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Details for NP_441421.1_6

Name NP_441421.1_6
Length 18
Regular expression [TG][TAC][AG]A[AG]AAA[ACG][TC][TA]TA[CG]A[AT][TA][TA]
Central Yes

Motif logo

Genes containing this motif

113 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -27 -44 14.6624 0.212
sll1204 Forward -340 -323 12.9436 0.224
slr1116 Forward -321 -304 15.9038 0.212
sll1062 Forward -20 -3 10.6517 0.279
sll0710 Reverse -26 -43 10.2698 0.28
slr0734 Reverse -281 -298 9.88781 0.28
slr0241 Forward -369 -352 10.4608 0.279
sll0934 Reverse -166 -183 13.994 0.212
slr1064 Forward -149 -132 16.7632 0.21
slr1064 Forward -24 -7 10.9382 0.279
slr1068 Forward -274 -257 11.6067 0.277
slr1069 Forward -220 -203 10.7472 0.279
sll0643 Forward -75 -58 14.7579 0.212
slr0687 Reverse -231 -248 14.7579 0.212
ssr1155 Reverse -8 -25 10.2698 0.28
slr0689 Reverse -225 -242 10.2698 0.28
sll1515 Forward -128 -111 9.41035 0.3
slr1597 Reverse -215 -232 9.41035 0.3
sll1514 Reverse -258 -275 13.994 0.212
sll1511 Reverse -51 -68 11.0337 0.279
sll1505 Forward -32 -15 10.3653 0.28
ssr3129 Forward -33 -16 15.7128 0.212
slr2034 Forward -131 -114 12.2751 0.272
smr0008 Reverse -23 -40 12.1796 0.272
slr2035 Reverse -227 -244 12.1796 0.272
sll1920 Forward -171 -154 9.88781 0.28
slr2023 Reverse -18 -35 9.88781 0.28
sll1797 Reverse -207 -224 16.8587 0.21
sll1786 Forward -334 -317 10.4608 0.279
ssr2016 Forward -127 -110 13.5165 0.219
slr1211 Forward -111 -94 11.4157 0.277
sll1455 Forward -342 -325 9.50584 0.3
ssr2047 Reverse -324 -341 18.2911 0.197
slr1241 Reverse -194 -211 11.7022 0.277
sll1308 Reverse -200 -217 11.6067 0.277
slr1406 Forward -192 -175 11.6067 0.277
sll1305 Reverse -281 -298 9.79232 0.282
slr1864 Reverse -277 -294 11.3202 0.278
sll2012 Reverse -336 -353 15.2354 0.212
sll2012 Forward -223 -206 13.5165 0.219
ssl3829 Reverse -376 -393 18.1001 0.197
ssl3829 Forward -106 -89 10.6517 0.279
sml0007 Reverse -18 -35 18.1001 0.197
slr2141 Forward -62 -45 18.1001 0.197
slr2141 Reverse -332 -349 10.6517 0.279
slr1734 Forward -360 -343 9.69683 0.289
sll1621 Forward -132 -115 11.0337 0.279
slr1738 Reverse -179 -196 11.0337 0.279
ssr2078 Reverse -229 -246 17.1452 0.21
sll1949 Reverse -158 -175 9.88781 0.28
slr2067 Forward -189 -172 9.88781 0.28
sll1908 Reverse -168 -185 10.4608 0.279
slr1990 Forward -93 -76 10.4608 0.279
slr0264 Reverse -242 -259 11.4157 0.277
slr2083 Reverse -370 -387 16.2858 0.212
sll1994 Forward -48 -31 10.9382 0.279
slr2130 Reverse -363 -380 10.9382 0.279
sll1239 Reverse -333 -350 24.7846 0.00304
slr1322 Forward -113 -96 24.7846 0.00304
sll1890 Reverse -81 -98 13.039 0.224
sll1890 Reverse -63 -80 11.5112 0.277
slr1969 Forward -111 -94 13.039 0.224
slr1969 Forward -129 -112 11.5112 0.277
