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Details for NP_441317.1_4

Name NP_441317.1_4
Length 15
Regular expression [GT][TA][TA]TTT[TC][TG][CG][GT][CT]T[AT]TT
Central No

Motif logo

Genes containing this motif

308 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -345 -331 11.6603 0.249
sll1205 Forward -134 -120 11.7557 0.248
sll1204 Forward -160 -146 11.1828 0.259
slr1125 Forward -233 -219 12.1377 0.23
slr0723 Forward -19 -5 14.525 0.161
slr0731 Forward -83 -69 12.6152 0.217
sll0704 Reverse -232 -246 11.4693 0.252
sll0700 Reverse -55 -69 16.2438 0.136
slr0245 Reverse -313 -327 11.2783 0.257
sll0219 Forward -355 -341 11.2783 0.257
sll0216 Reverse -40 -54 10.2279 0.29
sll1321 Reverse -123 -137 9.65494 0.29
slr1413 Forward -76 -62 9.65494 0.29
slr1416 Forward -24 -10 11.1828 0.259
slr1094 Forward -20 -6 9.36847 0.297
slr1097 Forward -276 -262 11.6603 0.249
slr1103 Forward -279 -265 9.94142 0.29
slr1104 Forward -115 -101 13.6656 0.168
slr1789 Forward -40 -26 17.0077 0.136
sll1666 Reverse -307 -321 15.6709 0.161
slr1306 Forward -51 -37 10.1324 0.29
sll1187 Forward -158 -144 9.55945 0.29
ssr1604 Forward -209 -195 10.1324 0.29
slr0971 Reverse -346 -360 11.3738 0.253
sll0930 Reverse -360 -374 10.1324 0.29
slr0978 Forward -191 -177 10.5144 0.289
slr0980 Reverse -357 -371 9.36847 0.297
slr0982 Forward -62 -48 10.9918 0.266
slr1611 Forward -151 -137 11.8512 0.244
slr1065 Reverse -306 -320 11.6603 0.249
slr1071 Forward -114 -100 14.0475 0.161
slr0682 Forward -330 -316 15.0979 0.161
sll0651 Reverse -55 -69 16.2438 0.136
sll0635 Reverse -28 -42 9.27298 0.297
smr0005 Reverse -352 -366 16.5303 0.136
sll1507 Forward -16 -2 13.4746 0.175
slr1603 Reverse -30 -44 13.4746 0.175
ssl2920 Forward -389 -375 9.55945 0.29
sll1504 Reverse -268 -282 9.65494 0.29
slr1052 Reverse -10 -24 13.3791 0.18
sll1005 Forward -397 -383 11.1828 0.259
sll1005 Forward -321 -307 10.3234 0.29
sll1647 Forward -211 -197 13.0926 0.191
slr1762 Reverse -374 -388 14.143 0.161
slr1849 Forward -309 -295 11.0873 0.262
sll1749 Forward -215 -201 16.2438 0.136
slr2036 Reverse -52 -66 14.0475 0.161
slr2036 Forward -359 -345 11.8512 0.244
ssr3467 Forward -41 -27 13.3791 0.18
slr2046 Forward -121 -107 9.27298 0.297
slr2052 Forward -220 -206 19.8725 0.136
sll1930 Reverse -55 -69 16.2438 0.136
sll1837 Reverse -237 -251 12.3287 0.228
slr1912 Forward -28 -14 12.3287 0.228
slr1918 Forward -344 -330 9.55945 0.29
sll1297 Forward -94 -80 9.65494 0.29
sll1584 Reverse -277 -291 9.84592 0.29
slr2013 Forward -285 -271 10.0369 0.29
slr2018 Forward -62 -48 9.94142 0.29
slr2025 Forward -313 -299 13.8565 0.168
sll1084 Reverse -277 -291 9.55945 0.29
slr1136 Forward -36 -22 9.55945 0.29
slr1138 Forward -259 -245 9.46396 0.294
sll1079 Reverse -342 -356 10.6099 0.289
