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Details for NP_441295.1_4

Name NP_441295.1_4
Length 20
Regular expression CC[TC]ATG[AG]C[CG][CAG][TC][AC]G[TC][GC][GC]G[GAC]T[TC]
Central No

Motif logo

Genes containing this motif

180 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1052 Reverse -375 -394 -4.91709 0.29
slr0723 Reverse -49 -68 -0.295539 0.29
slr0739 Reverse -244 -263 -3.44213 0.29
slr0743 Reverse -190 -209 -4.32711 0.29
sll0226 Forward -394 -375 -2.55715 0.29
sll0222 Reverse -105 -124 -3.24547 0.29
ssl2615 Forward -302 -283 -0.885524 0.29
sll1322 Reverse -214 -233 -2.16383 0.29
slr1417 Reverse -107 -126 1.0811 0.29
slr1094 Reverse -207 -226 -3.24547 0.29
sll1037 Forward -231 -212 3.53937 0.29
sll1029 Forward -70 -51 -0.787193 0.29
slr1109 Forward -353 -334 -3.24547 0.29
sll1679 Forward -356 -337 -2.45882 0.29
sll1670 Reverse -321 -340 -1.86883 0.29
ssr3000 Reverse -379 -398 -4.81876 0.29
sll1659 Forward -261 -242 -4.13045 0.29
slr1306 Reverse -130 -149 -5.01543 0.291
sll1187 Reverse -169 -188 -2.45882 0.29
sll1184 Reverse -217 -236 -4.52377 0.29
sll0923 Forward -240 -221 -2.45882 0.29
slr1610 Forward -50 -31 3.73603 0.29
slr0682 Forward -149 -130 -2.95047 0.29
slr0692 Reverse -218 -237 -2.36049 0.29
sll1509 Forward -81 -62 0.687771 0.29
slr1599 Reverse -285 -304 0.687771 0.29
slr1044 Forward -109 -90 -2.85214 0.29
ssr1736 Forward -267 -248 -1.67217 0.29
slr1760 Forward -352 -333 -0.39387 0.29
sll1640 Forward -227 -208 1.57275 0.29
slr1847 Reverse -172 -191 -4.13045 0.29
slr2041 Forward -320 -301 -3.63879 0.29
slr1022 Reverse -211 -230 2.0644 0.29
slr1024 Forward -313 -294 -2.85214 0.29
sll1285 Forward -42 -23 0.392778 0.29
sll1926 Forward -42 -23 -3.24547 0.29
slr2005 Reverse -50 -69 -3.24547 0.29
slr2006 Reverse -365 -384 -1.27885 0.29
slr2023 Forward -271 -252 -4.52377 0.29
slr2026 Forward -333 -314 -3.44213 0.29
sll1912 Forward -322 -303 1.76941 0.29
ssl3615 Forward -41 -22 1.76941 0.29
slr1146 Forward -181 -162 -4.91709 0.29
slr1147 Reverse -63 -82 -4.91709 0.29
sll1812 Reverse -137 -156 -2.55715 0.29
sll1797 Reverse -277 -296 -1.96717 0.29
slr1903 Reverse -276 -295 0.982764 0.29
slr2071 Forward -162 -143 -1.27885 0.29
slr2071 Reverse -146 -165 -1.47551 0.29
sll1745 Reverse -58 -77 4.916 0.29
slr1829 Reverse -239 -258 -1.96717 0.29
slr1538 Forward -90 -71 -3.04881 0.29
slr1546 Forward -379 -360 -3.3438 0.29
slr1547 Reverse -60 -79 -1.08219 0.29
slr1549 Forward -255 -236 7.47261 0.29
slr1549 Forward -284 -265 -4.91709 0.29
slr1222 Forward -290 -271 2.55606 0.29
sll1142 Forward -81 -62 -5.11376 0.293
sll1280 Forward -220 -201 -1.57384 0.29
slr1356 Reverse -174 -193 -1.57384 0.29
slr1366 Forward -343 -324 -2.16383 0.29
