Your browser is old and dusty. Try Google Chrome!

Details for NP_441307.1_4

Name NP_441307.1_4
Length 20
Regular expression GCC[AC]TGAT[CT]GG[CGT]GG[TC]GG[CT]TT
Central No

Motif logo

Genes containing this motif

115 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1063 Reverse -327 -346 2.85105 0.219
slr1128 Reverse -121 -140 2.75272 0.219
sll1036 Reverse -82 -101 -1.57384 0.29
slr1106 Reverse -282 -301 1.27776 0.236
sll1678 Forward -246 -227 -1.27885 0.283
sll1656 Forward -396 -377 7.96426 0.177
slr1303 Reverse -27 -46 2.85105 0.219
slr1619 Forward -156 -137 4.71934 0.214
slr1755 Reverse -297 -316 4.12936 0.214
slr1847 Forward -166 -147 4.12936 0.214
slr2032 Reverse -207 -226 3.73603 0.218
slr2045 Reverse -263 -282 7.86593 0.177
sll1934 Reverse -310 -329 1.57275 0.236
sll1299 Reverse -36 -55 -1.57384 0.29
sll1296 Reverse -69 -88 6.29264 0.177
sll1289 Reverse -157 -176 1.37609 0.236
slr1391 Reverse -2 -21 -0.983855 0.273
slr1395 Forward -175 -156 4.52268 0.214
sll1925 Reverse -158 -177 1.37609 0.236
slr2006 Forward -57 -38 1.37609 0.236
slr2007 Forward -398 -379 1.37609 0.236
sll1076 Forward -160 -141 4.32602 0.214
sll1808 Reverse -92 -111 -0.197208 0.257
slr1201 Forward -289 -270 -1.37718 0.283
sll1734 Reverse -130 -149 11.1109 0.122
sll1733 Reverse -72 -91 6.58763 0.177
slr1535 Reverse -215 -234 -0.000545616 0.249
sll1758 Reverse -271 -290 -1.08219 0.273
slr1881 Forward -231 -212 -1.08219 0.273
sll1703 Reverse -213 -232 4.42435 0.214
slr1807 Forward -335 -316 4.42435 0.214
sll1630 Forward -371 -352 0.196116 0.249
slr1253 Forward -270 -251 -0.197208 0.257
slr1260 Reverse -172 -191 -0.295539 0.259
sll1606 Forward -215 -196 1.27776 0.236
sll0253 Forward -218 -199 5.50599 0.206
slr1509 Forward -339 -320 13.7658 0.122
slr2127 Forward -202 -183 -0.39387 0.26
sll1237 Reverse -294 -313 -0.787193 0.272
ssl1520 Forward -364 -345 0.982764 0.238
ssl3573 Reverse -309 -328 1.67108 0.236
sll1890 Reverse -299 -318 -1.67217 0.293
slr1969 Reverse -326 -345 -0.4922 0.264
ssl3549 Reverse -299 -318 8.16093 0.177
sll1390 Reverse -306 -325 -0.688862 0.271
slr1679 Forward -162 -143 -0.000545616 0.249
slr1649 Reverse -279 -298 -0.000545616 0.249
slr0392 Reverse -305 -324 -0.39387 0.26
slr0394 Forward -98 -79 3.24438 0.218
sll0147 Forward -395 -376 4.52268 0.214
slr1944 Reverse -58 -77 -1.08219 0.273
sll1841 Forward -347 -328 1.17943 0.238
sll0298 Forward -218 -199 1.27776 0.236
slr0333 Reverse -253 -272 0.196116 0.249
slr0168 Reverse -344 -363 2.94938 0.219
sll0167 Reverse -284 -303 3.34271 0.218
sll0329 Reverse -96 -115 1.76941 0.236
slr0783 Reverse -261 -280 0.58944 0.246
slr0346 Forward -395 -376 0.884433 0.242
slr0347 Reverse -181 -200 8.35759 0.177
sll0002 Reverse -358 -377 0.0977854 0.249
slr0213 Forward -179 -160 0.0977854 0.249
sll0207 Reverse -102 -121 -0.885524 0.273
slr0220 Forward -56 -37 -0.885524 0.273
sll0205 Reverse -113 -132 2.0644 0.236
slr0436 Reverse -160 -179 11.2092 0.122
slr0055 Forward -192 -173 -0.983855 0.273
slr0067 Reverse -331 -350 11.0125 0.122
sll0379 Reverse -192 -211 -1.7705 0.298
slr0575 Forward -318 -299 -1.08219 0.273
slr0582 Forward -254 -235 3.73603 0.218
sll0833 Reverse -239 -258 0.58944 0.246
sll0082 Forward -230 -211 -0.295539 0.259
sll0478 Reverse -379 -398 3.53937 0.218
slr0112 Reverse -209 -228 -0.787193 0.272
ssl0172 Forward -197 -178 -0.688862 0.271
slr0795 Forward -394 -375 0.982764 0.238
slr0799 Forward -328 -309 -1.67217 0.293
sll0785 Forward -339 -320 2.3594 0.223
sll0669 Forward -388 -369 6.68596 0.177
slr0707 Forward -135 -116 11.7008 0.122
sll0509 Forward -22 -3 0.294447 0.249
sll0507 Reverse -25 -44 3.14605 0.218
sll0529 Reverse -247 -266 0.196116 0.249
sll0525 Forward -293 -274 0.196116 0.249
slr1451 Forward -216 -197 1.0811 0.238
slr1462 Reverse -310 -329 0.58944 0.246
slr1464 Forward -153 -134 -1.37718 0.283
slr1559 Reverse -298 -317 3.14605 0.218
slr1566 Forward -107 -88 1.67108 0.236
sll1484 Reverse -319 -338 -1.57384 0.29
sll0451 Forward -300 -281 8.06259 0.177
slr0453 Reverse -287 -306 0.0977854 0.249
slr0455 Forward -171 -152 6.39097 0.177
slr0456 Reverse -176 -195 -1.18052 0.278
slr1177 Forward -394 -375 1.0811 0.238
slr1182 Reverse -142 -161 7.47261 0.177
slr1183 Forward -340 -321 -1.37718 0.283
sll0577 Reverse -193 -212 2.45773 0.222
sll0572 Reverse -91 -110 1.37609 0.236
slr0592 Forward -217 -198 1.37609 0.236
sll5046 Forward -281 -262 12.9791 0.122
slr5051 Reverse -376 -395 0.786102 0.242
sll7001 Forward -352 -333 -0.688862 0.271
ssl7038 Reverse -352 -371 6.68596 0.177
ssl7039 Reverse -51 -70 6.68596 0.177
ssr7040 Forward -67 -48 6.68596 0.177
slr7041 Forward -309 -290 6.68596 0.177
slr7060 Forward -396 -377 14.2574 0.122
slr7097 Forward -195 -176 3.44104 0.218
slr7102 Reverse -353 -372 9.43923 0.177
sll8035 Reverse -65 -84 2.55606 0.221
slr8036 Forward -26 -7 2.55606 0.221
6803t01 Reverse -93 -112 0.786102 0.242
6803t31 Reverse -47 -66 0.0977854 0.249
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.059 0.941 0.000 0.000
0.176 0.588 0.059 0.176
0.412 0.412 0.000 0.176
0.000 0.000 0.000 1.000
0.000 0.059 0.941 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.059 0.529 0.000 0.412
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.059 0.353 0.294 0.294
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.059 0.294 0.118 0.529
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.059 0.412 0.176 0.353
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000