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Details for NP_441296.1_7

Name NP_441296.1_7
Length 20
Regular expression T[GA][CT][TG][GC][GC][CA][CT][CAT]TG[CG]G[TGACA]C[GA][AC]TGG
Central No

Motif logo

Genes containing this motif

73 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1393 Forward -355 -336 14.6508 0.267
sll0716 Forward -212 -193 13.4708 0.267
sml0003 Reverse -62 -81 13.6675 0.267
slr0245 Forward -87 -68 13.6675 0.267
slr0250 Reverse -150 -169 13.8641 0.267
slr1413 Forward -233 -214 17.3057 0.23
sll1678 Forward -117 -98 14.5524 0.267
sll1020 Reverse -132 -151 14.1591 0.267
sll1293 Forward -124 -105 12.5858 0.29
slr1392 Reverse -70 -89 17.404 0.23
slr1395 Forward -337 -318 12.4875 0.29
sll1911 Reverse -60 -79 16.1257 0.267
ssl2084 Forward -61 -42 13.9625 0.267
sll1359 Forward -338 -319 14.3558 0.267
slr0885 Forward -107 -88 14.2574 0.267
sll0860 Reverse -319 -338 14.4541 0.267
sll1699 Forward -293 -274 17.109 0.23
sll0849 Forward -212 -193 13.3725 0.267
slr1717 Forward -100 -81 14.4541 0.267
ssr2898 Forward -269 -250 13.6675 0.267
sll0242 Reverse -356 -375 12.5858 0.29
sll1987 Reverse -51 -70 14.3558 0.267
slr2087 Forward -153 -134 14.3558 0.267
slr1331 Reverse -4 -23 12.6841 0.29
sll0803 Forward -296 -277 12.5858 0.29
sll1899 Reverse -162 -181 12.5858 0.29
slr1962 Forward -202 -183 12.4875 0.29
slr1277 Reverse -115 -134 15.7324 0.267
sll1434 Forward -263 -244 13.4708 0.267
sll1102 Reverse -249 -268 12.5858 0.29
ssr2799 Forward -332 -313 15.6341 0.267
sll0912 Reverse -333 -352 13.2741 0.267
slr0958 Forward -366 -347 12.3892 0.29
slr1629 Forward -121 -102 15.3391 0.267
sll0273 Reverse -14 -33 13.5691 0.267
sll0261 Forward -367 -348 12.5858 0.29
slr0146 Forward -180 -161 15.1424 0.267
sll0328 Forward -252 -233 17.5024 0.23
sll0318 Forward -246 -227 12.9791 0.29
sll0007 Reverse -142 -161 12.3892 0.29
sll0204 Forward -286 -267 12.6841 0.29
sll0611 Reverse -129 -148 12.4875 0.29
slr0636 Forward -127 -108 12.4875 0.29
sll0188 Reverse -83 -102 13.0775 0.282
slr0191 Forward -114 -95 13.0775 0.282
slr0912 Forward -291 -272 15.2408 0.267
slr0073 Reverse -369 -388 12.4875 0.29
slr0090 Forward -225 -206 13.5691 0.267
sll0593 Reverse -132 -151 13.2741 0.267
slr0615 Forward -75 -56 13.2741 0.267
sll0793 Reverse -277 -296 13.3725 0.267
slr0798 Forward -285 -266 13.3725 0.267
sll0776 Forward -335 -316 13.8641 0.267
ssr1169 Reverse -343 -362 13.8641 0.267
sll0660 Reverse -380 -399 17.7974 0.23
sll0031 Forward -262 -243 12.3892 0.29
slr0038 Reverse -197 -216 12.3892 0.29
slr0661 Forward -323 -304 14.1591 0.267
sll0622 Forward -208 -189 19.5673 0.182
sll0622 Forward -121 -102 18.879 0.197
slr0746 Forward -58 -39 16.7157 0.257
slr1653 Forward -145 -126 16.5191 0.26
slr1657 Forward -370 -351 14.0608 0.267
sll1108 Reverse -121 -140 13.4708 0.267
slr1181 Forward -336 -317 13.4708 0.267
slr1182 Forward -400 -381 12.2908 0.29
slr0609 Reverse -195 -214 12.2908 0.29
sll5094 Reverse -15 -34 14.5524 0.267
ssr5121 Reverse -302 -321 13.3725 0.267
sll5122 Forward -342 -323 13.9625 0.267
slr5124 Reverse -224 -243 13.9625 0.267
sll7030 Reverse -143 -162 19.6656 0.182
ssl7039 Reverse -255 -274 13.9625 0.267
slr7041 Forward -105 -86 13.9625 0.267
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.053  0.947  
0.211 0.053 0.579 0.158
0.000 0.632 0.000 0.368
0.000 0.053 0.263 0.684
0.158 0.211 0.526 0.105
0.053 0.316 0.474 0.158
0.211 0.684 0.053 0.053
0.105 0.579 0.105 0.211
0.316 0.368 0.105 0.211
0.000 0.000 0.053 0.947
0.053 0.105 0.684 0.158
0.158 0.632 0.211 0.000
0.000 0.000 0.947 0.053
0.211 0.211 0.263 0.316
0.053 0.947 0.000 0.000
0.368 0.000 0.632 0.000
0.421 0.368 0.158 0.053
0.053 0.000 0.000 0.947
0.000 0.000 1.000 0.000
0.053 0.000 0.947 0.000