sll1076 Forward -245 -231 18.8221 0.136
slr1145 Forward -165 -151 14.6205 0.161
slr1147 Reverse -294 -308 11.8512 0.244
sll1803 Forward -326 -312 10.2279 0.29
sll1803 Reverse -28 -42 10.2279 0.29
ssl3432 Forward -32 -18 10.2279 0.29
slr1204 Reverse -96 -110 12.9016 0.201
ssr2016 Reverse -145 -159 11.4693 0.252
ssr2016 Reverse -323 -337 9.46396 0.294
slr2071 Forward -92 -78 11.5648 0.249
sll1965 Forward -258 -244 10.6099 0.289
slr2076 Reverse -273 -287 10.6099 0.289
sll1742 Forward -134 -120 11.4693 0.252
slr1550 Forward -23 -9 10.5144 0.289
sll1143 Reverse -62 -76 17.2942 0.136
sll1143 Reverse -60 -74 9.84592 0.29
slr1230 Reverse -66 -80 13.0926 0.191
ssl2250 Forward -370 -356 10.7053 0.284
ssr2062 Reverse -92 -106 10.0369 0.29
sll1362 Reverse -282 -296 9.65494 0.29
slr1450 Forward -282 -268 14.2385 0.161
slr1450 Forward -138 -124 9.55945 0.29
sll1350 Forward -325 -311 11.3738 0.253
sll1276 Forward -27 -13 10.1324 0.29
slr1369 Forward -26 -12 15.3844 0.161
sll0871 Reverse -326 -340 9.36847 0.297
slr0889 Forward -355 -341 9.84592 0.29
sll1306 Forward -134 -120 10.3234 0.29
sll1785 Forward -148 -134 14.716 0.161
sll1785 Forward -147 -133 13.952 0.164
slr1854 Reverse -275 -289 9.65494 0.29
sll1780 Reverse -51 -65 14.143 0.161
sll1780 Reverse -53 -67 14.0475 0.161
slr1863 Forward -51 -37 14.143 0.161
slr1863 Forward -49 -35 14.0475 0.161
sll2012 Forward -286 -272 17.0077 0.136
sll1694 Forward -383 -369 13.5701 0.174
sll1628 Reverse -366 -380 11.4693 0.252
sll1625 Reverse -71 -85 9.84592 0.29
slr0857 Reverse -55 -69 16.2438 0.136
sll1154 Forward -348 -334 15.5754 0.161
slr1247 Reverse -268 -282 15.5754 0.161
slr1257 Reverse -200 -214 12.7107 0.213
slr1262 Reverse -209 -223 9.65494 0.29
sll1958 Reverse -72 -86 10.4189 0.29
slr1716 Reverse -55 -69 16.2438 0.136
slr1717 Forward -200 -186 9.36847 0.297
sll1606 Reverse -27 -41 10.5144 0.289
sll1592 Forward -305 -291 11.9467 0.241
sll0237 Reverse -348 -362 16.7213 0.136
ssl0438 Reverse -4 -18 16.7213 0.136
sll0236 Reverse -229 -243 10.0369 0.29
slr2080 Reverse -96 -110 13.2836 0.181
slr2088 Forward -241 -227 19.1085 0.136
sll1985 Reverse -349 -363 13.7611 0.168
sll1984 Reverse -55 -69 16.2438 0.136
ssl3769 Forward -250 -236 10.3234 0.29
sll1418 Reverse -343 -357 15.4799 0.161
slr1516 Forward -112 -98 9.36847 0.297
sll1997 Reverse -51 -65 14.143 0.161
sll1997 Reverse -53 -67 14.0475 0.161
slr2110 Forward -145 -131 14.143 0.161
slr2110 Forward -143 -129 14.0475 0.161
slr2113 Reverse -55 -69 16.2438 0.136
slr2114 Reverse -349 -363 13.7611 0.168
sll1236 Reverse -303 -317 13.6656 0.168
slr1325 Forward -68 -54 13.6656 0.168
sll1233 Forward -229 -215 11.7557 0.248
sll1233 Forward -135 -121 10.1324 0.29
sll1231 Reverse -346 -360 11.6603 0.249
sll1226 Forward -375 -361 11.0873 0.262
