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Details for NP_441436.1_2

Name NP_441436.1_2
Length 20
Regular expression G[AC][AGT]GG[CT]CAGCAGTGGTGGGA
Central No

Motif logo

Genes containing this motif

221 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Reverse -29 -48 -6.1954 0.296
sll1392 Forward -144 -125 -4.22878 0.28
sll1056 Forward -189 -170 -5.80207 0.294
sll1053 Forward -175 -156 -0.197208 0.277
slr1123 Reverse -94 -113 -0.197208 0.277
sll0712 Reverse -66 -85 -6.29373 0.296
slr0732 Forward -218 -199 9.0459 0.188
slr1006 Forward -126 -107 -4.22878 0.28
slr0733 Reverse -56 -75 -4.22878 0.28
slr0742 Reverse -122 -141 -6.58872 0.296
sll1321 Forward -298 -279 10.0292 0.163
sll1321 Forward -253 -234 -5.11376 0.294
slr1103 Reverse -152 -171 2.94938 0.217
slr1107 Forward -212 -193 -4.52377 0.286
slr1780 Reverse -249 -268 -5.21209 0.294
sll1671 Forward -382 -363 -4.6221 0.29
ssr3000 Forward -57 -38 -0.688862 0.277
sll1664 Reverse -199 -218 -4.22878 0.28
sll1194 Forward -395 -376 -6.78538 0.296
sll0943 Forward -282 -263 -0.000545616 0.277
sll0943 Forward -279 -260 -5.21209 0.294
slr0974 Reverse -371 -390 4.22769 0.199
slr1077 Reverse -229 -248 -5.9004 0.294
slr1079 Reverse -204 -223 -4.52377 0.286
sll1023 Forward -284 -265 -5.60541 0.294
sll0639 Forward -106 -87 -5.70374 0.294
sll0635 Forward -297 -278 -3.63879 0.28
slr1594 Reverse -118 -137 -0.885524 0.277
slr1761 Forward -353 -334 -5.99873 0.296
ssr3451 Forward -373 -354 -3.04881 0.28
ssr3451 Forward -244 -225 -5.99873 0.296
slr1914 Reverse -315 -334 -4.91709 0.294
slr1030 Reverse -117 -136 -6.88371 0.296
sll1300 Forward -106 -87 -6.39206 0.296
sll1298 Reverse -341 -360 -6.68705 0.296
slr1383 Forward -326 -307 -6.68705 0.296
sll1290 Forward -175 -156 -5.70374 0.294
slr1398 Reverse -104 -123 -6.78538 0.296
sll1579 Forward -98 -79 11.6025 0.163
sll1911 Forward -218 -199 -1.96717 0.28
sll1078 Forward -260 -241 -6.98204 0.296
ssl3446 Reverse -334 -353 -3.3438 0.28
sll1817 Reverse -26 -45 6.88262 0.19
sll1803 Forward -96 -77 -4.03212 0.28
slr1194 Forward -287 -268 -2.95047 0.28
sll1738 Reverse -87 -106 0.687771 0.275
slr1835 Reverse -158 -177 -0.885524 0.277
slr1835 Reverse -155 -174 -5.9004 0.294
slr1842 Reverse -213 -232 -3.93378 0.28
sll1469 Forward -354 -335 6.29264 0.19
sll1466 Forward -143 -124 -5.40875 0.294
sll1462 Forward -120 -101 -6.09707 0.296
sll1634 Forward -373 -354 -5.60541 0.294
sll1633 Reverse -223 -242 -6.39206 0.296
slr1752 Forward -287 -268 -5.11376 0.294
slr1363 Forward -188 -169 -0.0988766 0.277
slr1364 Reverse -47 -66 -2.75381 0.28
slr1365 Forward -162 -143 4.62101 0.196
slr1366 Reverse -116 -135 -5.21209 0.294
slr1368 Forward -57 -38 -5.70374 0.294
sll0871 Forward -200 -181 -0.983855 0.277
slr0884 Reverse -116 -135 -0.983855 0.277
sll0860 Reverse -324 -343 -6.98204 0.296
slr1859 Reverse -109 -128 2.0644 0.221
slr1878 Reverse -26 -45 -7.08038 0.297
sll1764 Reverse -381 -400 -6.49039 0.296
sll2014 Forward -137 -118 -6.98204 0.296
sll2008 Forward -395 -376 -6.39206 0.296
sll1692 Forward -187 -168 -4.22878 0.28
slr1819 Reverse -308 -327 -4.22878 0.28
slr1735 Forward -233 -214 -6.39206 0.296
slr1742 Forward -155 -136 -2.45882 0.28
slr0853 Reverse -251 -270 -6.1954 0.296
sll0847 Reverse -365 -384 0.58944 0.275
sll0839 Reverse -26 -45 -3.73712 0.28
slr0869 Forward -153 -134 2.75272 0.217
sll1154 Forward -204 -185 -4.91709 0.294
