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Details for NP_441250.1_3

Name NP_441250.1_3
Length 20
Regular expression G[CT]CAAA[GT][AT][TA][GT]T[CG]G[TC]AA[TA]T[AG][TA]
Central Yes

Motif logo

Genes containing this motif

304 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1205 Reverse -70 -89 5.70265 0.24
slr1485 Reverse -41 -60 6.98095 0.212
sll1394 Forward -57 -38 4.71934 0.244
sll1393 Forward -343 -324 9.3409 0.197
slr1114 Reverse -175 -194 3.53937 0.263
slr0730 Forward -209 -190 1.76941 0.284
sll0230 Forward -389 -370 2.55606 0.272
sll0226 Forward -293 -274 3.93269 0.252
sll0224 Reverse -41 -60 11.6025 0.188
sll1321 Forward -400 -381 11.2092 0.188
sll1319 Reverse -214 -233 5.11266 0.241
sll1041 Reverse -235 -254 2.85105 0.267
slr1094 Forward -37 -18 4.916 0.241
slr1101 Forward -51 -32 2.65439 0.27
sll1036 Reverse -226 -245 2.0644 0.28
sll1031 Forward -373 -354 6.88262 0.213
slr1784 Reverse -119 -138 6.98095 0.212
sll1670 Reverse -287 -306 6.68596 0.22
sll1666 Forward -30 -11 3.93269 0.252
slr1796 Reverse -27 -46 3.93269 0.252
sll1201 Forward -69 -50 4.916 0.241
slr1291 Reverse -157 -176 4.916 0.241
slr1298 Forward -232 -213 2.85105 0.267
sll1189 Reverse -249 -268 4.22769 0.252
sll1187 Reverse -195 -214 2.45773 0.274
ssl1792 Reverse -46 -65 6.19431 0.232
sll0936 Forward -289 -270 3.04771 0.266
slr0984 Reverse -349 -368 1.57275 0.287
slr1067 Forward -44 -25 1.67108 0.285
slr1068 Reverse -290 -309 1.17943 0.297
slr1082 Forward -89 -70 19.0757 0.0838
slr1085 Forward -138 -119 14.5524 0.131
sll1021 Forward -66 -47 4.42435 0.252
ssl2920 Reverse -237 -256 4.42435 0.252
sll1505 Forward -264 -245 5.01433 0.241
sll1005 Reverse -98 -117 2.65439 0.27
sll1752 Reverse -321 -340 6.09597 0.232
slr1846 Forward -387 -368 6.09597 0.232
sll1751 Reverse -297 -316 5.89931 0.24
ssr3451 Forward -37 -18 9.43923 0.197
smr0006 Forward -319 -300 9.43923 0.197
sll1938 Forward -93 -74 3.04771 0.266
slr2046 Forward -127 -108 1.37609 0.291
slr1907 Reverse -237 -256 5.01433 0.241
slr1908 Forward -396 -377 1.47442 0.288
sll1834 Forward -317 -298 5.211 0.241
slr1915 Reverse -183 -202 5.211 0.241
slr1917 Forward -237 -218 6.58763 0.223
slr1039 Forward -323 -304 4.22769 0.252
slr1385 Reverse -148 -167 9.14423 0.197
ssr2333 Reverse -15 -34 4.03102 0.252
slr1392 Reverse -262 -281 4.03102 0.252
sll1571 Forward -217 -198 5.89931 0.24
sll1571 Reverse -72 -91 5.60432 0.24
sll1571 Reverse -84 -103 3.24438 0.266
sll1927 Reverse -258 -277 4.71934 0.244
slr2005 Forward -349 -330 4.71934 0.244
slr2027 Reverse -132 -151 3.44104 0.263
sll1911 Forward -260 -241 5.80098 0.24
sll1082 Reverse -123 -142 1.0811 0.298
