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Details for NP_441418.1_1

Name NP_441418.1_1
Length 20
Regular expression [TC][AC]T[AT][GA]AA[AG]A[AC][AG]G[TAG][TG]AA[AC][GT][TC]T
Central Yes

Motif logo

Genes containing this motif

118 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0727 Reverse -285 -304 7.30471 0.275
sll0700 Forward -85 -66 10.074 0.205
slr1411 Reverse -186 -205 11.3154 0.203
sll1318 Reverse -112 -131 7.20922 0.275
slr1306 Reverse -178 -197 7.20922 0.275
slr1064 Forward -37 -18 10.9334 0.205
slr1064 Forward -152 -133 8.83258 0.252
slr1066 Forward -312 -293 10.1695 0.205
ssr1766 Reverse -190 -209 12.1748 0.203
sll0651 Forward -85 -66 10.074 0.205
sll1515 Forward -130 -111 16.5674 0.0628
slr1597 Reverse -213 -232 16.5674 0.0628
sll1009 Forward -278 -259 6.92274 0.282
slr1055 Reverse -210 -229 6.92274 0.282
slr1771 Forward -129 -110 6.92274 0.282
sll1930 Forward -85 -66 10.074 0.205
sll1832 Reverse -304 -323 10.4559 0.205
ssr2848 Reverse -350 -369 8.6416 0.256
sll1572 Forward -110 -91 9.69201 0.205
ssl2084 Forward -400 -381 11.3154 0.203
slr1234 Forward -142 -123 8.06865 0.275
slr1442 Forward -168 -149 7.97315 0.275
slr0877 Reverse -46 -65 9.50102 0.214
slr1866 Forward -347 -328 8.35512 0.258
sll2013 Forward -164 -145 11.9838 0.203
sll1689 Forward -258 -239 23.3474 0.0245
sll1621 Forward -134 -115 7.68668 0.275
slr1738 Reverse -177 -196 7.68668 0.275
slr0857 Forward -85 -66 10.074 0.205
slr1257 Forward -221 -202 7.78217 0.275
sll1959 Forward -144 -125 8.73709 0.252
sll1908 Reverse -166 -185 7.68668 0.275
slr1990 Forward -95 -76 7.68668 0.275
slr1716 Forward -85 -66 10.074 0.205
slr0271 Forward -125 -106 12.2703 0.203
sll1984 Forward -85 -66 10.074 0.205
slr2113 Forward -85 -66 10.074 0.205
slr2126 Forward -28 -9 7.30471 0.275
ssr2194 Forward -214 -195 8.35512 0.258
sll1236 Reverse -164 -183 7.20922 0.275
slr1325 Forward -207 -188 7.20922 0.275
slr1332 Reverse -268 -287 7.97315 0.275
sll1220 Forward -225 -206 23.7293 0.0245
sll1220 Reverse -351 -370 13.5117 0.153
ssl1507 Forward -355 -336 7.49569 0.275
sll1257 Forward -85 -66 10.074 0.205
slr1340 Forward -273 -254 13.8937 0.151
ssl2471 Forward -238 -219 14.5621 0.122
slr1283 Forward -106 -87 12.5568 0.198
sll1437 Forward -85 -66 10.074 0.205
sll1094 Forward -240 -221 11.0289 0.205
slr1161 Reverse -184 -203 16.5674 0.0628
slr1673 Reverse -24 -43 9.88299 0.205
sll1561 Reverse -110 -129 11.3154 0.203
slr1681 Forward -240 -221 11.3154 0.203
slr1691 Reverse -157 -176 9.69201 0.205
slr0442 Reverse -83 -102 6.73176 0.282
sll0266 Reverse -75 -94 8.54611 0.258
sll1852 Reverse -23 -42 9.69201 0.205
sll1851 Reverse -371 -390 10.074 0.205
slr1937 Forward -85 -66 10.074 0.205
slr0325 Forward -63 -44 6.54077 0.295
sll0327 Forward -206 -187 7.4002 0.275
slr0386 Reverse -110 -129 7.4002 0.275
