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Details for NP_441043.1_10

Name NP_441043.1_10
Length 15
Regular expression [GA]TTGCT[CG]AC[GA]TG[GA]TT
Central No

Motif logo

Genes containing this motif

15 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1058 Reverse -22 -36 12.0943 0.296
slr1791 Forward -138 -124 16.0275 0.263
sll0994 Forward -319 -305 11.7993 0.296
slr2025 Reverse -279 -293 23.009 0.07
sll0296 Reverse -175 -189 14.1593 0.263
slr0064 Forward -359 -345 11.701 0.296
ssr1038 Reverse -15 -29 11.996 0.296
sll0661 Reverse -116 -130 11.701 0.296
slr1567 Forward -80 -66 11.996 0.296
ssl5091 Forward -370 -356 13.5693 0.263
ssr5092 Reverse -2 -16 13.5693 0.263
slr5093 Reverse -345 -359 13.5693 0.263
sll7043 Forward -313 -299 17.4042 0.187
sll6055 Reverse -58 -72 13.5693 0.263
slr6056 Forward -45 -31 13.5693 0.263
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.286  0.000  0.714  0.000  
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.143 0.857 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.571 0.429 0.000
1.000 0.000 0.000 0.000
0.143 0.857 0.000 0.000
0.286 0.000 0.714 0.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.286 0.000 0.714 0.000
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000