sll1825 Forward -344 -325 0.982764 0.299
sll1810 Reverse -309 -328 2.3594 0.28
ssl3437 Forward -190 -171 4.03102 0.252
sll1796 Reverse -81 -100 5.30933 0.241
slr1897 Forward -100 -81 5.30933 0.241
slr1902 Reverse -171 -190 13.1758 0.176
ssr2009 Forward -178 -159 1.67108 0.285
sll1971 Reverse -137 -156 12.4875 0.183
slr2070 Forward -46 -27 12.4875 0.183
slr2071 Reverse -269 -288 2.85105 0.267
sll1742 Reverse -313 -332 6.29264 0.232
slr1536 Reverse -45 -64 14.5524 0.131
slr1538 Forward -78 -59 6.29264 0.232
slr1538 Reverse -121 -140 1.37609 0.291
slr1543 Forward -234 -215 8.45592 0.199
sll1461 Forward -319 -300 5.50599 0.24
sll1457 Reverse -11 -30 7.7676 0.199
sll1454 Reverse -347 -366 8.25926 0.199
slr1752 Reverse -229 -248 3.93269 0.252
sll1142 Forward -189 -170 2.85105 0.267
sll1135 Reverse -5 -24 5.30933 0.241
slr1232 Forward -149 -130 5.30933 0.241
slr1237 Forward -220 -201 8.94757 0.197
slr1364 Forward -358 -339 3.44104 0.263
slr1368 Reverse -178 -197 4.916 0.241
sll1265 Forward -361 -342 2.16274 0.28
sll0871 Reverse -88 -107 4.42435 0.252
sll0871 Reverse -324 -343 3.04771 0.266
sll0871 Reverse -194 -213 2.45773 0.274
slr0884 Forward -228 -209 4.42435 0.252
slr0884 Forward -122 -103 2.45773 0.274
sll1307 Forward -157 -138 4.03102 0.252
sll1783 Reverse -333 -352 1.0811 0.298
slr1852 Forward -151 -132 1.0811 0.298
slr1871 Forward -276 -257 12.4875 0.183
ssr3184 Forward -316 -297 5.60432 0.24
sll1755 Reverse -332 -351 11.2092 0.188
slr2132 Reverse -226 -245 1.86774 0.283
sll1709 Forward -129 -110 3.24438 0.266
sll1704 Reverse -122 -141 6.39097 0.228
sll1702 Reverse -339 -358 2.55606 0.272
sll1698 Forward -315 -296 4.32602 0.252
slr1813 Reverse -212 -231 15.5357 0.111
sll1689 Reverse -214 -233 1.86774 0.283
sll1628 Forward -311 -292 6.88262 0.213
slr1742 Reverse -315 -334 12.0942 0.188
sll0856 Reverse -117 -136 1.17943 0.297
sll0849 Forward -295 -276 5.211 0.241
slr0861 Reverse -257 -276 11.6025 0.188
slr0864 Reverse -162 -181 2.0644 0.28
sll0839 Forward -68 -49 14.4541 0.131
slr0871 Forward -32 -13 2.75272 0.267
sll1164 Reverse -334 -353 1.86774 0.283
slr1248 Reverse -377 -396 2.55606 0.272
sll1957 Reverse -225 -244 1.76941 0.284
slr2057 Forward -147 -128 1.76941 0.284
slr2060 Forward -200 -181 5.99764 0.24
slr1993 Forward -39 -20 5.01433 0.241
slr2000 Reverse -34 -53 1.76941 0.284
sll1612 Forward -187 -168 4.03102 0.252
slr1717 Forward -71 -52 7.17762 0.212
ssr2898 Forward -160 -141 3.44104 0.263
ssr2912 Forward -310 -291 25.8605 0.00676
slr0260 Reverse -172 -191 3.14605 0.266
slr0265 Reverse -104 -123 4.71934 0.244
sll0250 Reverse -381 -400 7.66927 0.199
ssl0461 Reverse -117 -136 7.66927 0.199
sll0237 Reverse -210 -229 2.85105 0.267
