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Details for NP_441097.1_2

Name NP_441097.1_2
Length 18
Regular expression CCA[AG][CG]G[GAT][TG][AG][GT]GG[AG][TG]T[TG]GG
Central Yes

Motif logo

Genes containing this motif

358 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0612 Forward -349 -332 7.31533 0.245
sll1405 Forward -132 -115 8.39697 0.236
slr1491 Forward -291 -274 6.03703 0.257
slr1117 Reverse -173 -190 4.95539 0.274
sll1063 Reverse -331 -348 6.33202 0.257
slr1119 Reverse -289 -306 4.6604 0.278
sll1057 Forward -43 -26 13.3135 0.142
sll1053 Reverse -321 -338 4.95539 0.274
slr0721 Forward -232 -215 9.18362 0.223
sll0712 Reverse -141 -158 3.0871 0.293
sll0708 Forward -86 -69 4.46374 0.278
sll0708 Forward -391 -374 2.79211 0.298
sll0702 Reverse -262 -279 14.2968 0.126
slr0743a Forward -103 -86 4.46374 0.278
slr0744 Reverse -222 -239 12.7235 0.152
slr0250 Forward -124 -107 3.57876 0.293
ssr0390 Forward -281 -264 4.3654 0.28
sll0222 Reverse -125 -142 7.41366 0.245
slr0254 Forward -396 -379 7.41366 0.245
sll1327 Forward -123 -106 3.18543 0.293
slr1414 Forward -325 -308 10.1669 0.223
slr1415 Forward -188 -171 6.82368 0.247
sll1319 Reverse -60 -77 14.0018 0.135
slr1097 Reverse -39 -56 13.6085 0.142
slr1100 Reverse -225 -242 3.87375 0.291
slr1776 Forward -365 -348 8.59364 0.236
slr1778 Forward -126 -109 7.80699 0.238
slr1780 Forward -250 -233 9.97027 0.223
slr1791 Reverse -56 -73 8.49531 0.236
sll1670 Reverse -192 -209 11.0519 0.193
ssr3000 Forward -234 -217 13.1169 0.148
sll1663 Reverse -28 -45 7.02034 0.245
sll1659 Reverse -215 -232 6.52869 0.257
slr1290 Forward -340 -323 6.92201 0.245
sll1200 Reverse -339 -356 11.2486 0.193
sll1193 Reverse -203 -220 4.46374 0.278
slr1303 Reverse -28 -45 3.67709 0.293
slr0977 Forward -79 -62 22.36 0.0313
slr1610 Reverse -262 -279 3.18543 0.293
sll0647 Reverse -336 -353 16.2635 0.11
ssr1155 Forward -79 -62 4.85706 0.276
slr0689 Forward -296 -279 4.85706 0.276
slr0695 Forward -389 -372 6.33202 0.257
slr1591 Forward -53 -36 7.90532 0.238
sll1514 Reverse -275 -292 8.7903 0.236
sll1512 Reverse -293 -310 7.217 0.245
slr1600 Reverse -376 -393 14.9851 0.125
slr1041 Reverse -96 -113 9.47861 0.223
slr1043 Forward -164 -147 3.28376 0.293
slr1052 Forward -340 -323 3.77542 0.293
sll1006 Reverse -37 -54 3.48043 0.293
sll1001 Forward -78 -61 3.87375 0.291
sll1639 Reverse -367 -384 17.4434 0.103
slr1849 Forward -319 -302 6.13536 0.257
sll1946 Reverse -77 -94 6.43035 0.257
slr2032 Forward -57 -40 6.43035 0.257
sll1937 Forward -383 -366 9.97027 0.223
sll1934 Reverse -57 -74 5.34871 0.259
slr2053 Forward -75 -58 5.34871 0.259
sll1933 Forward -328 -311 11.9369 0.185