slr1334 Forward -298 -284 15.0979 0.161
sll0808 Reverse -21 -35 16.2438 0.136
slr0821 Forward -400 -386 16.2438 0.136
sll1261 Forward -154 -140 14.8115 0.161
sll1258 Forward -124 -110 15.0024 0.161
sll1257 Reverse -55 -69 16.2438 0.136
sll1255 Reverse -51 -65 14.143 0.161
sll1255 Reverse -53 -67 14.0475 0.161
sll1252 Reverse -337 -351 15.4799 0.161
slr1349 Forward -92 -78 9.46396 0.294
ssr3341 Forward -248 -234 11.5648 0.249
sll1883 Reverse -78 -92 11.5648 0.249
sll1384 Forward -67 -53 9.27298 0.297
sll1373 Forward -151 -137 10.8008 0.277
sll1373 Forward -362 -348 9.27298 0.297
slr1282 Reverse -229 -243 11.7557 0.248
sll1441 Forward -389 -375 11.3738 0.253
sll1437 Reverse -55 -69 16.2438 0.136
sll1435 Reverse -32 -46 9.55945 0.29
sll1103 Forward -213 -199 9.65494 0.29
sll1086 Reverse -322 -336 13.2836 0.181
sll1560 Reverse -51 -65 14.143 0.161
slr1683 Forward -135 -121 14.143 0.161
sll1556 Forward -133 -119 13.6656 0.168
slr1692 Forward -31 -17 12.5197 0.22
sll1532 Forward -316 -302 14.143 0.161
sll1532 Forward -314 -300 14.0475 0.161
ssl2982 Forward -72 -58 14.143 0.161
ssl2982 Forward -70 -56 14.0475 0.161
slr1635 Reverse -51 -65 14.143 0.161
slr1635 Reverse -53 -67 14.0475 0.161
sll1531 Reverse -62 -76 10.0369 0.29
slr1646 Reverse -50 -64 9.46396 0.294
sll0428 Forward -361 -347 12.1377 0.23
ssr0756 Reverse -298 -312 12.1377 0.23
sll0423 Reverse -354 -368 10.1324 0.29
sll0260 Reverse -275 -289 10.5144 0.289
ssr0482 Forward -15 -1 10.5144 0.289
slr0287 Forward -304 -290 10.5144 0.289
slr0288 Forward -85 -71 13.952 0.164
slr0392 Reverse -159 -173 14.6205 0.161
slr0408 Forward -312 -298 9.27298 0.297
slr0142 Reverse -130 -144 14.4295 0.161
ssl0259 Reverse -2 -16 12.3287 0.228
sll0135 Reverse -380 -394 10.3234 0.29
ssl0242 Reverse -199 -213 10.3234 0.29
ssr0256 Forward -313 -299 10.3234 0.29
slr1925 Forward -121 -107 11.5648 0.249
sll1863 Reverse -266 -280 11.5648 0.249
slr1937 Reverse -55 -69 16.2438 0.136
sll1845 Reverse -305 -319 9.84592 0.29
sll0944 Reverse -333 -347 11.5648 0.249
slr0328 Forward -19 -5 10.1324 0.29
sll0176 Reverse -90 -104 9.94142 0.29
sll0171 Forward -81 -67 11.6603 0.249
sll0169 Forward -162 -148 14.525 0.161
sll0168 Forward -98 -84 9.55945 0.29
sll0167 Reverse -319 -333 10.2279 0.29
slr0180 Reverse -51 -65 14.143 0.161
slr0180 Reverse -53 -67 14.0475 0.161
slr0364 Forward -157 -143 9.27298 0.297
slr0377 Forward -25 -11 18.9176 0.136
slr0379 Forward -91 -77 10.4189 0.29
sll0754 Forward -108 -94 9.55945 0.29
sll0319 Forward -54 -40 9.65494 0.29
slr0348 Reverse -223 -237 9.65494 0.29
sll0315 Reverse -51 -65 14.143 0.161
sll0315 Reverse -53 -67 14.0475 0.161
slr0353 Forward -73 -59 14.143 0.161
slr0353 Forward -71 -57 14.0475 0.161
slr0358 Reverse -35 -49 9.94142 0.29
sll0024 Forward -53 -39 18.0581 0.136
