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Details for NP_441057.1_3

Name NP_441057.1_3
Length 20
Regular expression TTTCAGC[CG][AG]GG[TCG]TTTGC[CT]CA
Central No

Motif logo

Genes containing this motif

263 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0612 Forward -365 -346 -10.227 0.214
slr1120 Reverse -29 -48 -11.7019 0.24
sll1058 Reverse -300 -319 -11.2103 0.223
sll0716 Forward -86 -67 -2.36049 0.159
slr0721 Reverse -117 -136 -2.36049 0.159
slr0730 Forward -115 -96 -11.9969 0.25
sll0704 Forward -126 -107 -11.3086 0.223
slr0732 Reverse -50 -69 -11.3086 0.223
slr0741 Reverse -107 -126 -12.5869 0.255
slr0238 Forward -45 -26 -12.1936 0.255
slr0241 Reverse -321 -340 -1.47551 0.138
slr0244 Forward -396 -377 -1.7705 0.138
sll0224 Forward -399 -380 -2.55715 0.159
slr0249 Reverse -173 -192 -2.55715 0.159
ssr0390 Reverse -243 -262 -13.8652 0.299
sll0216 Reverse -73 -92 -11.8986 0.247
sll1035 Reverse -176 -195 -12.2919 0.255
slr1106 Forward -59 -40 -12.2919 0.255
sll1685 Forward -32 -13 -9.93197 0.205
slr1777 Reverse -137 -156 -9.93197 0.205
sll1680 Reverse -307 -326 -10.9153 0.214
sll1677 Reverse -9 -28 -12.3902 0.255
sll1669 Forward -368 -349 -10.4236 0.214
slr1795 Forward -223 -204 -12.6852 0.257
ssr3000 Forward -341 -322 -10.7186 0.214
sll1660 Reverse -272 -291 -10.3253 0.214
slr1800 Reverse -313 -332 -2.36049 0.159
sll1193 Reverse -55 -74 -3.44213 0.187
sll1193 Forward -354 -335 -12.6852 0.257
sll0939 Reverse -18 -37 -12.9802 0.265
sll0933 Forward -135 -116 -13.6686 0.297
ssl1784 Forward -200 -181 -9.53865 0.205
sll0932 Forward -25 -6 -12.8819 0.262
ssr1789 Reverse -164 -183 -12.4886 0.255
slr0677 Reverse -188 -207 7.7676 0.0829
slr0686 Reverse -239 -258 -11.8003 0.24
sll0639 Reverse -326 -345 -1.27885 0.138
slr0692 Forward -337 -318 -12.2919 0.255
slr1590 Forward -373 -354 7.86593 0.0829
sll1512 Reverse -14 -33 -11.6036 0.237
slr1598 Forward -241 -222 -11.6036 0.237
sll1502 Forward -285 -266 -2.65548 0.159
ssr2711 Reverse -340 -359 -2.65548 0.159
sll1500 Reverse -2 -21 -11.0136 0.214
slr1609 Forward -81 -62 -11.8003 0.24
sll1006 Forward -393 -374 -12.5869 0.255
sll1003 Reverse -17 -36 -12.3902 0.255
sll1647 Forward -231 -212 -11.2103 0.223
slr1759 Forward -209 -190 -13.4719 0.285
sll1643 Reverse -340 -359 -13.8652 0.299
sll1751 Forward -398 -379 -13.8652 0.299
slr2035 Forward -53 -34 -1.57384 0.138
slr2051 Reverse -112 -131 -12.4886 0.255
sll1929 Forward -198 -179 -11.4069 0.231
sll0980 Reverse -138 -157 -10.817 0.214
slr1393 Forward -260 -241 -12.1936 0.255
sll1285 Forward -303 -284 -12.0953 0.255
sll1584 Reverse -362 -381 -11.8986 0.247
ssr3410 Reverse -165 -184 -11.7019 0.24
sll1084 Reverse -342 -361 -13.3736 0.283
ssl3446 Forward -293 -274 -12.4886 0.255
slr1899 Forward -57 -38 -11.6036 0.237
slr1900 Reverse -203 -222 -11.6036 0.237
sll1786 Reverse -331 -350 -12.4886 0.255