slr1911 Reverse -302 -319 5.44704 0.259
slr1918 Forward -275 -258 8.39697 0.236
slr1918 Forward -229 -212 3.57876 0.293
sll1830 Forward -168 -151 3.18543 0.293
sll0997 Reverse -343 -360 3.48043 0.293
sll0996 Reverse -72 -89 7.11867 0.245
slr1020 Reverse -243 -260 10.5603 0.203
slr1020 Forward -53 -36 7.11867 0.245
ssr1698 Forward -279 -262 4.75873 0.276
slr1022 Forward -352 -335 9.47861 0.223
slr1023 Forward -344 -327 4.3654 0.28
slr1030 Forward -341 -324 7.217 0.245
slr1033 Reverse -330 -347 6.23369 0.257
sll0984 Reverse -256 -273 3.97208 0.291
slr1377 Forward -279 -262 2.89044 0.293
sll1300 Reverse -154 -171 3.67709 0.293
sll1289 Forward -285 -268 2.89044 0.293
slr1393 Forward -374 -357 2.89044 0.293
slr1394 Forward -277 -260 5.54538 0.259
slr1394 Forward -276 -259 5.34871 0.259
slr1702 Forward -72 -55 3.48043 0.293
slr2010 Reverse -383 -400 4.46374 0.278
sll1920 Reverse -326 -343 9.77361 0.223
sll1916 Reverse -227 -244 5.74204 0.259
slr2027 Forward -122 -105 2.89044 0.293
slr1137 Reverse -102 -119 12.8219 0.151
slr1148 Forward -365 -348 4.3654 0.28
sll1818 Reverse -140 -157 4.56207 0.278
sll1811 Forward -326 -309 5.44704 0.259
sll1806 Reverse -321 -338 3.38209 0.293
ssl3437 Reverse -52 -69 3.38209 0.293
sll1797 Reverse -331 -348 5.9387 0.257
slr1900 Forward -297 -280 4.56207 0.278
slr1902 Reverse -332 -349 3.77542 0.293
sll1119 Reverse -270 -287 5.84037 0.257
slr1206 Reverse -57 -74 8.7903 0.236
slr1206 Reverse -5 -22 4.85706 0.276
slr1208 Reverse -129 -146 6.03703 0.257
slr1210 Forward -214 -197 5.54538 0.259
slr1213 Forward -182 -165 20.885 0.0525
ssl3335 Forward -264 -247 10.6586 0.2
sll1469 Forward -217 -200 3.77542 0.293
sll1459 Reverse -293 -310 8.59364 0.236
sll1632 Reverse -293 -310 8.20031 0.236
slr1232 Reverse -297 -314 5.25038 0.263
slr1235 Reverse -77 -94 15.0835 0.125
slr1444 Reverse -38 -55 3.77542 0.293
sll1276 Reverse -193 -210 3.87375 0.291
sll1275 Reverse -122 -139 3.57876 0.293
slr1362 Forward -66 -49 3.57876 0.293
sll1268 Reverse -85 -102 6.03703 0.257
slr0879 Forward -366 -349 5.15205 0.269
sll0871 Forward -146 -129 3.0871 0.293
slr0884 Reverse -170 -187 3.0871 0.293
slr0889 Reverse -48 -65 9.67528 0.223
slr0891 Forward -316 -299 3.38209 0.293
sll1314 Reverse -96 -113 3.48043 0.293
slr1403 Forward -288 -271 3.48043 0.293
slr1409 Reverse -259 -276 7.02034 0.245
slr1874 Forward -162 -145 4.95539 0.274
ssl3379 Reverse -333 -350 9.38028 0.223
slr1876 Reverse -259 -276 5.9387 0.257
sll1765 Forward -270 -253 4.75873 0.276
sll1761 Reverse -203 -220 8.20031 0.236
slr1882 Reverse -358 -375 3.87375 0.291
sll2013 Reverse -276 -293 16.2635 0.11