slr0001 Forward -351 -337 15.3844 0.161
sll0202 Reverse -160 -174 12.5197 0.22
sll0201 Reverse -55 -69 16.2438 0.136
slr0233 Forward -353 -339 16.2438 0.136
slr0054 Reverse -81 -95 13.4746 0.175
slr0477 Forward -388 -374 10.2279 0.29
sll0686 Reverse -191 -205 9.65494 0.29
sll0682 Forward -266 -252 10.4189 0.29
slr0637 Reverse -321 -335 9.94142 0.29
slr0643 Reverse -290 -304 11.0873 0.262
sll0602 Forward -98 -84 17.3897 0.136
slr0645 Reverse -33 -47 17.3897 0.136
sll0180 Forward -22 -8 12.1377 0.23
slr0204 Reverse -235 -249 12.1377 0.23
slr0897 Forward -365 -351 13.4746 0.175
slr0907 Forward -115 -101 13.952 0.164
slr0912 Reverse -54 -68 10.2279 0.29
sll0891 Reverse -327 -341 16.1483 0.136
ssl1690 Reverse -71 -85 16.1483 0.136
ssl1690 Reverse -159 -173 10.8963 0.27
slr0921 Forward -312 -298 16.1483 0.136
slr0921 Forward -224 -210 10.8963 0.27
slr0922 Reverse -303 -317 9.75043 0.29
sll0549 Forward -143 -129 12.5197 0.22
slr0569 Reverse -153 -167 12.5197 0.22
ssl1046 Forward -162 -148 11.3738 0.253
slr0573 Reverse -35 -49 11.3738 0.253
slr0829 Reverse -145 -159 9.27298 0.297
sll0834 Reverse -272 -286 9.65494 0.29
sll0825 Forward -87 -73 14.2385 0.161
sll0825 Forward -77 -63 9.55945 0.29
ssr1425 Reverse -10 -24 14.2385 0.161
ssr1425 Reverse -20 -34 9.55945 0.29
slr0844 Reverse -377 -391 14.2385 0.161
sll0821 Forward -108 -94 12.9016 0.201
slr0847 Reverse -341 -355 12.9016 0.201
sll0082 Forward -396 -382 15.3844 0.161
slr0081 Reverse -350 -364 15.3844 0.161
slr0083 Forward -140 -126 17.6762 0.136
slr0500 Forward -374 -360 13.1881 0.186
slr0511 Reverse -150 -164 15.9573 0.149
sll0478 Forward -172 -158 9.55945 0.29
sll0585 Forward -177 -163 10.2279 0.29
sll0096 Forward -378 -364 9.46396 0.294
slr0300 Forward -220 -206 9.36847 0.297
sll0280 Reverse -66 -80 9.46396 0.294
slr0700 Reverse -215 -229 14.6205 0.161
sll0677 Forward -203 -189 15.7664 0.161
smr0002 Reverse -55 -69 16.2438 0.136
slr0704 Reverse -216 -230 16.2438 0.136
ssr1176 Reverse -87 -101 13.7611 0.168
sll0672 Forward -256 -242 12.2332 0.23
sll0741 Forward -216 -202 12.4242 0.224
sll0741 Forward -51 -37 9.27298 0.297
sll0739 Forward -112 -98 14.143 0.161
sll0037 Forward -33 -19 9.84592 0.29
slr0042 Reverse -16 -30 9.84592 0.29
sll0517 Forward -77 -63 18.1536 0.136
slr0525 Reverse -225 -239 18.1536 0.136
slr0542 Forward -177 -163 10.2279 0.29
sll0897 Forward -203 -189 13.1881 0.186
sll0896 Reverse -9 -23 13.2836 0.181
sll0895 Forward -145 -131 10.9918 0.266
slr0546 Reverse -288 -302 10.9918 0.266
sll0533 Reverse -374 -388 12.1377 0.23
slr0549 Forward -120 -106 12.1377 0.23
slr1424 Forward -144 -130 15.2889 0.161
sll1336 Forward -53 -39 10.5144 0.289
slr1428 Reverse -133 -147 10.5144 0.289
slr1454 Forward -391 -377 9.46396 0.294
sll1366 Reverse -213 -227 9.27298 0.297
