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Details for NP_441106.1_3

Name NP_441106.1_3
Length 20
Regular expression [AT][AT][TA][TC]GTTA[CA][AG]AT[TA]C[TA]T[AT]A[CTA]A
Central Yes

Motif logo

Genes containing this motif

103 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1214 Reverse -141 -160 10.7175 0.245
sll1396 Reverse -73 -92 15.1424 0.148
slr1498 Forward -333 -314 15.1424 0.148
sll0698 Reverse -105 -124 14.4541 0.158
slr0737 Forward -91 -72 14.4541 0.158
slr1788 Forward -242 -223 10.1275 0.288
sll1671 Reverse -144 -163 15.5357 0.135
slr1790 Forward -198 -179 15.5357 0.135
sll0934 Reverse -151 -170 16.8141 0.103
slr0981 Forward -39 -20 11.0125 0.236
slr1617 Reverse -107 -126 10.2259 0.285
slr1593 Forward -120 -101 25.4672 0.000189
slr1851 Forward -145 -126 13.9625 0.16
slr2051 Reverse -82 -101 13.1758 0.192
ssl1911 Reverse -71 -90 9.93088 0.29
slr1019 Forward -49 -30 9.93088 0.29
ssl2542 Forward -47 -28 22.9106 0.00548
ssl2542 Forward -67 -48 11.5042 0.217
sll1911 Reverse -20 -39 11.7992 0.217
sll1068 Forward -372 -353 10.7175 0.245
ssl3451 Forward -90 -71 10.7175 0.245
slr1890 Reverse -41 -60 10.7175 0.245
sll1802 Reverse -293 -312 12.2908 0.217
sll1797 Forward -224 -205 13.0775 0.195
sll1796 Forward -355 -336 11.3075 0.217
sll1791 Reverse -60 -79 11.3075 0.217
ssr2016 Forward -111 -92 20.2556 0.038
sll1712 Reverse -122 -141 17.699 0.078
sll1468 Reverse -269 -288 19.174 0.0559
sll1468 Forward -271 -252 16.7157 0.103
sll1468 Reverse -259 -278 11.6025 0.217
ssr2595 Forward -70 -51 19.174 0.0559
ssr2595 Reverse -68 -87 16.7157 0.103
ssr2595 Forward -80 -61 11.6025 0.217
slr1544 Forward -331 -312 19.174 0.0559
slr1544 Reverse -329 -348 16.7157 0.103
slr1544 Forward -341 -322 11.6025 0.217
ssr2062 Reverse -24 -43 12.2908 0.217
sll0873 Forward -343 -324 9.83255 0.296
slr0881 Reverse -98 -117 9.83255 0.296
sll1785 Reverse -211 -230 12.1925 0.217
sll1758 Reverse -112 -131 12.3892 0.217
ssr3184 Forward -56 -37 12.3892 0.217
slr1881 Forward -390 -371 12.3892 0.217
sll2013 Reverse -51 -70 20.2556 0.038
sll1699 Forward -387 -368 11.9958 0.217
sll1698 Forward -38 -19 11.9958 0.217
slr1747 Forward -72 -53 26.5488 0.00003
slr1747 Reverse -60 -79 19.174 0.0559
slr0868 Reverse -12 -31 15.7324 0.133
sll1957 Forward -262 -243 12.7825 0.208
slr2057 Reverse -110 -129 12.7825 0.208
slr0270 Reverse -50 -69 10.1275 0.288
ssl0453 Forward -342 -323 18.584 0.0578
ssl0452 Forward -67 -48 18.584 0.0578
slr2080 Reverse -129 -148 11.7008 0.217
sll0819 Forward -232 -213 23.0089 0.00548
sll1894 Forward -112 -93 11.9958 0.217
slr1966 Reverse -121 -140 11.9958 0.217
sll1882 Forward -107 -88 11.6025 0.217