sll1154 Reverse -11 -30 -5.40875 0.294
sll1961 Reverse -188 -207 -2.0655 0.28
slr1994 Forward -270 -251 -1.96717 0.28
slr1998 Reverse -291 -310 -6.68705 0.296
ssr3402 Forward -379 -360 -6.58872 0.296
sll1586 Forward -378 -359 -2.36049 0.28
sll1586 Forward -329 -310 -5.40875 0.294
sll0240 Reverse -358 -377 -2.55715 0.28
sll1988 Reverse -263 -282 -5.21209 0.294
ssl2781 Forward -203 -184 -6.78538 0.296
sll2001 Forward -22 -3 -3.14714 0.28
ssr3570 Reverse -362 -381 -3.14714 0.28
sll1236 Forward -400 -381 -2.85214 0.28
slr0820 Forward -227 -208 -1.67217 0.28
sll1899 Reverse -15 -34 -5.40875 0.294
sll1891 Reverse -117 -136 -4.81876 0.294
sll1888 Reverse -104 -123 -5.80207 0.294
slr1972 Forward -396 -377 -5.80207 0.294
sll1883 Reverse -266 -285 -5.70374 0.294
sll1879 Reverse -106 -125 2.26107 0.221
sll1388 Reverse -372 -391 -6.88371 0.296
smr0010 Forward -68 -49 -6.88371 0.296
slr1468 Forward -132 -113 -2.55715 0.28
slr1468 Forward -121 -102 -4.91709 0.294
slr1472 Reverse -270 -289 -4.32711 0.283
slr1267 Reverse -151 -170 -3.63879 0.28
slr1282 Reverse -296 -315 -0.39387 0.277
sll1446 Reverse -9 -28 -6.88371 0.296
sll1440 Forward -363 -344 12.0942 0.163
slr1530 Reverse -27 -46 -6.39206 0.296
sll1099 Forward -254 -235 -3.63879 0.28
slr0958 Forward -49 -30 -5.80207 0.294
slr0958 Reverse -286 -305 -6.98204 0.296
sll0905 Reverse -292 -311 -2.36049 0.28
slr0960 Reverse -323 -342 -5.99873 0.296
sll1521 Reverse -193 -212 -1.86883 0.28
sll0426 Reverse -353 -372 0.294447 0.277
sll0269 Reverse -37 -56 0.58944 0.275
slr0288 Reverse -293 -312 -4.13045 0.28
slr0401 Reverse -247 -266 -3.44213 0.28
slr0408 Forward -114 -95 -6.29373 0.296
slr0146 Reverse -185 -204 -0.688862 0.277
sll0145 Reverse -274 -293 2.65439 0.217
sll0142 Reverse -13 -32 7.07928 0.19
sll1845 Reverse -278 -297 -5.31042 0.294
slr0323 Forward -311 -292 -5.40875 0.294
sll0327 Forward -336 -317 0.392778 0.277
sll0766 Forward -308 -289 -5.9004 0.294
sll0761 Reverse -345 -364 -3.93378 0.28
sll0759 Reverse -161 -180 -6.88371 0.296
sll0755 Reverse -214 -233 -5.80207 0.294
slr0355 Reverse -41 -60 7.96426 0.188
slr0008 Reverse -204 -223 -0.39387 0.277
ssl0020 Reverse -276 -295 -5.50708 0.294
slr0016 Forward -187 -168 -5.50708 0.294
sll0005 Reverse -362 -381 4.12936 0.199
sll0198 Reverse -342 -361 -6.39206 0.296
slr0233 Forward -147 -128 -5.60541 0.294
slr0431 Forward -292 -273 -6.39206 0.296
sll0409 Forward -202 -183 -6.58872 0.296
sll0065 Forward -83 -64 -3.44213 0.28
ssr0109 Reverse -99 -118 -3.44213 0.28
slr0053 Reverse -292 -311 -3.44213 0.28
slr0055 Reverse -145 -164 4.52268 0.196
slr0056 Reverse -70 -89 -6.58872 0.296
slr0064 Forward -80 -61 -6.98204 0.296
slr0065 Reverse -21 -40 -4.13045 0.28
sll0462 Reverse -24 -43 -2.85214 0.28
slr0483 Reverse -104 -123 -4.72043 0.293
sll0683 Forward -363 -344 -6.58872 0.296
sll0614 Reverse -45 -64 5.60432 0.19
sll0614 Reverse -381 -400 -2.45882 0.28
sll0614 Reverse -81 -100 -6.98204 0.296
slr0650 Reverse -325 -344 4.52268 0.196
sll0394 Reverse -235 -254 -5.80207 0.294
slr0416 Forward -154 -135 11.0125 0.163
slr0418 Reverse -115 -134 -2.65548 0.28
sll0384 Forward -363 -344 5.80098 0.19
sll0373 Forward -330 -311 -6.98204 0.296
sll0369 Forward -49 -30 -4.13045 0.28
sll0189 Reverse -380 -399 3.24438 0.217
ssr0330 Forward -368 -349 -2.45882 0.28
slr0899 Forward -114 -95 -0.295539 0.277