sll0876 Reverse -43 -62 -4.52377 0.29
slr0880 Forward -324 -305 -3.54046 0.29
sll1308 Forward -170 -151 7.07928 0.29
slr1406 Reverse -222 -241 7.07928 0.29
slr1857 Forward -84 -65 -1.47551 0.29
slr1886 Reverse -246 -265 -3.14714 0.29
slr1820 Reverse -372 -391 -4.13045 0.29
slr1746 Reverse -172 -191 -4.52377 0.29
sll1157 Reverse -276 -295 0.982764 0.29
slr1254 Forward -132 -113 -5.21209 0.295
slr1263 Forward -312 -293 4.52268 0.29
sll1958 Forward -260 -241 -2.85214 0.29
slr2004 Forward -316 -297 -1.27885 0.29
sll1615 Forward -134 -115 -2.0655 0.29
sll1613 Forward -176 -157 -0.197208 0.29
sll1592 Reverse -307 -326 -0.295539 0.29
ssr2912 Forward -172 -153 -4.42544 0.29
slr0264 Reverse -162 -181 -3.14714 0.29
slr0270 Forward -279 -260 0.687771 0.29
slr2096 Reverse -276 -295 0.982764 0.29
sll1229 Forward -128 -109 -3.83545 0.29
sll0817 Forward -372 -353 -3.04881 0.29
slr1336 Forward -20 -1 -1.7705 0.29
slr1339 Forward -228 -209 -5.21209 0.295
sll1251 Reverse -117 -136 6.29264 0.29
sll1894 Reverse -332 -351 -3.24547 0.29
sll1882 Forward -345 -326 -1.27885 0.29
slr1977 Reverse -143 -162 7.66927 0.29
sll1386 Reverse -190 -209 -2.65548 0.29
sll1381 Forward -104 -85 -0.4922 0.29
sll1173 Forward -372 -353 -0.0988766 0.29
sll1439 Forward -332 -313 -1.47551 0.29
slr1531 Reverse -128 -147 -1.47551 0.29
sll1103 Reverse -28 -47 -2.65548 0.29
sll0912 Reverse -337 -356 -0.688862 0.29
sll0909 Forward -368 -349 -4.13045 0.29
sll1533 Reverse -212 -231 -3.63879 0.29
slr1634 Forward -385 -366 -3.63879 0.29
slr1646 Forward -88 -69 -4.32711 0.29
ssr2754 Reverse -202 -221 -4.81876 0.29
sll0421 Reverse -152 -171 -1.18052 0.29
sll0273 Forward -314 -295 -4.6221 0.29
sll0271 Reverse -40 -59 -5.31042 0.297
slr0280 Forward -162 -143 -4.32711 0.29
sll0264 Reverse -51 -70 -5.01543 0.291
sll0261 Forward -199 -180 -2.45882 0.29
slr0284 Reverse -100 -119 -2.45882 0.29
slr0400 Forward -390 -371 -1.47551 0.29
slr0146 Forward -98 -79 -1.18052 0.29
slr0147 Forward -400 -381 -1.18052 0.29
sll0145 Reverse -273 -292 -1.96717 0.29
slr0325 Reverse -337 -356 6.4893 0.29
sll0174 Forward -394 -375 -1.47551 0.29
slr0369 Reverse -78 -97 6.68596 0.29
sll0336 Reverse -75 -94 7.17762 0.29
sll0335 Reverse -103 -122 -3.24547 0.29
slr0373 Forward -177 -158 -3.24547 0.29
slr0388 Reverse -71 -90 -3.04881 0.29
sll0766 Forward -38 -19 4.12936 0.29
sll0764 Reverse -275 -294 -2.85214 0.29
slr0784 Reverse -236 -255 1.76941 0.29
slr0343 Forward -205 -186 -3.63879 0.29
sll0319 Forward -198 -179 -1.37718 0.29
slr0348 Reverse -79 -98 -1.37718 0.29
slr0001 Forward -227 -208 14.0608 0.243
sll0021 Forward -262 -243 -5.31042 0.297
sll0008 Forward -394 -375 -3.63879 0.29
sll0198 Reverse -313 -332 -0.197208 0.29