sml0007 Forward -76 -59 5.34871 0.259
slr2141 Reverse -4 -21 5.34871 0.259
sll1708 Forward -236 -219 3.28376 0.293
sll1699 Forward -265 -248 2.79211 0.298
slr1816 Reverse -258 -275 7.11867 0.245
sll1696 Forward -113 -96 5.64371 0.259
sll1628 Forward -246 -229 6.03703 0.257
slr1738 Forward -394 -377 28.3582 0.00014
slr0852 Reverse -273 -290 6.72535 0.25
sll0856 Forward -66 -49 9.57695 0.223
slr0868 Reverse -293 -310 3.48043 0.293
sll1164 Reverse -203 -220 6.92201 0.245
slr1254 Forward -259 -242 3.77542 0.293
slr1257 Reverse -46 -63 9.38028 0.223
sll1961 Forward -118 -101 6.13536 0.257
slr2004 Reverse -122 -139 4.75873 0.276
sll1609 Reverse -352 -369 2.89044 0.293
sll1586 Reverse -106 -123 3.28376 0.293
slr0269 Reverse -213 -230 4.16874 0.283
sll0241 Reverse -65 -82 17.2468 0.103
sll0240 Reverse -367 -384 6.13536 0.257
sll0240 Forward -209 -192 5.44704 0.259
sll0238 Forward -400 -383 11.4452 0.193
sll1988 Forward -232 -215 3.87375 0.291
slr2089 Reverse -63 -80 4.75873 0.276
slr2104 Forward -349 -332 3.97208 0.291
sll1426 Reverse -153 -170 5.34871 0.259
sll1423 Forward -274 -257 2.89044 0.293
slr1506 Reverse -161 -178 2.89044 0.293
slr1517 Reverse -79 -96 5.9387 0.257
slr2108 Forward -50 -33 5.05372 0.272
sll1234 Forward -191 -174 2.98877 0.293
ssr2201 Reverse -90 -107 2.98877 0.293
slr1327 Reverse -298 -315 2.98877 0.293
ssr2227 Reverse -359 -376 3.28376 0.293
sll1217 Forward -361 -344 5.05372 0.272
slr0804 Reverse -307 -324 5.05372 0.272
slr0808 Forward -289 -272 9.47861 0.223
ssl1520 Reverse -279 -296 14.2968 0.126
sll0813 Reverse -57 -74 10.9536 0.193
slr0812 Forward -23 -6 10.9536 0.193
slr0823 Reverse -286 -303 7.11867 0.245
slr1348 Reverse -353 -370 5.84037 0.257
ssl3580 Forward -217 -200 14.5918 0.126
sll1898 Forward -31 -14 3.18543 0.293
slr1959 Reverse -219 -236 3.18543 0.293
slr1977 Forward -174 -157 3.48043 0.293
slr1978 Forward -347 -330 4.46374 0.278
slr1984 Reverse -233 -250 16.4601 0.11
ssl2717 Reverse -145 -162 5.34871 0.259
ssl2717 Reverse -125 -142 3.97208 0.291
sll1388 Forward -28 -11 3.18543 0.293
slr1468 Reverse -221 -238 4.56207 0.278
sll1372 Forward -165 -148 3.38209 0.293
sll1178 Reverse -337 -354 8.49531 0.236
slr1267 Forward -355 -338 8.49531 0.236
slr1275 Forward -295 -278 10.3636 0.213
slr1275 Forward -116 -99 4.16874 0.283
slr1276 Forward -267 -250 4.16874 0.283
sll1442 Reverse -226 -243 4.3654 0.28
sll1439 Reverse -354 -371 15.0835 0.125
slr1531 Forward -106 -89 15.0835 0.125
sll1097 Reverse -382 -399 10.0686 0.223
slr1159 Forward -191 -174 6.82368 0.247
slr1159 Forward -119 -102 5.74204 0.259
slr1171 Reverse -367 -384 10.7569 0.2
