0.237
slr0369 Reverse -7 -26 -5.40875 0.298
sll0751 Reverse -307 -326 -4.22878 0.287
slr0354 Reverse -355 -374 0.196116 0.225
sll0010 Forward -262 -243 13.5691 0.0652
slr0019 Reverse -200 -219 13.5691 0.0652
sll0002 Reverse -228 -247 3.53937 0.194
slr0213 Forward -309 -290 3.53937 0.194
slr0216 Forward -130 -111 -5.40875 0.298
sll0414 Forward -324 -305 -1.27885 0.244
slr0434 Reverse -42 -61 0.982764 0.218
sll0406 Forward -194 -175 -5.9004 0.3
sll0401 Forward -83 -64 -4.91709 0.297
sll0057 Reverse -295 -314 8.75091 0.14
slr0468 Forward -23 -4 -5.11376 0.297
sll0680 Forward -193 -174 -4.03212 0.287
sll0613 Forward -54 -35 0.491109 0.225
slr0633 Reverse -148 -167 0.491109 0.225
sll0382 Forward -168 -149 -1.37718 0.244
sll0381 Reverse -122 -141 3.44104 0.194
ssr0692 Forward -353 -334 3.44104 0.194
sll0371 Forward -345 -326 -3.73712 0.287
slr0207 Forward -195 -176 -1.57384 0.244
slr0212 Forward -306 -287 -4.52377 0.297
slr0896 Reverse -174 -193 -5.70374 0.298
slr0897 Forward -103 -84 5.30933 0.194
slr0917 Reverse -73 -92 4.03102 0.194
sll0892 Reverse -240 -259 7.37428 0.171
slr0923 Reverse -254 -273 -5.40875 0.298
slr0845 Reverse -285 -304 -2.75381 0.271
sll0485 Forward -103 -84 -5.11376 0.297
sll0484 Reverse -250 -269 -1.86883 0.252
slr0513 Forward -281 -262 1.96607 0.195
sll0595 Forward -293 -274 -1.86883 0.252
sll0586 Reverse -229 -248 -2.75381 0.271
slr0623 Forward -135 -116 -2.75381 0.271
sll0107 Forward -141 -122 -5.60541 0.298
slr0108 Forward -252 -233 -5.70374 0.298
sll0290 Reverse -127 -146 -0.787193 0.237
slr0306 Reverse -309 -328 1.47442 0.212
sll0281 Forward -353 -334 1.86774 0.197
sll0281 Forward -160 -141 1.67108 0.204
sll0670 Forward -322 -303 0.196116 0.225
slr0707 Reverse -241 -260 0.196116 0.225
sll0664 Reverse -297 -316 -5.99873 0.3
slr0710 Forward -390 -371 -5.99873 0.3
sll0043 Reverse -2 -21 -1.57384 0.244
sll0043 Reverse -3 -22 -4.22878 0.287
sll0036 Reverse -14 -33 0.196116 0.225
slr0036 Forward -52 -33 0.196116 0.225
slr0043 Reverse -150 -169 -1.08219 0.239
sll0493 Forward -346 -327 -4.6221 0.297
slr0926 Reverse -22 -41 -5.99873 0.3
sll0900 Forward -145 -126 -4.13045 0.287
ssr1562 Forward -374 -355 -5.99873 0.3
slr0557 Reverse -300 -319 -0.787193 0.237
sll0629 Forward -378 -359 5.30933 0.194
sll0629 Forward -208 -189 2.0644 0.194
slr0653 Reverse -134 -153 5.30933 0.194
slr0653 Reverse -304 -323 2.0644 0.194
slr0657 Forward -229 -210 -5.99873 0.3
sll1488 Forward -353 -334 2.65439 0.194
slr1570 Reverse -10 -29 2.65439 0.194
slr1573 Reverse -189 -208 -5.60541 0.298
ssl2874 Reverse -24 -43 -0.0988766 0.228
slr1575 Forward -281 -262 -0.0988766 0.228
slr0747 Forward -384 -365 -2.75381 0.271
sll0732 Reverse -14 -33 -5.50708 0.298
sll0727 Reverse -75 -94 12.8808 0.0673
sll0726 Forward -360 -341 -1.96717 0.256
slr0758 Reverse -274 -293 -4.03212 0.287
smr0004 Reverse -366 -385 -5.31042 0.298
slr1660 Forward -305 -286 5.01433 0.194
sll1547 Reverse -164 -183 5.60432 0.194
sll0446 Reverse -29 -48 -6.1954 0.3
sll0436 Forward -223 -204 -0.590531 0.237
slr0456 Forward -251 -232 0.196116 0.225
slr0456 Forward -336 -317 -3.3438 0.287
slr1187 Reverse -335 -354 -4.03212 0.287
slr1188 Reverse -340 -359 11.6025 0.0707
sll1107 Forward -332 -313 -4.32711 0.288
slr0593 Reverse -182 -201 2.0644 0.194
slr0593 Reverse -325 -344 -4.22878 0.287
slr0597 Forward -231 -212 -2.85214 0.274
slr0601 Reverse -202 -221 -6.09707 0.3
slr0606 Reverse -275 -294 -3.83545 0.287
slr0608 Forward -68 -49 -5.60541 0.298
slr5037 Reverse -144 -163 -0.983855 0.238
sll5052 Reverse -30 -49 -0.885524 0.237
slr5053 Forward -189 -170 -0.885524 0.237
slr5078 Forward -282 -263 -4.91709 0.297
sll5084 Forward -307 -288 -0.590531 0.237
sll5109 Forward -48 -29 0.392778 0.225
ssr5120 Forward -263 -244 -5.01543 0.297
sll7006 Reverse -159 -178 -1.67217 0.246
sll7027 Forward -82 -63 -6.1954 0.3
sll7033 Forward -389 -370 2.26107 0.194
sll7034 Forward -60 -41 2.26107 0.194
sll7047 Reverse -284 -303 -4.72043 0.297
ssl7048 Reverse -12 -31 -4.72043 0.297
slr7049 Forward -193 -174 -4.72043 0.297
sll7055 Forward -400 -381 3.44104 0.194
ssl8008 Forward -273 -254 4.52268 0.194
slr6007 Reverse -238 -257 -5.70374 0.298
slr6031 Forward -121 -102 7.57094 0.171
slr6039 Forward -300 -281 0.786102 0.222
slr6066 Reverse -238 -257 -5.70374 0.298
slr6090 Forward -121 -102 13.5691 0.0652
6803t06 Forward -377 -358 -4.42544 0.293
6803t12 Forward -171 -152 -5.01543 0.297
6803t31 Forward -251 -232 -6.09707 0.3
6803t36 Forward -141 -122 -5.70374 0.298
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.143 0.000 0.857 0.000
0.214 0.786 0.000 0.000
0.643 0.000 0.357 0.000
0.000 0.000 1.000 0.000
0.429 0.000 0.571 0.000
0.000 0.071 0.929 0.000
0.143 0.000 0.786 0.071
0.000 0.000 1.000 0.000
0.929 0.071 0.000 0.000
0.143 0.857 0.000 0.000
0.143 0.000 0.000 0.857
0.000 0.286 0.071 0.643
0.000 0.214 0.786 0.000
1.000 0.000 0.000 0.000
0.857 0.000 0.143 0.000
0.000 0.786 0.214 0.000