sll1120 Forward -327 -308 -11.5053 0.236
slr1206 Reverse -340 -359 -11.8003 0.24
sll1743 Reverse -134 -153 -12.0953 0.255
sll1738 Forward -228 -209 -2.65548 0.159
slr1830 Reverse -92 -111 -3.73712 0.187
sll1735 Forward -329 -310 -11.8986 0.247
sll1713 Reverse -292 -311 -12.9802 0.265
slr1543 Forward -139 -120 -13.0786 0.269
slr1552 Forward -116 -97 -12.0953 0.255
slr1552 Reverse -248 -267 -13.7669 0.299
slr1229 Reverse -350 -369 -12.1936 0.255
sll1132 Forward -198 -179 -13.8652 0.299
slr1437 Reverse -127 -146 -11.3086 0.223
sll1360 Forward -268 -249 -11.7019 0.24
sll1270 Forward -214 -195 -13.8652 0.299
sll1267 Forward -255 -236 -11.0136 0.214
sll0876 Forward -248 -229 -11.1119 0.223
sll0868 Reverse -378 -397 -12.8819 0.262
sll0867 Forward -357 -338 -12.2919 0.255
slr0889 Forward -252 -233 -11.6036 0.237
slr1855 Reverse -32 -51 -10.7186 0.214
sll1771 Forward -120 -101 -12.1936 0.255
ssl3383 Reverse -199 -218 -10.7186 0.214
ssl3383 Reverse -324 -343 -12.3902 0.255
ssl3382 Reverse -102 -121 -12.3902 0.255
slr1879 Reverse -367 -386 -12.4886 0.255
slr1886 Reverse -160 -179 -4.42544 0.205
slr1888 Reverse -156 -175 -9.63698 0.205
sll2014 Forward -134 -115 -11.0136 0.214
sll2007 Reverse -11 -30 -2.26216 0.159
sll1703 Forward -363 -344 -11.0136 0.214
slr1807 Reverse -185 -204 -11.0136 0.214
sll1691 Reverse -142 -161 -13.5702 0.292
sll1688 Forward -341 -322 -11.8003 0.24
slr1820 Reverse -34 -53 -11.8003 0.24
sll1687 Reverse -301 -320 -11.9969 0.25
slr1822 Reverse -125 -144 -1.37718 0.138
sll1628 Reverse -62 -81 -12.3902 0.255
slr1734 Forward -102 -83 -12.3902 0.255
sll1624 Reverse -122 -141 -12.3902 0.255
slr1742 Reverse -228 -247 -11.3086 0.223
slr1746 Forward -206 -187 -11.3086 0.223
slr0851 Reverse -178 -197 -12.6852 0.257
slr0852 Reverse -41 -60 4.62101 0.138
slr0852 Forward -306 -287 -9.83364 0.205
slr1261 Reverse -222 -241 5.11266 0.138
slr1262 Forward -159 -140 -3.73712 0.187
slr2060 Forward -176 -157 -11.8986 0.247
slr1718 Reverse -244 -263 -11.9969 0.25
sll0250 Forward -321 -302 -13.1769 0.269
ssl0461 Forward -57 -38 -13.1769 0.269
sll0249 Forward -114 -95 -12.0953 0.255
sll0245 Reverse -204 -223 -12.0953 0.255
sll1979 Forward -336 -317 -13.3736 0.283
ssl2789 Reverse -319 -338 -11.2103 0.223
sll1423 Forward -223 -204 -11.2103 0.223
slr1506 Reverse -212 -231 -11.2103 0.223
slr1519 Forward -374 -355 -11.7019 0.24
slr2131 Forward -41 -22 -12.2919 0.255
sll1237 Forward -232 -213 -3.93378 0.192
sll1232 Reverse -55 -74 -12.3902 0.255
sll0812 Reverse -279 -298 -10.522 0.214
ssr1386 Forward -183 -164 -10.522 0.214
slr0819 Reverse -282 -301 -12.7836 0.26
sll0808 Forward -79 -60 -13.4719 0.285
slr0821 Reverse -342 -361 -13.4719 0.285
ssl1498 Forward -127 -108 -9.93197 0.205
sll1251 Forward -236 -217 -12.0953 0.255
sll1250 Forward -345 -326 -1.96717 0.147
slr1348 Reverse -52 -71 -11.3086 0.223
sll1890 Reverse -305 -324 -10.4236 0.214