ssr1951 Reverse -364 -381 3.38209 0.293
sll1085 Forward -73 -56 11.0519 0.193
slr1673 Forward -188 -171 2.89044 0.293
slr1679 Reverse -279 -296 3.28376 0.293
sll1559 Reverse -370 -387 11.8386 0.185
sll1555 Reverse -358 -375 9.28195 0.223
ssr2831 Forward -220 -203 9.28195 0.223
slr0957 Forward -278 -261 2.89044 0.293
sll0905 Reverse -120 -137 4.16874 0.283
sll1537 Reverse -208 -225 5.54538 0.259
slr1627 Forward -270 -253 5.54538 0.259
sll1532 Forward -240 -223 11.7402 0.185
slr1635 Reverse -127 -144 11.7402 0.185
slr1638 Forward -19 -2 5.9387 0.257
sll1520 Forward -208 -191 7.512 0.245
sll0419 Reverse -258 -275 11.0519 0.193
sll0264 Forward -18 -1 12.1336 0.176
slr0285 Reverse -82 -99 4.95539 0.274
ssl0483 Forward -372 -355 7.41366 0.245
slr0395 Reverse -336 -353 2.79211 0.298
slr0399 Reverse -187 -204 11.0519 0.193
slr0401 Forward -193 -176 6.92201 0.245
slr0401 Reverse -8 -25 3.67709 0.293
slr0407 Forward -71 -54 4.16874 0.283
slr0152 Forward -196 -179 13.3135 0.142
sll0148 Reverse -213 -230 6.23369 0.257
slr1926 Reverse -220 -237 3.67709 0.293
slr1928 Forward -103 -86 3.18543 0.293
slr1930 Reverse -353 -370 6.92201 0.245
slr1930 Reverse -349 -366 3.0871 0.293
slr1934 Reverse -339 -356 5.74204 0.259
sll1854 Reverse -111 -128 8.29864 0.236
sll1849 Reverse -267 -284 8.49531 0.236
slr1946 Forward -42 -25 6.13536 0.257
ssl0564 Forward -292 -275 4.85706 0.276
slr0333 Reverse -217 -234 7.61033 0.242
slr0169 Forward -274 -257 6.82368 0.247
sll0163 Reverse -172 -189 5.25038 0.263
slr0370 Reverse -138 -155 12.1336 0.176
slr0773 Reverse -374 -391 5.25038 0.263
ssl1426 Reverse -263 -280 3.0871 0.293
slr1003 Reverse -335 -352 2.89044 0.293
sll0755 Reverse -223 -240 4.3654 0.28
sll0754 Reverse -256 -273 3.38209 0.293
ssl1417 Forward -307 -290 3.0871 0.293
sll0752 Forward -54 -37 9.18362 0.223
sll0752 Forward -260 -243 6.23369 0.257
slr0782 Reverse -372 -389 6.23369 0.257
slr0344 Reverse -263 -280 4.16874 0.283
sll0320 Reverse -67 -84 3.28376 0.293
sll0319 Reverse -324 -341 8.88863 0.236
slr0357 Forward -187 -170 8.69197 0.236
sll0020 Reverse -84 -101 14.3952 0.126
sll0020 Forward -21 -4 9.18362 0.223
slr0008 Forward -135 -118 5.84037 0.257
slr0009 Reverse -42 -59 3.48043 0.293
slr0216 Reverse -356 -373 3.0871 0.293
slr0217 Forward -306 -289 4.07041 0.286
sll0200 Reverse -333 -350 2.89044 0.293
sll0198 Reverse -72 -89 4.56207 0.278
slr0228 Forward -202 -185 4.56207 0.278
slr0431 Forward -291 -274 4.75873 0.276
sll0402 Forward -286 -269 4.46374 0.278
sll0401 Reverse -203 -220 23.245 0.0261
ssr0109 Forward -185 -168 7.80699 0.238
slr0053 Forward -378 -361 7.80699 0.238
slr0054 Reverse -162 -179 19.705 0.0607