sll1988 Reverse -115 -134 14.0608 0.134
slr2087 Reverse -185 -204 3.44104 0.263
ssl2781 Forward -162 -143 3.24438 0.266
slr1519 Forward -271 -252 3.24438 0.266
slr1521 Forward -364 -345 7.66927 0.199
slr1522 Reverse -361 -380 5.30933 0.241
slr2118 Reverse -64 -83 6.98095 0.212
sll1228 Forward -176 -157 3.93269 0.252
slr1329 Reverse -57 -76 3.93269 0.252
sll1225 Reverse -179 -198 11.0125 0.188
sll1220 Forward -214 -195 5.211 0.241
sll0813 Forward -379 -360 1.47442 0.288
sll0810 Forward -157 -138 1.27776 0.294
slr1343 Forward -312 -293 3.6377 0.263
slr1962 Reverse -130 -149 5.89931 0.24
ssr3341 Forward -109 -90 4.03102 0.252
slr1979 Reverse -132 -151 4.03102 0.252
sll1876 Reverse -345 -364 2.0644 0.28
sll1875 Forward -43 -24 3.44104 0.263
sll1872 Forward -127 -108 5.80098 0.24
ssl2717 Reverse -301 -320 6.39097 0.228
sll1389 Reverse -302 -321 3.83436 0.254
sll1381 Reverse -229 -248 4.42435 0.252
slr1266 Reverse -184 -203 9.73422 0.197
slr1281 Forward -250 -231 3.34271 0.266
sll1102 Reverse -20 -39 3.34271 0.266
slr1161 Forward -329 -310 2.75272 0.267
slr1163 Reverse -156 -175 4.03102 0.252
slr1166 Reverse -361 -380 5.211 0.241
slr1168 Forward -57 -38 2.0644 0.28
sll1086 Reverse -139 -158 3.04771 0.266
slr1173 Forward -83 -64 3.04771 0.266
ssr1951 Reverse -88 -107 1.96607 0.281
slr1174 Reverse -329 -348 1.96607 0.281
sll1559 Reverse -49 -68 2.75272 0.267
slr1686 Forward -242 -223 2.75272 0.267
slr1689 Forward -44 -25 4.62101 0.249
sll1540 Forward -22 -3 6.98095 0.212
slr1622 Reverse -17 -36 6.98095 0.212
slr1627 Forward -94 -75 2.0644 0.28
sll1528 Reverse -133 -152 11.8975 0.188
slr1647 Forward -141 -122 6.09597 0.232
sll0426 Forward -126 -107 3.34271 0.266
slr0444 Reverse -62 -81 3.34271 0.266
slr0447 Reverse -238 -257 2.26107 0.28
sll0263 Forward -277 -258 11.2092 0.188
slr0404 Reverse -348 -367 2.75272 0.267
sll0356 Reverse -96 -115 1.47442 0.288
slr0144 Forward -131 -112 2.0644 0.28
slr0144 Forward -343 -324 1.67108 0.285
ssl0259 Reverse -19 -38 3.73603 0.261
sll0142 Forward -379 -360 2.65439 0.27
slr1935 Reverse -199 -218 1.57275 0.287
sll1853 Forward -393 -374 3.6377 0.263
slr1944 Reverse -311 -330 1.37609 0.291
slr0992 Reverse -329 -348 7.66927 0.199
slr0992 Forward -47 -28 3.73603 0.261
slr0325 Reverse -259 -278 3.93269 0.252
slr0333 Reverse -17 -36 8.06259 0.199
sll0170 Forward -298 -279 5.01433 0.241
sll0168 Reverse -186 -205 2.16274 0.28
sll0168 Reverse -254 -273 1.96607 0.281
sll0167 Forward -252 -233 4.03102 0.252
sll0157 Forward -194 -175 14.7491 0.131
slr0361 Reverse -230 -249 21.7306 0.0565
slr0362 Reverse -132 -151 3.04771 0.266
slr0776 Reverse -323 -342 13.5691 0.157
