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Details for NP_441410.1_3

Name NP_441410.1_3
Length 20
Regular expression A[TA][TG][AC][AC][AG][CA]A[GA]G[GA][CA]GAT[CA][GT]C[AC]T
Central No

Motif logo

Genes containing this motif

224 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1493 Forward -379 -360 9.83255 0.191
slr1493 Reverse -352 -371 4.81767 0.261
sll1394 Reverse -227 -246 8.94757 0.21
sll1057 Reverse -55 -74 4.03102 0.293
slr1125 Forward -337 -318 13.5691 0.154
slr1125 Reverse -310 -329 11.7008 0.174
slr0721 Reverse -347 -366 8.84924 0.21
slr0722 Forward -100 -81 4.81767 0.261
slr0724 Reverse -81 -100 8.84924 0.21
slr0727 Reverse -323 -342 9.83255 0.191
slr0728 Forward -223 -204 15.3391 0.121
slr0237 Forward -87 -68 11.7008 0.174
sll0228 Forward -66 -47 4.22769 0.282
sll0227 Forward -367 -348 4.71934 0.267
ssl0410 Reverse -49 -68 5.99764 0.23
sgl0002 Forward -279 -260 6.68596 0.23
sml0004 Forward -147 -128 6.68596 0.23
slr0254 Reverse -18 -37 6.68596 0.23
sll0218 Forward -354 -335 4.32602 0.28
slr1096 Forward -83 -64 7.7676 0.225
sll1031 Reverse -157 -176 8.06259 0.218
slr1777 Reverse -222 -241 6.19431 0.23
sll1676 Forward -242 -223 4.62101 0.268
slr1787 Reverse -358 -377 4.62101 0.268
sll1671 Reverse -278 -297 10.8159 0.185
slr1790 Forward -64 -45 10.8159 0.185
sll1201 Reverse -29 -48 11.2092 0.185
slr1291 Forward -197 -178 11.2092 0.185
slr0984 Reverse -182 -201 7.7676 0.225
slr1619 Reverse -289 -308 5.01433 0.259
slr1065 Forward -86 -67 12.6841 0.154
slr1079 Forward -210 -191 6.78429 0.23
ssr1768 Forward -128 -109 10.7175 0.188
slr1081 Forward -104 -85 6.09597 0.23
slr1090 Forward -393 -374 4.03102 0.293
slr0680 Forward -161 -142 5.50599 0.236
slr0686 Reverse -261 -280 16.5191 0.121
slr1594 Forward -111 -92 15.2408 0.121
sll1510 Reverse -275 -294 9.73422 0.191
smr0005 Forward -253 -234 3.83436 0.295
sll1006 Reverse -206 -225 9.93088 0.191
slr1763 Forward -243 -224 8.75091 0.21
ssr2962 Reverse -277 -296 4.916 0.261
sll1942 Reverse -78 -97 12.4875 0.154
slr2042 Reverse -33 -52 6.09597 0.23
slr1910 Reverse -300 -319 9.3409 0.196
slr1032 Forward -189 -170 3.93269 0.295
sll0985 Forward -329 -310 6.68596 0.23
slr1037 Reverse -101 -120 6.68596 0.23
ssl2542 Reverse -91 -110 6.4893 0.23
slr1398 Reverse -367 -386 7.47261 0.228
slr1708 Forward -168 -149 9.63589 0.192
slr2012 Reverse -228 -247 8.25926 0.21
sll1917 Forward -68 -49 4.12936 0.288
slr2030 Reverse -148 -167 13.4708 0.154
ssl3451 Reverse -341 -360 17.3057 0.121
sll1808 Forward -73 -54 4.22769 0.282
sll1802 Forward -224 -205 4.03102 0.293
sll1123 Reverse -332 -351 13.1758 0.154
sll1118 Forward -353 -334 4.62101 0.268
slr1198 Reverse -165 -184 4.62101 0.268
slr1198 Reverse -21 -40 4.62101 0.268
slr1200 Reverse -371 -390 5.11266 0.252
slr2070 Reverse -297 -316 3.83436 0.295
sll1968 Forward -348 -329 6.19431 0.23
sll1740 Forward -176 -157 5.89931 0.23
sll1724 Reverse -240 -259 11.0125 0.185
sll1715 Forward -223 -204 5.211 0.251
sll1461 Reverse -368 -387 12.7825 0.154
sll1362 Forward -267 -248 5.60432 0.236
sll1353 Forward -288 -269 9.43923 0.192
sll1280 Reverse -197 -216 9.73422 0.191
slr1356 Forward -197 -178 9.73422 0.191
sll1271 Reverse -250 -269 6.09597 0.23
sll1766 Forward -137 -118 11.0125 0.185
sll1760 Forward -103 -84 3.83436 0.295
slr1880 Reverse -157 -176 3.83436 0.295
sll2015 Forward -164 -145 6.09597 0.23