sll0060 Forward -161 -144 2.89044 0.293
sll0051 Reverse -324 -341 5.34871 0.259
slr0484 Forward -83 -66 3.67709 0.293
slr0495 Reverse -339 -356 2.98877 0.293
sll0686 Reverse -302 -319 8.10198 0.236
sll0679 Reverse -17 -34 2.89044 0.293
slr0719 Forward -241 -224 2.89044 0.293
sll0606 Forward -245 -228 7.61033 0.242
sll0606 Forward -203 -186 6.92201 0.245
sll0606 Reverse -265 -282 3.18543 0.293
sll0606 Forward -204 -187 2.98877 0.293
sll0379 Reverse -220 -237 8.29864 0.236
sll0374 Reverse -45 -62 9.47861 0.223
sll0370 Forward -351 -334 3.57876 0.293
sll0188 Forward -121 -104 7.61033 0.242
slr0191 Reverse -76 -93 7.61033 0.242
ssl0353 Forward -295 -278 4.26707 0.283
slr0209 Forward -160 -143 3.28376 0.293
slr0906 Forward -373 -356 5.84037 0.257
slr0913 Reverse -167 -184 5.84037 0.257
slr0919 Reverse -205 -222 8.10198 0.236
sll0891 Reverse -71 -88 10.9536 0.193
sll0891 Reverse -72 -89 4.46374 0.278
sll0555 Forward -239 -222 9.28195 0.223
sll0554 Reverse -214 -231 13.6085 0.142
slr1002 Forward -304 -287 4.16874 0.283
slr0825 Reverse -151 -168 3.38209 0.293
sll0830 Forward -366 -349 8.10198 0.236
slr0839 Reverse -315 -332 4.75873 0.276
slr0072 Reverse -97 -114 3.87375 0.291
sll0088 Forward -305 -288 7.31533 0.245
sll0084 Forward -393 -376 4.26707 0.283
slr0082 Reverse -46 -63 7.80699 0.238
sll0080 Reverse -292 -309 5.34871 0.259
slr0088 Reverse -297 -314 19.3117 0.0607
slr0096 Reverse -48 -65 11.3469 0.193
sll0489 Forward -338 -321 8.69197 0.236
sll0489 Forward -337 -320 7.11867 0.245
sll0485 Reverse -18 -35 12.9202 0.15
sll0482 Forward -100 -83 4.75873 0.276
slr0516 Forward -366 -349 5.44704 0.259
sll0473 Reverse -184 -201 3.67709 0.293
sll0102 Reverse -231 -248 13.3135 0.142
slr0105 Forward -115 -98 13.3135 0.142
sll0095 Forward -166 -149 4.56207 0.278
slr0119 Forward -53 -36 8.39697 0.236
slr0120 Reverse -295 -312 3.67709 0.293
sll0290 Reverse -318 -335 5.84037 0.257
slr0298 Forward -323 -306 3.18543 0.293
slr0312 Forward -158 -141 4.6604 0.278
sll0659 Forward -323 -306 9.67528 0.223
ssl1255 Forward -296 -279 9.87194 0.223
sll0044 Forward -291 -274 10.0686 0.223
sll0043 Forward -260 -243 5.34871 0.259
sll0036 Reverse -85 -102 4.07041 0.286
slr0534 Forward -138 -121 9.08529 0.226
slr0534 Forward -223 -206 7.31533 0.245
sll0497 Forward -86 -69 2.98877 0.293
slr0545 Reverse -91 -108 2.98877 0.293
slr0926 Reverse -217 -234 15.9685 0.113
slr0926 Reverse -312 -329 4.07041 0.286
slr0926 Reverse -218 -235 3.77542 0.293
slr0930 Forward -308 -291 11.2486 0.193
sll0537 Reverse -129 -146 3.57876 0.293
sll0529 Forward -57 -40 6.62702 0.252
slr0557 Reverse -291 -308 13.0185 0.149