slr1975 Reverse -137 -156 11.6025 0.217
ssl2153 Forward -330 -311 10.0292 0.288
slr1162 Reverse -90 -109 10.0292 0.288
sll1566 Forward -397 -378 13.5691 0.172
sll1538 Reverse -16 -35 14.0608 0.16
sll1533 Reverse -241 -260 10.0292 0.288
slr1634 Forward -356 -337 10.0292 0.288
slr1638 Reverse -72 -91 14.2574 0.158
sll0257 Reverse -120 -139 14.2574 0.158
slr0293 Forward -60 -41 14.2574 0.158
ssl0707 Reverse -85 -104 11.4058 0.217
slr0404 Forward -218 -199 11.4058 0.217
sll0944 Reverse -63 -82 21.1406 0.0238
slr0320 Forward -83 -64 21.1406 0.0238
sll0764 Forward -149 -130 10.3242 0.278
sll0198 Reverse -104 -123 13.9625 0.16
slr0228 Forward -170 -151 13.9625 0.16
sll0381 Reverse -361 -380 12.0942 0.217
ssr0692 Forward -114 -95 12.0942 0.217
sll0368 Reverse -116 -135 12.3892 0.217
slr0426 Forward -221 -202 12.3892 0.217
slr0898 Reverse -46 -65 18.289 0.0587
slr0898 Reverse -111 -130 14.8474 0.157
slr0898 Forward -68 -49 10.7175 0.245
sll0829 Reverse -59 -78 10.9142 0.24
slr0839 Forward -54 -35 10.9142 0.24
slr0842 Forward -98 -79 11.7008 0.217
sll0484 Forward -127 -108 16.5191 0.105
slr0502 Reverse -4 -23 16.5191 0.105
sll0586 Forward -83 -64 16.0274 0.121
slr0623 Reverse -281 -300 16.0274 0.121
sll0283 Reverse -339 -358 18.6823 0.0578
slr0309 Forward -151 -132 18.6823 0.0578
sll0788 Forward -100 -81 11.3075 0.217
slr0799 Reverse -122 -141 11.3075 0.217
sll0672 Forward -153 -134 11.1109 0.231
sll0528 Reverse -6 -25 14.5524 0.158
slr0556 Forward -124 -105 14.5524 0.158
slr1463 Forward -169 -150 10.0292 0.288
sll1481 Forward -50 -31 16.7157 0.103
sll1473 Forward -77 -58 18.584 0.0578
sll1471 Reverse -152 -171 11.6025 0.217
slr1584 Forward -87 -68 11.6025 0.217
sll0451 Forward -136 -117 10.4225 0.27
sll5003 Forward -353 -334 13.7658 0.164
sll5004 Forward -67 -48 13.7658 0.164
slr5005 Forward -119 -100 9.93088 0.29
ssl5091 Reverse -172 -191 18.3873 0.0583
ssr5092 Forward -200 -181 18.3873 0.0583
ssl7045 Reverse -290 -309 14.7491 0.157
ssl7046 Reverse -10 -29 14.7491 0.157
slr6012 Forward -330 -311 11.4058 0.217
slr6071 Forward -330 -311 11.4058 0.217
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.727  0.000  0.000  0.273  
0.727 0.000 0.000 0.273
0.273 0.182 0.091 0.455
0.000 0.455 0.000 0.545
0.000 0.000 1.000 0.000
0.000 0.000 0.000 1.000
0.091 0.182 0.000 0.727
1.000 0.000 0.000 0.000
0.364 0.636 0.000 0.000
0.636 0.091 0.273 0.000
0.909 0.000 0.000 0.091
0.000 0.000 0.182 0.818
0.364 0.091 0.000 0.545
0.182 0.455 0.182 0.182
0.273 0.000 0.182 0.545
0.000 0.000 0.000 1.000
0.545 0.000 0.091 0.364
0.727 0.182 0.000 0.091
0.273 0.364 0.000 0.364
0.818 0.000 0.182 0.000