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Details for NP_441206.1_4

Name NP_441206.1_4
Length 20
Regular expression C[TCG]GT[GC][AG]TCAA[TC]GCCCG[CT]TTC
Central No

Motif logo

Genes containing this motif

62 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1064 Reverse -71 -90 -9.93197 0.297
sll1043 Forward -116 -97 4.62101 0.0863
sll0222 Forward -205 -186 -5.31042 0.263
slr0254 Reverse -316 -335 -5.31042 0.263
slr1413 Forward -290 -271 -4.6221 0.263
sll1652 Reverse -46 -65 -5.31042 0.263
slr1289 Forward -314 -295 -5.31042 0.263
sll0933 Reverse -248 -267 -6.98204 0.266
sll1006 Reverse -371 -390 4.22769 0.0863
ssr1698 Reverse -354 -373 -1.96717 0.193
slr1379 Reverse -297 -316 -4.52377 0.263
slr2025 Reverse -264 -283 -6.09707 0.263
slr1196 Reverse -309 -328 5.211 0.0808
sll1450 Reverse -182 -201 1.17943 0.11
slr1410 Forward -121 -102 5.40766 0.0808
slr1874 Reverse -122 -141 -2.55715 0.22
slr1882 Reverse -265 -284 -5.80207 0.263
ssr3188 Forward -356 -337 -5.9004 0.263
slr0854 Reverse -359 -378 -2.45882 0.218
sll0848 Reverse -188 -207 -1.96717 0.193
slr2060 Reverse -197 -216 -6.78538 0.266
ssr3383 Reverse -238 -257 -6.49039 0.266
slr1991 Forward -65 -46 -6.98204 0.266
slr1723 Forward -203 -184 -4.72043 0.263
sll1600 Reverse -308 -327 -3.93378 0.263
slr2079 Reverse -26 -45 -5.99873 0.263
slr2105 Forward -353 -334 -4.22878 0.263
sll1250 Reverse -199 -218 15.5357 0.0296
sll1890 Forward -379 -360 -4.52377 0.263
ssl3549 Reverse -152 -171 -2.36049 0.218
slr1972 Forward -31 -12 -2.36049 0.218
sll1378 Forward -145 -126 -5.80207 0.263
sll1173 Forward -281 -262 -5.80207 0.263
ssl2148 Reverse -312 -331 -6.58872 0.266
sll1535 Forward -127 -108 -1.96717 0.193
sll1521 Forward -270 -251 -5.99873 0.263
sll0148 Forward -301 -282 -9.83364 0.295
slr0172 Forward -301 -282 -4.6221 0.263
sll0168 Reverse -195 -214 -4.32711 0.263
sml0001 Reverse -252 -271 -4.52377 0.263
slr0482 Reverse -165 -184 5.80098 0.0808
sll0683 Forward -69 -50 5.50599 0.0808
sll0382 Reverse -145 -164 6.58763 0.079
slr0196 Forward -142 -123 -3.83545 0.263
slr0827 Reverse -322 -341 -5.31042 0.263
sll0484 Forward -273 -254 -4.42544 0.263
sll0470 Forward -113 -94 -0.0988766 0.115
slr0302 Reverse -332 -351 -9.83364 0.295
slr0786 Reverse -326 -345 -6.49039 0.266
slr0797 Forward -335 -316 -9.63698 0.295
sll0666 Reverse -35 -54 -7.08038 0.266
sll0743 Reverse -97 -116 -9.83364 0.295
sll1336 Reverse -190 -209 -8.45701 0.275
sll0630 Reverse -51 -70 -3.93378 0.263
ssl7038 Forward -364 -345 8.84924 0.0296
ssl7039 Forward -63 -44 8.84924 0.0296
ssr7040 Reverse -55 -74 8.84924 0.0296
slr7041 Reverse -297 -316 8.84924 0.0296
slr7095 Reverse -258 -277 -4.42544 0.263
slr6006 Reverse -184 -203 -4.42544 0.263
slr6065 Reverse -184 -203 -4.42544 0.263
6803t35 Forward -126 -107 -5.99873 0.263
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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