slr1970 Reverse -323 -342 -4.22878 0.205
slr1971 Forward -96 -77 -11.7019 0.24
sll1886 Forward -310 -291 -12.1936 0.255
sll1880 Reverse -244 -263 -1.67217 0.138
sll1878 Forward -328 -309 -1.86883 0.139
sll1374 Reverse -267 -286 -13.8652 0.299
sll1371 Forward -74 -55 -12.6852 0.257
slr1288 Forward -45 -26 -11.5053 0.236
sll1442 Reverse -74 -93 -11.5053 0.236
sll1104 Forward -308 -289 -13.4719 0.285
ssl2153 Reverse -228 -247 -13.6686 0.297
sll0909 Forward -312 -293 -10.817 0.214
slr0952 Reverse -82 -101 7.66927 0.0829
slr1624 Forward -108 -89 -9.83364 0.205
slr1645 Forward -165 -146 -11.9969 0.25
ssr2754 Reverse -378 -397 -11.7019 0.24
slr0442 Forward -293 -274 -13.6686 0.297
sll0427 Reverse -185 -204 -11.3086 0.223
slr0443 Forward -42 -23 -11.3086 0.223
sll0269 Forward -319 -300 -10.6203 0.214
sll0268 Forward -267 -248 -12.7836 0.26
slr0397 Reverse -318 -337 -13.5702 0.292
slr0400 Forward -372 -353 -13.8652 0.299
slr0143 Reverse -3 -22 -12.8819 0.262
slr0992 Reverse -177 -196 -4.32711 0.205
ssr0536 Forward -239 -220 -10.4236 0.214
slr0337 Reverse -102 -121 -2.45882 0.159
slr0338 Reverse -346 -365 -2.16383 0.159
slr0168 Reverse -349 -368 -11.9969 0.25
sll0172 Reverse -65 -84 -12.9802 0.265
sll0167 Forward -187 -168 -11.4069 0.231
slr0185 Forward -331 -312 -3.73712 0.187
sll0767 Forward -357 -338 -11.4069 0.231
sll0765 Reverse -86 -105 -3.44213 0.187
slr1003 Forward -184 -165 -3.44213 0.187
sll0763 Reverse -184 -203 -11.8003 0.24
sll0312 Reverse -317 -336 -11.1119 0.223
sll0020 Reverse -120 -139 -13.1769 0.269
slr0014 Forward -258 -239 -1.86883 0.139
sll0204 Forward -347 -328 -1.67217 0.138
sll0192 Forward -383 -364 -12.1936 0.255
slr0233 Reverse -380 -399 -12.1936 0.255
ssl0787 Forward -147 -128 -13.4719 0.285
slr0434 Reverse -301 -320 -11.6036 0.237
sll0406 Forward -79 -60 -12.5869 0.255
sll0406 Reverse -207 -226 -12.7836 0.26
sll0401 Forward -361 -342 -11.0136 0.214
slr0066 Reverse -41 -60 -11.7019 0.24
sll0055 Reverse -340 -359 -0.983855 0.138
sll0461 Forward -32 -13 -10.817 0.214
slr0492 Forward -230 -211 -11.4069 0.231
sll0456 Forward -373 -354 -11.3086 0.223
slr0645 Forward -211 -192 -10.9153 0.214
sll0601 Forward -136 -117 -11.4069 0.231
slr0649 Reverse -249 -268 -11.4069 0.231
sll0396 Reverse -55 -74 -11.3086 0.223
sll0385 Forward -59 -40 -10.817 0.214
sll0383 Reverse -381 -400 -11.8003 0.24
sll0373 Forward -303 -284 -3.63879 0.187
slr0192 Reverse -51 -70 -12.5869 0.255
ssl0353 Reverse -351 -370 -12.5869 0.255
sll0180 Reverse -322 -341 -11.8003 0.24
ssr0336 Forward -173 -154 -11.9969 0.25
slr0900 Forward -235 -216 -10.3253 0.214
slr0905 Reverse -21 -40 -12.4886 0.255
slr0825 Forward -104 -85 -12.5869 0.255
slr0835 Forward -250 -231 -10.522 0.214
slr0842 Forward -139 -120 -11.6036 0.237
slr0077 Reverse -127 -146 -11.0136 0.214
slr0079 Reverse -153 -172 -11.6036 0.237
slr0092 Reverse -251 -270 -10.9153 0.214