slr0776 Reverse -311 -330 5.70265 0.24
sll0765 Forward -317 -298 3.44104 0.263
slr0354 Forward -304 -285 6.58763 0.223
sll0020 Forward -285 -266 4.42435 0.252
sll0006 Reverse -310 -329 17.404 0.0862
sll0205 Forward -150 -131 2.45773 0.274
sll0194 Reverse -179 -198 1.76941 0.284
slr0229 Forward -214 -195 1.76941 0.284
sll0405 Reverse -361 -380 5.211 0.241
sll0068 Forward -65 -46 4.81767 0.244
slr0069 Forward -195 -176 7.07928 0.212
sll0461 Forward -155 -136 2.75272 0.267
slr0473 Reverse -300 -319 2.75272 0.267
slr0473 Forward -67 -48 2.65439 0.27
sll0682 Forward -269 -250 2.45773 0.274
sll0617 Forward -379 -360 1.0811 0.298
slr0630 Reverse -170 -189 1.0811 0.298
sll0611 Reverse -186 -205 8.84924 0.197
slr0636 Forward -70 -51 8.84924 0.197
slr0638 Forward -63 -44 4.916 0.241
slr0417 Forward -315 -296 1.47442 0.288
slr0191 Reverse -212 -231 3.14605 0.266
ssr1513 Reverse -205 -224 4.03102 0.252
slr0905 Forward -122 -103 3.44104 0.263
slr0912 Reverse -140 -159 1.17943 0.297
slr0913 Forward -378 -359 0.982764 0.299
slr0922 Forward -371 -352 12.4875 0.183
sll0554 Reverse -36 -55 4.03102 0.252
slr1002 Reverse -114 -133 7.07928 0.212
slr0572 Forward -31 -12 7.07928 0.212
ssr1398 Forward -286 -267 3.93269 0.252
sll0833 Reverse -226 -245 3.04771 0.266
slr0846 Forward -164 -145 2.0644 0.28
slr0088 Forward -271 -252 5.50599 0.24
sll0487 Reverse -287 -306 5.60432 0.24
sll0485 Reverse -138 -157 8.35759 0.199
slr0505 Forward -396 -377 2.45773 0.274
sll0477 Forward -52 -33 5.11266 0.241
slr0513 Reverse -160 -179 5.11266 0.241
slr0522 Forward -389 -370 12.2908 0.185
sll0594 Forward -228 -209 9.14423 0.197
slr0625 Forward -222 -203 5.70265 0.24
sll0096 Reverse -111 -130 3.44104 0.263
slr0793 Forward -251 -232 1.76941 0.284
sll0778 Reverse -282 -301 2.75272 0.267
slr0709 Forward -396 -377 4.71934 0.244
slr0710 Reverse -225 -244 4.03102 0.252
sll0745 Reverse -281 -300 1.67108 0.285
slr0528 Reverse -16 -35 3.04771 0.266
slr0531 Reverse -96 -115 17.109 0.0862
sll0509 Reverse -101 -120 5.50599 0.24
sll0499 Reverse -82 -101 4.62101 0.249
slr0544 Forward -346 -327 4.62101 0.249
sll0497 Forward -135 -116 2.94938 0.267
slr0545 Reverse -42 -61 2.94938 0.267
sll0494 Forward -270 -251 2.75272 0.267
ssr1558 Reverse -314 -333 6.4893 0.226
ssr1558 Forward -339 -320 2.26107 0.28
slr0551 Forward -312 -293 2.3594 0.28
sll0529 Forward -49 -30 1.37609 0.291
sll0525 Forward -318 -299 3.34271 0.266
ssl1004 Forward -28 -9 3.34271 0.266
sll1343 Forward -89 -70 4.22769 0.252
sll1340 Reverse -335 -354 0.982764 0.299
slr1563 Reverse -199 -218 1.57275 0.287
slr1564 Reverse -285 -304 2.0644 0.28
sll1482 Forward -98 -79 8.65258 0.199
sll1474 Forward -238 -219 1.0811 0.298