sll2012 Forward -262 -243 5.50599 0.236
slr1803 Forward -144 -125 16.6174 0.121
slr1808 Reverse -333 -352 6.09597 0.23
slr1811 Reverse -229 -248 11.7008 0.174
sll1631 Forward -381 -362 6.68596 0.23
sll1628 Forward -145 -126 8.35759 0.21
slr1734 Reverse -19 -38 8.35759 0.21
sll1625 Reverse -157 -176 7.17762 0.23
sll1624 Forward -72 -53 4.22769 0.282
slr1747 Reverse -120 -139 6.19431 0.23
sll0842 Reverse -131 -150 7.96426 0.219
slr1255 Forward -136 -117 4.52268 0.272
sll1957 Forward -58 -39 3.83436 0.295
slr2057 Reverse -314 -333 3.83436 0.295
slr1994 Reverse -237 -256 16.3224 0.121
slr1999 Reverse -137 -156 6.09597 0.23
slr2004 Forward -63 -44 5.99764 0.23
ssr2898 Forward -209 -190 5.80098 0.23
slr1731 Forward -194 -175 8.55425 0.21
sll0253 Reverse -380 -399 10.3242 0.191
ssl0461 Forward -216 -197 6.78429 0.23
slr0270 Reverse -115 -134 6.19431 0.23
sll0236 Forward -398 -379 13.5691 0.154
slr2083 Reverse -80 -99 4.916 0.261
slr2094 Reverse -269 -288 7.27595 0.229
slr2099 Reverse -362 -381 4.81767 0.261
slr2107 Forward -257 -238 6.09597 0.23
slr2117 Reverse -270 -289 5.80098 0.23
slr2125 Forward -130 -111 4.32602 0.28
slr1332 Forward -100 -81 20.649 0.121
ssl2420 Forward -267 -248 4.32602 0.28
slr0804 Forward -62 -43 8.65258 0.21
ssr1391 Reverse -27 -46 4.81767 0.261
sll0803 Forward -231 -212 4.916 0.261
slr1347 Reverse -359 -378 4.62101 0.268
slr1984 Reverse -275 -294 4.81767 0.261
slr1471 Reverse -371 -390 6.68596 0.23
sll1172 Reverse -166 -185 12.8808 0.154
slr1279 Forward -117 -98 12.8808 0.154
sll1166 Reverse -122 -141 10.0292 0.191
sll1442 Forward -114 -95 10.9142 0.185
slr1530 Reverse -158 -177 3.93269 0.295
sll1103 Reverse -24 -43 9.53756 0.192
sll1096 Forward -204 -185 5.11266 0.252
slr1173 Forward -267 -248 5.80098 0.23
ssr2806 Forward -138 -119 9.43923 0.192
sll0921 Reverse -299 -318 5.80098 0.23
slr0941 Forward -334 -315 9.93088 0.191
slr0943 Reverse -348 -367 5.89931 0.23
slr0944 Reverse -373 -392 11.3075 0.185
slr0949 Reverse -361 -380 10.9142 0.185
ssr1600 Reverse -75 -94 8.84924 0.21
slr0959 Forward -369 -350 5.89931 0.23
sll1522 Forward -364 -345 5.80098 0.23
sll0426 Forward -51 -32 16.9124 0.121
slr0444 Reverse -137 -156 16.9124 0.121
sll0418 Reverse -116 -135 13.1758 0.154
sll0271 Reverse -190 -209 15.1424 0.121
sll0264 Reverse -47 -66 20.059 0.121
sll0149 Reverse -347 -366 8.25926 0.21
sll0149 Forward -374 -355 5.50599 0.236
slr0164 Forward -293 -274 17.2074 0.121
sll0136 Reverse -85 -104 7.37428 0.229
slr1934 Forward -246 -227 6.29264 0.23
slr0329 Forward -270 -251 5.11266 0.252
slr0360 Reverse -198 -217 9.43923 0.192
slr0388 Forward -94 -75 5.50599 0.236
slr0770 Forward -107 -88 7.17762 0.23
sll0764 Forward -298 -279 5.50599 0.236
slr0343 Reverse -182 -201 5.50599 0.236
sll0020 Forward -238 -219 10.3242 0.191
sll0006 Forward -197 -178 7.86593 0.222
slr0230 Reverse -92 -111 15.0441 0.121
ssl0788 Forward -34 -15 5.80098 0.23
slr0435 Forward -176 -157 5.50599 0.236
slr0049 Forward -142 -123 8.35759 0.21
slr0050 Forward -125 -106 8.55425 0.21
sll0067 Forward -165 -146 11.8975 0.174
ssr0109 Reverse -198 -217 5.211 0.251
slr0492 Forward -184 -165 9.53756 0.192
slr0496 Reverse -125 -144 6.4893 0.23
sll0615 Forward -147 -128 9.73422 0.191
slr0639 Forward -85 -66 4.42435 0.276
slr0643 Forward -278 -259 11.7008 0.174
slr0643 Reverse -251 -270 6.09597 0.23
sll0606 Reverse -79 -98 5.70265 0.233