slr0918 Reverse -247 -266 -1.57384 0.28
slr0575 Reverse -315 -334 -6.98204 0.296
slr0825 Forward -370 -351 -3.83545 0.28
slr0082 Reverse -110 -129 -0.295539 0.277
slr0498 Forward -298 -279 -6.88371 0.296
slr0500 Forward -341 -322 2.26107 0.221
sll0596 Forward -289 -270 2.65439 0.217
sll0586 Forward -190 -171 -3.83545 0.28
slr0623 Reverse -174 -193 -3.83545 0.28
sll0585 Forward -226 -207 -5.31042 0.294
slr0624 Forward -210 -191 -6.98204 0.296
sll0284 Reverse -11 -30 -2.0655 0.28
slr0314 Forward -288 -269 -3.54046 0.28
slr0795 Forward -149 -130 6.09597 0.19
sll0794 Forward -112 -93 0.294447 0.277
sll0790 Forward -295 -276 -6.09707 0.296
sll0776 Forward -129 -110 -1.57384 0.28
sll0659 Forward -218 -199 -5.31042 0.294
sll0034 Reverse -221 -240 -6.58872 0.296
slr0542 Reverse -238 -257 -6.78538 0.296
sll0497 Forward -225 -206 0.0977854 0.277
sll0497 Forward -95 -76 -0.983855 0.277
slr0545 Reverse -82 -101 -0.983855 0.277
slr0925 Forward -275 -256 -1.86883 0.28
slr0926 Reverse -219 -238 -2.36049 0.28
slr0930 Reverse -300 -319 10.6192 0.163
sll0896 Forward -109 -90 -3.04881 0.28
sll0537 Reverse -56 -75 -2.36049 0.28
sll0529 Forward -320 -301 -6.39206 0.296
sll0520 Reverse -143 -162 2.45773 0.221
sll1334 Reverse -327 -346 -0.39387 0.277
slr1431 Reverse -278 -297 -6.49039 0.296
slr1457 Reverse -246 -265 5.40766 0.19
sll0630 Reverse -314 -333 -3.83545 0.28
sll0622 Reverse -333 -352 -1.08219 0.279
slr1573 Reverse -50 -69 3.04771 0.217
ssl2874 Reverse -18 -37 -5.11376 0.294
slr1575 Forward -287 -268 -5.11376 0.294
sll1486 Reverse -326 -345 -5.01543 0.294
sll0735 Reverse -93 -112 -2.65548 0.28
slr0748 Forward -73 -54 -2.65548 0.28
slr1653 Forward -302 -283 2.16274 0.221
slr1664 Forward -189 -170 -2.55715 0.28
ssr2781 Reverse -287 -306 -3.14714 0.28
slr0458 Reverse -317 -336 -5.50708 0.294
sll0430 Reverse -91 -110 1.27776 0.251
slr1176 Forward -240 -221 1.27776 0.251
slr1187 Reverse -194 -213 3.04771 0.217
slr0593 Reverse -221 -240 -4.13045 0.28
slr0608 Forward -77 -58 -5.70374 0.294
ssl5001 Forward -385 -366 -7.08038 0.297
sll5002 Forward -179 -160 -1.67217 0.28
ssr5020 Reverse -168 -187 -7.08038 0.297
sll5047 Forward -210 -191 -5.21209 0.294
sll5062 Reverse -301 -320 1.67108 0.243
sll5080 Forward -389 -370 -4.03212 0.28
sll7067 Reverse -349 -368 -5.9004 0.294
sll8033 Forward -395 -376 -6.1954 0.296
slr6043 Forward -159 -140 -3.93378 0.28
slr6044 Reverse -159 -178 -6.58872 0.296
sll6052 Forward -76 -57 -4.52377 0.286
sll6055 Reverse -187 -206 -7.08038 0.297
slr6057 Forward -281 -262 -7.08038 0.297
slr6097 Forward -106 -87 3.44104 0.217
slr6107 Reverse -265 -284 0.786102 0.275
6803t01 Forward -293 -274 -3.44213 0.28
6803t15 Reverse -116 -135 -5.21209 0.294
6803t16 Reverse -87 -106 -3.14714 0.28
6803t19 Reverse -63 -82 -6.88371 0.296
6803t24 Forward -247 -228 -0.787193 0.277
6803t39 Forward -242 -223 -6.1954 0.296
6803r03 Forward -371 -352 7.96426 0.188
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.571 0.429 0.000 0.000
0.286 0.143 0.286 0.286
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.143 0.429 0.143 0.286
0.000 0.857 0.143 0.000
0.857 0.000 0.143 0.000
0.143 0.000 0.857 0.000
0.000 0.857 0.143 0.000
1.000 0.000 0.000 0.000
0.143 0.000 0.857 0.000
0.143 0.000 0.000 0.857
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.143 0.857
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000