sll1470 Forward -282 -263 10.5209 0.197
sll0735 Reverse -317 -336 2.0644 0.28
sll0728 Forward -294 -275 14.1591 0.134
slr1653 Forward -207 -188 2.85105 0.267
sll1549 Forward -297 -278 4.22769 0.252
slr1655 Reverse -208 -227 4.22769 0.252
slr1658 Forward -50 -31 9.63589 0.197
sll0450 Forward -44 -25 5.01433 0.241
sll0442 Reverse -359 -378 1.67108 0.285
slr0459 Reverse -42 -61 11.3075 0.188
slr1177 Reverse -288 -307 3.73603 0.261
sll1106 Forward -95 -76 3.44104 0.263
slr1192 Reverse -105 -124 3.44104 0.263
slr0590 Reverse -81 -100 4.42435 0.252
sll0573 Reverse -226 -245 3.53937 0.263
sll0572 Reverse -202 -221 5.50599 0.24
slr0592 Forward -106 -87 5.50599 0.24
slr0601 Reverse -177 -196 3.04771 0.266
slr0607 Reverse -164 -183 3.04771 0.266
slr0609 Reverse -264 -283 4.03102 0.252
ssl5007 Forward -118 -99 4.81767 0.244
ssl5007 Reverse -93 -112 3.04771 0.266
sll5014 Reverse -73 -92 3.83436 0.254
slr5016 Forward -291 -272 3.83436 0.254
sll5032 Reverse -11 -30 6.09597 0.232
sll5032 Reverse -155 -174 4.12936 0.252
sll5050 Forward -116 -97 3.04771 0.266
sll5060 Reverse -261 -280 2.26107 0.28
sll5081 Reverse -142 -161 4.22769 0.252
slr5082 Forward -348 -329 4.22769 0.252
slr5093 Reverse -118 -137 7.7676 0.199
slr5102 Forward -178 -159 2.85105 0.267
sll7006 Forward -329 -310 7.96426 0.199
ssl7007 Forward -102 -83 7.96426 0.199
ssl7039 Forward -287 -268 2.0644 0.28
slr7041 Reverse -73 -92 2.0644 0.28
sll7067 Reverse -281 -300 5.11266 0.241
slr7068 Forward -46 -27 5.11266 0.241
slr7073 Forward -294 -275 1.96607 0.281
slr6006 Reverse -174 -193 1.47442 0.288
slr6013 Forward -227 -208 16.3224 0.0862
sll6017 Forward -362 -343 9.93088 0.197
ssr6019 Reverse -147 -166 9.93088 0.197
ssr6032 Forward -175 -156 2.0644 0.28
slr6033 Forward -194 -175 2.0644 0.28
slr6041 Forward -397 -378 3.53937 0.263
slr6065 Reverse -174 -193 1.47442 0.288
slr6072 Forward -227 -208 16.3224 0.0862
sll6076 Forward -362 -343 9.93088 0.197
ssr6078 Reverse -147 -166 9.93088 0.197
slr6091 Forward -194 -175 2.0644 0.28
slr6105 Reverse -312 -331 3.04771 0.266
6803t01 Reverse -43 -62 4.916 0.241
6803t02 Reverse -6 -25 6.68596 0.22
6803t26 Reverse -312 -331 3.6377 0.263
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.667 0.000 0.333
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
0.833 0.000 0.000 0.167
0.000 0.000 0.667 0.333
0.500 0.000 0.000 0.500
0.333 0.000 0.000 0.667
0.000 0.000 0.500 0.500
0.000 0.167 0.000 0.833
0.000 0.500 0.333 0.167
0.000 0.167 0.667 0.167
0.000 0.333 0.000 0.667
0.667 0.167 0.167 0.000
1.000 0.000 0.000 0.000
0.333 0.167 0.000 0.500
0.000 0.000 0.000 1.000
0.667 0.000 0.333 0.000
0.333 0.000 0.000 0.667