slr1152 Forward -204 -187 9.9833 0.28
sll1094 Forward -238 -221 12.9436 0.224
sll1564 Forward -97 -80 10.7472 0.279
ssr2802 Reverse -263 -280 10.7472 0.279
sll1555 Reverse -278 -295 9.88781 0.28
ssr2831 Forward -300 -283 9.88781 0.28
slr0946 Forward -190 -173 10.4608 0.279
slr1638 Reverse -172 -189 9.9833 0.28
sll1530 Reverse -174 -191 15.1399 0.212
sll1520 Forward -303 -286 12.9436 0.224
sll0355 Forward -59 -42 10.6517 0.279
slr0407 Reverse -373 -390 17.6227 0.197
sll1852 Reverse -26 -43 13.994 0.212
sll1852 Reverse -25 -42 10.6517 0.279
sll0297 Reverse -142 -159 13.994 0.212
sll0293 Forward -39 -22 11.6067 0.277
slr0338 Reverse -190 -207 11.6067 0.277
slr0364 Forward -314 -297 12.3706 0.269
slr0364 Reverse -18 -35 10.1743 0.28
sll0767 Reverse -8 -25 10.0788 0.28
sll0325 Forward -261 -244 10.7472 0.279
slr0650 Reverse -95 -112 9.41035 0.3
sll0372 Reverse -8 -25 9.60133 0.297
ssl0353 Forward -157 -140 14.4714 0.212
slr0897 Reverse -178 -195 13.803 0.219
sll0549 Reverse -3 -20 13.421 0.219
slr0569 Forward -293 -276 13.421 0.219
slr0082 Reverse -343 -360 17.8136 0.197
sll0486 Reverse -139 -156 9.50584 0.3
sll0593 Reverse -14 -31 10.0788 0.28
slr0615 Forward -193 -176 10.0788 0.28
sll0586 Reverse -66 -83 15.7128 0.212
slr0623 Forward -298 -281 15.7128 0.212
slr0298 Forward -212 -195 23.6386 0.0092
slr0302 Forward -126 -109 13.7075 0.219
sll0047 Forward -332 -315 10.5563 0.279
sll0494 Forward -395 -378 11.4157 0.277
slr0927 Forward -122 -105 9.9833 0.28
sll1491 Forward -71 -54 14.0895 0.212
slr1568 Forward -134 -117 10.1743 0.28
sll1477 Forward -230 -213 11.8931 0.277
sll1473 Reverse -18 -35 10.1743 0.28
slr0749 Forward -85 -68 13.994 0.212
sll1547 Forward -328 -311 11.3202 0.278
slr1187 Reverse -46 -63 10.2698 0.28
slr5012 Reverse -59 -76 13.3255 0.221
sll5081 Reverse -278 -295 10.4608 0.279
slr5082 Forward -212 -195 10.4608 0.279
slr5111 Forward -75 -58 13.994 0.212
slr7016 Forward -30 -13 11.9886 0.277
ssr6024 Reverse -363 -380 9.41035 0.3
ssr6030 Forward -164 -147 9.79232 0.282
slr6044 Forward -28 -11 11.9886 0.277
slr6045 Forward -106 -89 10.8427 0.279
ssr6083 Reverse -363 -380 9.41035 0.3
ssr6089 Forward -164 -147 9.79232 0.282
slr6105 Forward -177 -160 11.6067 0.277
6803t26 Forward -199 -182 13.994 0.212
6803t26 Forward -200 -183 10.6517 0.279
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.200  0.800  
0.300 0.200 0.100 0.400
0.800 0.000 0.200 0.000
1.000 0.000 0.000 0.000
0.700 0.000 0.300 0.000
0.900 0.100 0.000 0.000
0.900 0.000 0.100 0.000
1.000 0.000 0.000 0.000
0.300 0.300 0.300 0.100
0.000 0.200 0.000 0.800
0.200 0.000 0.000 0.800
0.000 0.000 0.000 1.000
1.000 0.000 0.000 0.000
0.100 0.700 0.200 0.000
0.900 0.000 0.100 0.000
0.500 0.000 0.000 0.500
0.300 0.000 0.000 0.700
0.200 0.100 0.000 0.700