sll0751 Reverse -285 -304 7.20922 0.275
sll0201 Forward -85 -66 10.074 0.205
sll0194 Forward -357 -338 11.3154 0.203
slr0229 Reverse -36 -55 11.3154 0.203
slr0049 Forward -211 -192 6.73176 0.282
slr0917 Forward -73 -54 7.11373 0.28
slr0617 Forward -178 -159 13.2252 0.165
sll0783 Forward -172 -153 7.01823 0.282
slr0801 Reverse -293 -312 7.01823 0.282
slr0699 Reverse -97 -116 16.4719 0.0628
smr0002 Forward -85 -66 9.7875 0.205
slr0704 Forward -246 -227 9.7875 0.205
sll0672 Reverse -69 -88 20.0051 0.0521
sll0047 Forward -345 -326 9.69201 0.205
sll0030 Forward -78 -59 17.8088 0.0628
slr0040 Reverse -175 -194 17.8088 0.0628
sll0506 Forward -264 -245 6.73176 0.282
slr0927 Forward -124 -105 9.69201 0.205
sll1367 Reverse -101 -120 6.82725 0.282
slr1452 Forward -128 -109 6.82725 0.282
slr0665 Forward -293 -274 6.82725 0.282
sll0450 Reverse -143 -162 13.5117 0.153
sll0450 Reverse -381 -400 7.78217 0.275
slr0449 Forward -284 -265 13.5117 0.153
slr0449 Forward -46 -27 7.78217 0.275
ssr0817 Reverse -334 -353 10.074 0.205
slr0597 Reverse -295 -314 17.0449 0.0628
ssl5007 Forward -88 -69 17.1404 0.0628
slr5018 Forward -62 -43 12.4613 0.198
ssr5019 Forward -390 -371 12.4613 0.198
slr5071 Reverse -79 -98 8.45061 0.258
ssl5091 Forward -88 -69 17.1404 0.0628
ssr5092 Reverse -284 -303 17.1404 0.0628
ssr5117 Reverse -65 -84 9.21455 0.227
slr5118 Reverse -301 -320 9.21455 0.227
ssl7020 Forward -117 -98 7.49569 0.275
slr7025 Forward -155 -136 11.6018 0.203
sll7090 Forward -120 -101 20.9601 0.0401
slr7091 Reverse -4 -23 20.9601 0.0401
slr7092 Reverse -369 -388 20.9601 0.0401
slr7105 Forward -85 -66 10.074 0.205
sll8035 Forward -90 -71 8.35512 0.258
slr8036 Reverse -1 -20 8.35512 0.258
sll8042 Forward -85 -66 10.074 0.205
slr8044 Reverse -344 -363 10.074 0.205
slr8046 Forward -85 -66 10.074 0.205
ssr6002 Forward -88 -69 17.1404 0.0628
sll6017 Reverse -215 -234 7.49569 0.275
ssr6019 Forward -294 -275 7.49569 0.275
ssr6030 Reverse -80 -99 11.6018 0.203
ssl6061 Reverse -228 -247 17.1404 0.0628
ssr6062 Forward -88 -69 17.1404 0.0628
sll6076 Reverse -215 -234 7.49569 0.275
ssr6078 Forward -294 -275 7.49569 0.275
ssr6089 Reverse -80 -99 11.6018 0.203
6803t26 Forward -202 -183 9.69201 0.205
6803r02 Forward -146 -127 11.7928 0.203
6803r05 Forward -146 -127 11.7928 0.203
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.100  0.300  0.000  0.600  
0.700 0.300 0.000 0.000
0.000 0.000 0.100 0.900
0.500 0.000 0.000 0.500
0.400 0.000 0.600 0.000
1.000 0.000 0.000 0.000
0.900 0.000 0.100 0.000
0.600 0.000 0.400 0.000
1.000 0.000 0.000 0.000
0.800 0.200 0.000 0.000
0.600 0.100 0.300 0.000
0.100 0.100 0.800 0.000
0.300 0.100 0.200 0.400
0.000 0.000 0.200 0.800
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
0.700 0.300 0.000 0.000
0.100 0.000 0.600 0.300
0.100 0.200 0.000 0.700
0.000 0.000 0.000 1.000