Your browser is old and dusty. Try Google Chrome!

Details for NP_441096.1_5

Name NP_441096.1_5
Length 19
Regular expression [CTA][CT][CT][GC][CTG][ATC]TC[TC][CT][CT][TC]T[TC][CT][TC]CTT
Central Yes

Motif logo

Genes containing this motif

102 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1315 Forward -272 -254 13.6864 0.297
sll1401 Forward -83 -65 14.8663 0.297
slr0721 Reverse -212 -230 18.7995 0.178
sll0708 Reverse -102 -120 14.3747 0.297
slr0250 Forward -38 -20 14.6697 0.297
sll0219 Forward -36 -18 19.4878 0.13
slr1411 Reverse -290 -308 15.7513 0.297
sll1326 Reverse -222 -240 13.4897 0.297
sll1039 Forward -116 -98 13.883 0.297
slr1095 Reverse -66 -84 13.883 0.297
slr1107 Reverse -142 -160 14.6697 0.297
sll1031 Forward -73 -55 13.7847 0.297
sll1683 Reverse -16 -34 13.4897 0.297
sll1673 Reverse -355 -373 14.473 0.297
slr1300 Reverse -262 -280 15.063 0.297
slr1090 Reverse -368 -386 14.8663 0.297
sll0646 Forward -263 -245 15.2596 0.297
ssl2923 Reverse -347 -365 15.7513 0.297
ssl2922 Reverse -119 -137 15.7513 0.297
sll1500 Reverse -84 -102 14.473 0.297
sll1643 Forward -30 -12 13.3914 0.297
slr1762 Reverse -214 -232 13.3914 0.297
sll1635 Forward -254 -236 14.5713 0.297
sll1945 Forward -173 -155 13.3914 0.297
slr2033 Reverse -63 -81 13.3914 0.297
sll1933 Reverse -308 -326 13.3914 0.297
slr1030 Forward -370 -352 16.8329 0.297
slr1704 Forward -83 -65 16.2429 0.297
slr2016 Reverse -101 -119 13.588 0.297
sll1797 Forward -180 -162 15.1613 0.297
sll1791 Reverse -5 -23 15.358 0.297
sll1965 Forward -217 -199 16.4396 0.297
slr2076 Reverse -314 -332 16.4396 0.297
sll1732 Forward -339 -321 14.768 0.297
slr1541 Reverse -111 -129 16.5379 0.297
slr1542 Reverse -195 -213 14.8663 0.297
slr1232 Forward -272 -254 14.8663 0.297
slr1232 Reverse -348 -366 13.6864 0.297
slr0878 Forward -103 -85 14.0797 0.297
slr1856 Forward -159 -141 15.2596 0.297
slr1878 Forward -44 -26 16.6363 0.297
sll1621 Forward -365 -347 17.3246 0.297
ssr2078 Reverse -34 -52 16.4396 0.297
ssr2078 Reverse -5 -23 15.358 0.297
slr1254 Reverse -332 -350 13.883 0.297
slr1257 Reverse -192 -210 13.6864 0.297
slr1718 Reverse -372 -390 18.7012 0.178
sll0254 Reverse -299 -317 15.948 0.297
slr2088 Forward -94 -76 13.3914 0.297
sll1415 Reverse -97 -115 17.3246 0.297
ssr2227 Reverse -201 -219 14.0797 0.297
sll1218 Reverse -175 -193 14.9646 0.297
sll1261 Reverse -179 -197 13.3914 0.297
slr1280 Forward -25 -7 13.4897 0.297
slr1166 Reverse -38 -56 14.0797 0.297
sll1087 Forward -289 -271 13.6864 0.297
slr1684 Reverse -11 -29 17.2262 0.297
sll1558 Reverse -149 -167 14.2763 0.297
slr1629 Reverse -116 -134 15.358 0.297
sll0422 Forward -113 -95 16.6363 0.297
slr1928 Forward -191 -173 17.1279 0.297
sll1853 Forward -26 -8 13.6864 0.297
sll1852 Reverse -322 -340 13.7847 0.297
slr0990 Forward -60 -42 13.7847 0.297
sll0945 Reverse -113 -131 14.473 0.297
slr0388 Forward -219 -201 15.063 0.297
sll0321 Reverse -193 -211 13.4897 0.297
sll0071 Reverse -177 -195 13.588 0.297
slr0064 Reverse -220 -238 14.2763 0.297
slr0467 Reverse -187 -205 13.3914 0.297
sll0683 Forward -304 -286 15.1613 0.297
sll0680 Reverse -124 -142 15.2596 0.297
sll0613 Forward -295 -277 13.883 0.297
slr0650 Forward -72 -54 17.0296 0.297
sll0394 Forward -59 -41 14.9646 0.297
slr0415 Reverse -76 -94 14.9646 0.297
sll0547 Reverse -276 -294 15.4563 0.297
sll0103 Reverse -381 -399 13.3914 0.297
sll0103 Reverse -201 -219 13.3914 0.297
slr0306 Reverse -380 -398 14.6697 0.297
sll0800 Forward -107 -89 13.7847 0.297
sll0788 Forward -155 -137 15.358 0.297
slr0799 Reverse -67 -85 15.358 0.297
sll0776 Reverse -109 -127 16.5379 0.297
slr0702 Reverse -372 -390 13.588 0.297
sll0504 Forward -189 -171 15.653 0.297
slr0929 Forward -24 -6 14.3747 0.297
sll0900 Reverse -128 -146 13.883 0.297
ssl1004 Reverse -369 -387 14.178 0.297
slr0664 Reverse -24 -42 14.3747 0.297
slr1583 Forward -207 -189 16.3413 0.297
sll1546 Forward -34 -16 13.6864 0.297
sll1110 Reverse -52 -70 19.8812 0.117
slr0605 Reverse -207 -225 13.7847 0.297
sll7069 Reverse -112 -130 13.883 0.297
slr7071 Forward -391 -373 13.883 0.297
sll8007 Reverse -218 -236 14.8663 0.297
ssl8008 Reverse -10 -28 14.8663 0.297
ssl6018 Reverse -319 -337 13.6864 0.297
ssr6020 Forward -104 -86 13.6864 0.297
slr6021 Reverse -101 -119 20.5695 0.0843
slr6021 Forward -399 -381 13.6864 0.297
ssl6077 Reverse -319 -337 13.6864 0.297
ssr6079 Forward -104 -86 13.6864 0.297
slr6080 Reverse -101 -119 20.5695 0.0843
slr6080 Forward -399 -381 13.6864 0.297
6803t05 Reverse -321 -339 15.653 0.297
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.231  0.385  0.000  0.385  
0.000 0.615 0.000 0.385
0.000 0.692 0.000 0.308
0.000 0.462 0.538 0.000
0.000 0.385 0.231 0.385
0.385 0.231 0.077 0.308
0.154 0.000 0.154 0.692
0.077 0.769 0.000 0.154
0.154 0.308 0.154 0.385
0.077 0.615 0.077 0.231
0.000 0.538 0.000 0.462
0.000 0.231 0.000 0.769
0.000 0.000 0.154 0.846
0.077 0.385 0.077 0.462
0.000 0.615 0.154 0.231
0.000 0.385 0.077 0.538
0.000 1.000 0.000 0.000
0.000 0.077 0.000 0.923
0.077 0.000 0.000 0.923