sll0520 Reverse -45 -62 9.87194 0.223
sll1344 Reverse -193 -210 3.0871 0.293
ssr2439 Forward -155 -138 8.20031 0.236
slr1457 Reverse -184 -201 3.57876 0.293
sll0631 Reverse -382 -399 3.48043 0.293
sll0630 Reverse -315 -332 5.05372 0.272
sll0624 Reverse -145 -162 7.90532 0.238
slr0662 Forward -270 -253 7.90532 0.238
sll1498 Forward -267 -250 3.87375 0.291
sll1495 Forward -91 -74 5.44704 0.259
slr1559 Reverse -189 -206 5.44704 0.259
slr1568 Reverse -60 -77 8.20031 0.236
sll1479 Forward -301 -284 4.56207 0.278
sll1472 Reverse -288 -305 10.6586 0.2
sll0735 Reverse -339 -356 3.38209 0.293
slr0750 Forward -57 -40 3.0871 0.293
sll1550 Reverse -345 -362 4.6604 0.278
sll1547 Reverse -159 -176 3.18543 0.293
sll0451 Reverse -178 -195 19.5084 0.0607
ssl0832 Forward -294 -277 6.13536 0.257
slr0454 Reverse -361 -378 6.13536 0.257
slr0590 Forward -178 -161 4.16874 0.283
sll0572 Forward -197 -180 3.28376 0.293
slr0592 Reverse -111 -128 3.28376 0.293
sll0564 Reverse -227 -244 3.38209 0.293
slr0599 Forward -160 -143 3.38209 0.293
sll5003 Forward -200 -183 7.61033 0.242
slr5005 Reverse -282 -299 3.38209 0.293
sll5043 Forward -250 -233 6.03703 0.257
ssl5045 Forward -298 -281 3.18543 0.293
sll5052 Reverse -248 -265 6.72535 0.25
sll5076 Forward -236 -219 3.0871 0.293
ssl7007 Forward -376 -359 6.43035 0.257
slr7008 Reverse -274 -291 6.43035 0.257
slr7025 Reverse -296 -313 6.62702 0.252
ssl7038 Forward -178 -161 4.07041 0.286
ssl7039 Reverse -203 -220 4.6604 0.278
ssr7040 Reverse -241 -258 4.07041 0.286
slr7041 Forward -157 -140 4.6604 0.278
sll7050 Reverse -131 -148 4.16874 0.283
slr7052 Forward -386 -369 4.26707 0.283
slr7052 Forward -220 -203 4.16874 0.283
sll7055 Reverse -101 -118 6.62702 0.252
slr7060 Reverse -141 -158 12.3302 0.172
ssr6046 Reverse -312 -329 7.11867 0.245
6803t02 Forward -265 -248 5.54538 0.259
6803t06 Forward -265 -248 6.33202 0.257
6803t09 Forward -80 -63 10.6586 0.2
6803t11 Reverse -284 -301 8.00365 0.238
6803t12 Forward -265 -248 3.87375 0.291
6803t28 Reverse -157 -174 2.89044 0.293
6803t29 Forward -241 -224 2.79211 0.298
6803t39 Forward -340 -323 2.89044 0.293
6803t40 Forward -241 -224 2.79211 0.298
6803t41 Forward -338 -321 14.7885 0.126
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 1.000 0.000 0.000
0.875 0.000 0.125 0.000
0.625 0.000 0.250 0.125
0.125 0.625 0.250 0.000
0.000 0.125 0.875 0.000
0.250 0.000 0.500 0.250
0.000 0.000 0.375 0.625
0.750 0.000 0.250 0.000
0.000 0.000 0.625 0.375
0.125 0.000 0.875 0.000
0.125 0.000 0.875 0.000
0.500 0.000 0.500 0.000
0.000 0.000 0.375 0.625
0.000 0.000 0.000 1.000
0.125 0.000 0.375 0.500
0.125 0.000 0.875 0.000
0.000 0.000 1.000 0.000