sll0489 Reverse -268 -287 -11.5053 0.236
sll0484 Forward -73 -54 -12.2919 0.255
slr0502 Reverse -58 -77 -12.2919 0.255
sll0477 Reverse -370 -389 -13.2752 0.277
sll0467 Reverse -110 -129 -1.7705 0.138
slr0619 Forward -296 -277 -11.5053 0.236
sll0584 Forward -392 -373 -2.45882 0.159
sll0107 Forward -242 -223 -11.5053 0.236
sll0290 Reverse -280 -299 -13.7669 0.299
sll0289 Forward -292 -273 -10.817 0.214
slr0788 Forward -40 -21 -10.3253 0.214
sll0670 Reverse -283 -302 -5.11376 0.205
slr0707 Forward -280 -261 -5.11376 0.205
sll0660 Forward -372 -353 -11.3086 0.223
sll0045 Reverse -178 -197 -10.7186 0.214
sll0043 Reverse -37 -56 -10.7186 0.214
slr0044 Forward -290 -271 -11.8003 0.24
slr0527 Forward -116 -97 -13.0786 0.269
slr0528 Reverse -56 -75 -13.6686 0.297
slr0536 Reverse -278 -297 -11.2103 0.223
sll0501 Reverse -301 -320 -12.0953 0.255
sll0496 Reverse -304 -323 -12.3902 0.255
sll0494 Reverse -153 -172 -11.6036 0.237
slr0553 Reverse -353 -372 -12.1936 0.255
sll0528 Reverse -134 -153 -4.91709 0.205
sll1367 Forward -58 -39 -1.27885 0.138
slr1452 Reverse -171 -190 -1.27885 0.138
slr0655 Forward -240 -221 5.01433 0.138
slr1556 Reverse -77 -96 -11.8986 0.247
sll1491 Reverse -357 -376 -12.5869 0.255
slr1567 Forward -169 -150 -12.5869 0.255
slr1568 Reverse -229 -248 -12.2919 0.255
slr1579 Forward -319 -300 -13.1769 0.269
slr1579 Forward -129 -110 -13.7669 0.299
sll1477 Reverse -246 -265 -12.5869 0.255
sll1476 Forward -130 -111 -12.4886 0.255
slr1583 Reverse -52 -71 -12.4886 0.255
slr1583 Forward -392 -373 -12.5869 0.255
sll1471 Forward -293 -274 -11.1119 0.223
sll0733 Reverse -99 -118 -10.9153 0.214
slr0751 Forward -26 -7 -10.9153 0.214
slr0752 Forward -271 -252 -1.57384 0.138
slr0752 Forward -272 -253 -12.0953 0.255
ssr1256 Forward -333 -314 -10.522 0.214
slr0758 Forward -383 -364 -11.5053 0.236
sll1545 Reverse -93 -112 -11.9969 0.25
slr1664 Forward -84 -65 -11.9969 0.25
ssr2781 Reverse -53 -72 -2.65548 0.159
ssr2781 Forward -51 -32 -11.7019 0.24
sll0443 Reverse -37 -56 -11.8003 0.24
slr0451 Forward -366 -347 -11.8003 0.24
ssl0832 Reverse -316 -335 -1.47551 0.138
slr0454 Forward -339 -320 -1.47551 0.138
slr0598 Reverse -66 -85 -10.817 0.214
slr0598 Forward -257 -238 -11.8986 0.247
slr5056 Reverse -366 -385 -12.2919 0.255
slr5056 Reverse -160 -179 -13.0786 0.269
sll5061 Forward -78 -59 -11.2103 0.223
ssl5070 Reverse -205 -224 -4.6221 0.205
sll5122 Forward -352 -333 -13.1769 0.269
slr5124 Reverse -214 -233 -13.1769 0.269
sll7064 Reverse -285 -304 -11.9969 0.25
slr7081 Forward -205 -186 -11.7019 0.24
slr8022 Reverse -294 -313 -13.8652 0.299
ssl6092 Reverse -358 -377 -12.1936 0.255
6803t03 Reverse -337 -356 -13.7669 0.299
6803t11 Forward -124 -105 -3.83545 0.191
6803t35 Forward -245 -226 -9.63698 0.205
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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