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Details for NP_441126.1_8

Name NP_441126.1_8
Length 14
Regular expression G[GC]AG[GT][CG]GCT[GA]G[CGT]GG
Central Yes

Motif logo

Genes containing this motif

67 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0743 Reverse -307 -320 7.6891 0.291
ssr0390 Forward -247 -234 6.31247 0.291
sll0932 Forward -335 -322 12.704 0.291
ssr1789 Forward -117 -104 6.01747 0.291
slr0688 Reverse -237 -250 6.1158 0.291
slr1604 Reverse -302 -315 6.1158 0.291
sll1752 Reverse -362 -375 6.01747 0.291
slr1846 Forward -346 -333 6.01747 0.291
sll0981 Reverse -230 -243 8.37742 0.291
sll1284 Reverse -28 -41 6.4108 0.291
slr2012 Forward -396 -383 6.01747 0.291
slr1134 Forward -314 -301 17.1289 0.159
slr1146 Reverse -387 -400 6.60746 0.291
slr1842 Reverse -112 -125 6.21414 0.291
slr0880 Forward -391 -378 6.70579 0.291
slr1874 Forward -283 -270 12.3107 0.291
slr1876 Forward -137 -124 6.70579 0.291
sll1765 Forward -299 -286 6.31247 0.291
sll1692 Forward -62 -49 5.91914 0.296
slr1735 Forward -331 -318 14.8673 0.291
sll0858 Forward -177 -164 11.1307 0.291
slr1998 Reverse -290 -303 6.70579 0.291
slr2003 Forward -341 -328 7.29578 0.291
slr2103 Forward -131 -118 7.49244 0.291
slr2105 Forward -313 -300 6.50913 0.291
slr1511 Forward -369 -356 13.884 0.291
sll1232 Forward -351 -338 9.16406 0.291
sll1888 Forward -183 -170 9.16406 0.291
slr1972 Reverse -317 -330 9.16406 0.291
sll1388 Reverse -376 -389 6.4108 0.291
smr0010 Forward -64 -51 6.4108 0.291
slr1288 Reverse -226 -239 25.2903 0.0188
slr1622 Forward -73 -60 12.114 0.291
sll0356 Forward -221 -208 9.16406 0.291
slr0151 Forward -221 -208 7.6891 0.291
sll0177 Forward -66 -53 6.1158 0.291
sll0172 Reverse -176 -189 12.704 0.291
sll0168 Forward -110 -97 6.1158 0.291
slr0224 Reverse -336 -349 6.31247 0.291
sll0614 Reverse -85 -98 6.31247 0.291
slr0637 Forward -248 -235 14.4739 0.291
sll0397 Forward -71 -58 6.60746 0.291
sll0395 Reverse -258 -271 7.59077 0.291
slr0900 Reverse -319 -332 7.19745 0.291
sll0833 Reverse -307 -320 12.6056 0.291
sll0779 Reverse -228 -241 8.86907 0.291
slr0711 Reverse -365 -378 6.31247 0.291
slr0925 Reverse -296 -309 13.1956 0.291
slr0656 Forward -75 -62 12.6056 0.291
slr1566 Reverse -324 -337 6.60746 0.291
slr1573 Forward -346 -333 6.01747 0.291
sll1479 Forward -387 -374 14.7689 0.291
sll1476 Forward -322 -309 6.01747 0.291
slr1653 Forward -298 -285 6.21414 0.291
sll0445 Reverse -72 -85 10.7374 0.291
sll1109 Reverse -317 -330 13.589 0.291
slr0593 Reverse -160 -173 13.9823 0.291
ssl5070 Reverse -238 -251 10.7374 0.291
sll5097 Forward -101 -88 6.50913 0.291
ssl5103 Forward -238 -225 6.01747 0.291
ssl7039 Reverse -108 -121 12.409 0.291
slr7041 Forward -252 -239 12.409 0.291
slr6038 Forward -238 -225 6.01747 0.291
slr6057 Forward -66 -53 7.59077 0.291
slr6097 Forward -119 -106 6.1158 0.291
6803t05 Reverse -275 -288 5.91914 0.296
6803t19 Reverse -67 -80 6.4108 0.291
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.250 0.750 0.000
1.000 0.000 0.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.750 0.250
0.000 0.750 0.250 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 0.000 1.000
0.250 0.000 0.750 0.000
0.000 0.000 1.000 0.000
0.000 0.500 0.250 0.250
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000