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Details for NP_441394.1_10

Name NP_441394.1_10
Length 19
Regular expression CCAA[TC]CC[AT][CA]C[CT][CG]C[AC][AG][CG][AGT]CC
Central Yes

Motif logo

Genes containing this motif

64 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1214 Forward -315 -297 14.3747 0.238
sll1049 Reverse -307 -325 9.35981 0.263
sll1321 Reverse -356 -374 14.0797 0.238
sll1321 Reverse -209 -227 8.86816 0.263
sll1676 Forward -293 -275 13.588 0.238
slr1787 Reverse -307 -325 13.588 0.238
slr1087 Reverse -364 -382 9.26148 0.263
slr1090 Forward -306 -288 10.1465 0.263
slr1046 Reverse -294 -312 18.7012 0.115
ssr1736 Reverse -351 -369 8.96649 0.263
ssr3451 Reverse -134 -152 8.17984 0.298
ssr3410 Reverse -90 -108 18.8979 0.115
slr2011 Reverse -355 -373 18.8979 0.115
slr1146 Forward -345 -327 9.85146 0.263
slr1206 Reverse -357 -375 9.45814 0.263
slr1535 Forward -236 -218 9.26148 0.263
slr1537 Reverse -264 -282 11.1298 0.263
sll1132 Reverse -4 -22 11.6214 0.263
slr1240 Reverse -246 -264 9.94979 0.263
slr1364 Forward -198 -180 12.3097 0.263
slr0887 Forward -205 -187 9.55647 0.263
slr1857 Forward -145 -127 9.26148 0.263
slr1861 Reverse -263 -281 13.7847 0.238
sll1775 Forward -27 -9 10.9331 0.263
sll1761 Reverse -282 -300 10.1465 0.263
sll2013 Reverse -220 -238 10.2448 0.263
sll1708 Forward -377 -359 13.0964 0.257
slr0868 Forward -309 -291 8.86816 0.263
slr1991 Reverse -338 -356 11.8181 0.263
slr1994 Reverse -279 -297 16.5379 0.202
sll1429 Reverse -87 -105 9.6548 0.263
slr2107 Reverse -110 -128 12.8997 0.257
slr2108 Reverse -23 -41 24.0111 0.0397
sll1255 Reverse -266 -284 9.35981 0.263
sll1873 Reverse -159 -177 11.2281 0.263
smr0011 Forward -356 -338 14.2763 0.238
sll1101 Reverse -98 -116 9.94979 0.263
ssr1951 Forward -397 -379 11.6214 0.263
slr0954 Reverse -351 -369 9.06482 0.263
slr1645 Forward -121 -103 9.06482 0.263
sll0270 Reverse -351 -369 8.96649 0.263
slr0293 Forward -342 -324 8.96649 0.263
slr0151 Reverse -200 -218 9.16315 0.263
sll0328 Reverse -38 -56 14.2763 0.238
slr0344 Forward -185 -167 11.9164 0.263
sll0023 Forward -121 -103 14.6697 0.238
sll0021 Forward -252 -234 8.3765 0.287
sll0402 Reverse -266 -284 14.3747 0.238
slr0637 Reverse -227 -245 8.86816 0.263
slr0427 Reverse -358 -376 12.4081 0.263
slr0509 Forward -318 -300 10.3431 0.263
ssl0511 Forward -218 -200 9.26148 0.263
sll0788 Reverse -16 -34 9.35981 0.263
slr0799 Forward -206 -188 9.35981 0.263
slr1459 Reverse -359 -377 9.45814 0.263
slr1572 Reverse -317 -335 11.7197 0.263
sll1472 Reverse -192 -210 10.7364 0.263
slr1664 Forward -290 -272 11.2281 0.263
slr1189 Forward -40 -22 9.16315 0.263
sll0574 Reverse -220 -238 8.6715 0.273
slr0593 Forward -310 -292 8.3765 0.287
slr0600 Forward -283 -265 12.8997 0.257
sll7064 Reverse -359 -377 11.7197 0.263
slr6001 Reverse -338 -356 11.9164 0.263
slr6039 Reverse -16 -34 9.35981 0.263
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 0.857 0.000 0.143
0.857 0.000 0.143 0.000
0.857 0.000 0.000 0.143
0.000 0.429 0.000 0.571
0.143 0.857 0.000 0.000
0.143 0.857 0.000 0.000
0.571 0.000 0.000 0.429
0.286 0.429 0.143 0.143
0.000 1.000 0.000 0.000
0.000 0.429 0.143 0.429
0.000 0.571 0.429 0.000
0.000 0.857 0.000 0.143
0.714 0.286 0.000 0.000
0.714 0.000 0.286 0.000
0.000 0.571 0.429 0.000
0.286 0.143 0.286 0.286
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000