slr0644 Forward -38 -19 5.70265 0.233
sll0603 Forward -392 -373 7.27595 0.229
sll0603 Reverse -365 -384 4.42435 0.276
slr0645 Reverse -173 -192 7.27595 0.229
sll0397 Forward -253 -234 10.9142 0.185
sll0397 Reverse -226 -245 10.2259 0.191
sll0383 Reverse -270 -289 9.0459 0.21
sll0383 Forward -297 -278 5.11266 0.252
sll0380 Forward -119 -100 4.12936 0.288
sll0376 Reverse -251 -270 4.81767 0.261
slr0196 Forward -134 -115 8.35759 0.21
sll0178 Reverse -122 -141 6.78429 0.23
slr0845 Reverse -345 -364 9.93088 0.191
sll0821 Reverse -208 -227 15.5357 0.121
slr0847 Forward -241 -222 15.5357 0.121
slr0079 Reverse -334 -353 5.80098 0.23
slr0081 Forward -263 -244 6.39097 0.23
slr0503 Forward -90 -71 5.89931 0.23
sll0478 Forward -369 -350 8.45592 0.21
sll0467 Forward -170 -151 4.42435 0.276
sll0588 Forward -188 -169 10.6192 0.191
slr0099 Forward -328 -309 12.9791 0.154
slr0104 Reverse -373 -392 5.99764 0.23
sll0775 Reverse -198 -217 6.39097 0.23
ssr1169 Forward -25 -6 6.39097 0.23
slr0697 Forward -356 -337 6.39097 0.23
sll0033 Forward -266 -247 7.57094 0.226
sll0033 Reverse -239 -258 5.89931 0.23
slr0044 Reverse -193 -212 7.27595 0.229
sll0503 Reverse -169 -188 3.93269 0.295
ssr1558 Reverse -298 -317 3.93269 0.295
sll0528 Reverse -80 -99 5.80098 0.23
slr0556 Forward -50 -31 5.80098 0.23
sll1496 Forward -186 -167 4.22769 0.282
slr1562 Reverse -83 -102 7.96426 0.219
slr1665 Forward -48 -29 9.93088 0.191
slr0453 Forward -322 -303 9.83255 0.191
slr0453 Reverse -317 -336 6.09597 0.23
slr1186 Forward -324 -305 6.4893 0.23
slr0585 Forward -309 -290 12.5858 0.154
sll0564 Forward -227 -208 7.07928 0.23
sll0564 Forward -30 -11 6.39097 0.23
slr0598 Reverse -15 -34 6.39097 0.23
slr0599 Reverse -160 -179 7.07928 0.23
slr0599 Reverse -357 -376 6.39097 0.23
slr5038 Forward -67 -48 6.29264 0.23
sll5047 Reverse -363 -382 5.40766 0.241
sll5052 Reverse -381 -400 7.57094 0.226
slr5054 Forward -323 -304 7.57094 0.226
sll5081 Reverse -379 -398 7.57094 0.226
slr5082 Forward -111 -92 7.57094 0.226
sll5123 Reverse -102 -121 8.35759 0.21
slr5124 Forward -33 -14 8.35759 0.21
slr7012 Forward -176 -157 3.93269 0.295
ssl7019 Forward -31 -12 5.89931 0.23
sll7031 Forward -307 -288 10.8159 0.185
sll7064 Reverse -231 -250 8.06259 0.218
ssl7074 Forward -135 -116 7.47261 0.228
slr7081 Forward -169 -150 11.7008 0.174
slr7098 Forward -168 -149 4.32602 0.28
slr6008 Reverse -176 -195 9.83255 0.191
slr6009 Forward -245 -226 8.65258 0.21
slr6014 Forward -311 -292 14.6508 0.124
ssr6027 Reverse -284 -303 12.4875 0.154
slr6050 Forward -145 -126 5.30933 0.247
sll6059 Forward -292 -273 4.52268 0.272
slr6067 Reverse -176 -195 9.83255 0.191
slr6068 Forward -245 -226 8.65258 0.21
slr6073 Forward -311 -292 14.6508 0.124
ssr6086 Reverse -284 -303 12.4875 0.154
6803t21 Forward -356 -337 12.8808 0.154
6803t22 Forward -137 -118 8.25926 0.21
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.875  0.000  0.125  0.000  
0.250 0.000 0.000 0.750
0.000 0.000 0.250 0.750
0.625 0.250 0.125 0.000
0.500 0.375 0.125 0.000
0.750 0.000 0.250 0.000
0.375 0.625 0.000 0.000
0.875 0.125 0.000 0.000
0.375 0.000 0.625 0.000
0.000 0.000 1.000 0.000
0.250 0.000 0.750 0.000
0.250 0.625 0.125 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.375 0.625 0.000 0.000
0.125 0.000 0.625 0.250
0.125 0.750 0.125 0.000
0.625 0.250 0.125 0.000
0.000 0.125 0.000 0.875