sll0410 Reverse -143 -162 -4.32711 0.29
slr0056 Forward -343 -324 -1.96717 0.29
slr0476 Reverse -246 -265 -2.55715 0.29
slr0476 Forward -318 -299 -4.91709 0.29
slr0492 Forward -358 -339 -1.96717 0.29
sll0603 Reverse -198 -217 -1.08219 0.29
sll0396 Reverse -36 -55 1.76941 0.29
slr0417 Forward -327 -308 -3.63879 0.29
sll0383 Forward -393 -374 -2.75381 0.29
slr0192 Reverse -175 -194 -4.22878 0.29
sll0183 Reverse -71 -90 -1.86883 0.29
ssr1399 Forward -177 -158 -2.55715 0.29
sll0822 Forward -271 -252 -0.885524 0.29
slr0081 Reverse -267 -286 1.17943 0.29
slr0505 Forward -269 -250 -3.14714 0.29
slr0516 Reverse -360 -379 -0.0988766 0.29
slr0615 Forward -211 -192 -0.590531 0.29
slr0615 Forward -220 -201 -1.7705 0.29
sll0586 Reverse -108 -127 -1.96717 0.29
slr0623 Forward -256 -237 -1.96717 0.29
sll0095 Reverse -232 -251 -2.0655 0.29
sll0283 Forward -280 -261 -3.83545 0.29
slr0309 Reverse -210 -229 -3.83545 0.29
slr0796 Reverse -34 -53 -4.03212 0.29
sll0794 Reverse -337 -356 -4.81876 0.29
sll0676 Reverse -217 -236 -3.83545 0.29
ssr1175 Forward -245 -226 -3.83545 0.29
sll0034 Forward -244 -225 -3.63879 0.29
sll0498 Forward -85 -66 -4.22878 0.29
sll0900 Forward -34 -15 -0.0988766 0.29
slr1424 Forward -370 -351 -4.6221 0.29
sll1336 Reverse -183 -202 -4.03212 0.29
sll1365 Reverse -53 -72 0.491109 0.29
slr1462 Forward -176 -157 0.491109 0.29
sll1470 Forward -344 -325 3.34271 0.29
slr0755 Forward -212 -193 -4.72043 0.29
sll1550 Reverse -71 -90 -0.885524 0.29
slr1656 Reverse -177 -196 -1.27885 0.29
slr0455 Forward -183 -164 -4.42544 0.29
slr0457 Reverse -53 -72 6.4893 0.29
sll1110 Reverse -276 -295 -2.0655 0.29
slr1182 Reverse -69 -88 -1.96717 0.29
slr0597 Reverse -57 -76 0.0977854 0.29
slr0602 Forward -282 -263 -0.39387 0.29
sll5107 Reverse -360 -379 4.42435 0.29
ssl7022 Reverse -294 -313 -4.03212 0.29
slr7102 Forward -99 -80 -1.67217 0.29
sll8034 Forward -166 -147 4.22769 0.29
slr6001 Forward -32 -13 3.6377 0.29
slr6034 Reverse -306 -325 3.14605 0.29
6803t02 Reverse -40 -59 -1.86883 0.29
6803t02 Forward -135 -116 -2.85214 0.29
6803t18 Reverse -166 -185 -1.7705 0.29
6803t19 Reverse -173 -192 -4.6221 0.29
6803t24 Reverse -229 -248 8.65258 0.29
6803t42 Reverse -202 -221 0.687771 0.29
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 1.000 0.000 0.000
0.000 0.250 0.000 0.750
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.750 0.000 0.250 0.000
0.000 1.000 0.000 0.000
0.000 0.750 0.250 0.000
0.250 0.500 0.250 0.000
0.000 0.250 0.000 0.750
0.750 0.250 0.000 0.000
0.000 0.000 1.000 0.000
0.000 0.250 0.000 0.750
0.000 0.250 0.750 0.000
0.000 0.250 0.750 0.000
0.000 0.000 1.000 0.000
0.250 0.250 0.500 0.000
0.000 0.000 0.000 1.000
0.000 0.250 0.000 0.750