sll0621 Forward -29 -15 17.0077 0.136
sll0621 Forward -28 -14 12.0422 0.236
ssr1114 Reverse -256 -270 17.0077 0.136
ssr1114 Reverse -257 -271 12.0422 0.236
slr1567 Forward -22 -8 9.27298 0.297
slr1579 Reverse -274 -288 15.4799 0.161
slr1579 Reverse -284 -298 13.8565 0.168
sll1474 Reverse -51 -65 14.143 0.161
sll1474 Reverse -53 -67 14.0475 0.161
sll1549 Forward -291 -277 12.2332 0.23
slr1655 Reverse -214 -228 12.2332 0.23
slr1657 Forward -209 -195 9.75043 0.29
sll1545 Reverse -183 -197 9.84592 0.29
sll1543 Forward -364 -350 10.0369 0.29
slr1667 Reverse -77 -91 10.0369 0.29
sll0444 Reverse -327 -341 9.84592 0.29
slr0456 Reverse -11 -25 9.94142 0.29
slr0459 Forward -380 -366 10.9918 0.266
ssr0817 Forward -364 -350 16.2438 0.136
slr1183 Forward -214 -200 9.27298 0.297
slr1186 Forward -21 -7 12.6152 0.217
slr0589 Forward -39 -25 13.2836 0.181
slr0610 Forward -73 -59 10.8963 0.27
sll5030 Forward -314 -300 11.2783 0.257
ssl5031 Forward -172 -158 11.2783 0.257
sll5052 Forward -341 -327 11.1828 0.259
slr5054 Reverse -363 -377 11.1828 0.259
ssl5125 Forward -68 -54 14.2385 0.161
sll5131 Reverse -51 -65 14.143 0.161
sll5131 Reverse -53 -67 14.0475 0.161
slr7008 Reverse -51 -65 14.143 0.161
slr7008 Reverse -53 -67 14.0475 0.161
slr7011 Forward -359 -345 13.8565 0.168
ssl7038 Forward -332 -318 9.84592 0.29
ssl7039 Forward -31 -17 9.84592 0.29
ssr7040 Reverse -87 -101 9.84592 0.29
slr7041 Reverse -329 -343 9.84592 0.29
slr7060 Reverse -10 -24 14.143 0.161
sll7070 Reverse -51 -65 14.0475 0.161
slr7071 Forward -81 -67 14.0475 0.161
slr7073 Forward -379 -365 13.6656 0.168
sll7085 Reverse -137 -151 16.2438 0.136
slr7105 Reverse -55 -69 16.2438 0.136
slr8016 Reverse -233 -247 12.4242 0.224
ssl8041 Reverse -349 -363 13.7611 0.168
sll8042 Reverse -55 -69 16.2438 0.136
slr8044 Forward -374 -360 16.2438 0.136
slr8046 Reverse -55 -69 16.2438 0.136
slr6110 Reverse -40 -54 9.55945 0.29
slr6012 Forward -52 -38 16.8168 0.136
ssr6030 Reverse -339 -353 9.55945 0.29
slr6031 Reverse -249 -263 10.3234 0.29
slr6042 Forward -256 -242 10.8963 0.27
slr6051 Reverse -294 -308 10.2279 0.29
sll6054 Reverse -353 -367 14.716 0.161
slr6056 Forward -209 -195 14.716 0.161
slr6071 Forward -52 -38 16.8168 0.136
ssr6089 Reverse -339 -353 9.55945 0.29
slr6090 Reverse -249 -263 10.3234 0.29
slr6105 Reverse -51 -65 14.143 0.161
slr6105 Reverse -53 -67 14.0475 0.161
6803t01 Reverse -60 -74 9.36847 0.297
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.111  0.667  0.222  
0.222 0.000 0.111 0.667
0.333 0.000 0.000 0.667
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.333 0.111 0.556
0.000 0.000 0.444 0.556
0.111 0.556 0.333 0.000
0.000 0.111 0.556 0.333
0.000 0.778 0.000 0.222
0.000 0.000 0.111 0.889
0.778 0.000 0.000 0.222
0.000 0.000 0.111 0.889
0.111 0.000 0.000 0.889