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Details for NP_441004.1_3

Name NP_441004.1_3
Length 20
Regular expression [GA][GA][TC]GG[TC]GG[CA]GG[CA]TT[CT]GTCAA
Central Yes

Motif logo

Genes containing this motif

169 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1317 Forward -145 -126 3.44104 0.261
sll1399 Forward -54 -35 2.0644 0.275
slr1495 Reverse -324 -343 2.0644 0.275
slr1117 Reverse -174 -193 3.04771 0.264
sll1064 Forward -141 -122 3.83436 0.252
sll1043 Forward -78 -59 7.37428 0.204
sll0716 Reverse -367 -386 1.37609 0.292
slr0237 Forward -312 -293 3.34271 0.261
sml0003 Forward -144 -125 1.47442 0.292
slr0245 Reverse -5 -24 1.47442 0.292
sll1325 Forward -168 -149 2.3594 0.266
slr1417 Reverse -80 -99 1.86774 0.282
slr1100 Forward -127 -108 5.01433 0.224
sll1032 Forward -325 -306 2.65439 0.265
sll1031 Forward -260 -241 4.62101 0.224
slr1780 Reverse -256 -275 1.27776 0.296
slr1783 Reverse -252 -271 1.37609 0.292
sll1675 Forward -325 -306 5.40766 0.224
ssr2998 Reverse -276 -295 4.42435 0.228
slr1794 Reverse -150 -169 5.89931 0.224
slr1800 Reverse -245 -264 2.3594 0.266
sll1655 Forward -370 -351 7.27595 0.204
slr1290 Reverse -339 -358 11.6025 0.129
slr1303 Reverse -29 -48 5.211 0.224
slr0964 Forward -143 -124 5.80098 0.224
slr0969 Forward -373 -354 3.73603 0.255
slr1619 Forward -235 -216 2.65439 0.265
slr1087 Forward -379 -360 2.65439 0.265
sll0649 Forward -391 -372 2.16274 0.273
sll0647 Reverse -25 -44 2.75272 0.265
slr0688 Forward -273 -254 16.8141 0.0487
slr0688 Reverse -210 -229 2.45773 0.266
smr0005 Reverse -58 -77 5.01433 0.224
slr1601 Reverse -293 -312 5.01433 0.224
slr1042 Reverse -279 -298 4.03102 0.245
slr1046 Reverse -100 -119 7.07928 0.204
slr1056 Forward -200 -181 1.76941 0.285
sml0005 Forward -113 -94 7.86593 0.204
sml0005 Reverse -221 -240 1.86774 0.282
slr2041 Reverse -231 -250 6.29264 0.224
slr2045 Reverse -269 -288 8.35759 0.202
slr1911 Forward -138 -119 2.55606 0.266
sll0994 Forward -275 -256 8.45592 0.202
sll0983 Forward -259 -240 4.71934 0.224
sll0981 Reverse -330 -349 2.65439 0.265
slr1039 Forward -274 -255 6.58763 0.223
slr1376 Reverse -86 -105 5.70265 0.224
slr1391 Forward -264 -245 10.8159 0.141
slr1134 Forward -308 -289 7.37428 0.204
slr1137 Reverse -197 -216 6.19431 0.224
sll1081 Forward -335 -316 2.45773 0.266
slr1148 Forward -364 -345 6.98095 0.204
ssl3441 Forward -59 -40 3.04771 0.264
sll1808 Reverse -332 -351 3.44104 0.261
sll1791 Reverse -273 -292 6.29264 0.224
slr1194 Reverse -241 -260 4.916 0.224
slr1202 Forward -395 -376 4.62101 0.224
slr1202 Reverse -80 -99 3.44104 0.261
sll1969 Forward -174 -155 7.57094 0.204
slr1827 Forward -119 -100 1.27776 0.296
slr1538 Reverse -331 -350 5.01433 0.224
slr1542 Forward -241 -222 16.4207 0.0487
sll1461 Reverse -344 -363 7.27595 0.204
slr1449 Reverse -83 -102 2.75272 0.265
sll1350 Reverse -295 -314 9.53756 0.178
slr1366 Forward -341 -322 4.52268 0.224
slr0875 Forward -282 -263 2.65439 0.265
sll0875 Reverse -342 -361 8.25926 0.202
ssr1480 Forward -347 -328 10.9142 0.141
sll0860 Forward -234 -215 5.211 0.224
ssl2595 Forward -352 -333 4.22769 0.235
sll1772 Forward -98 -79 5.89931 0.224
sll1771 Forward -148 -129 4.916 0.224
slr1876 Forward -131 -112 9.73422 0.178
sll1765 Forward -140 -121 25.9588 0.00681
sll1765 Forward -113 -94 23.8939 0.011
sll1765 Forward -293 -274 22.7139 0.0126
sll1765 Forward -191 -172 21.7306 0.014
sll1765 Forward -242 -223 16.6174 0.0487
sll1764 Forward -96 -77 20.944 0.015
sll1764 Forward -177 -158 19.5673 0.0207
sll1764 Forward -228 -209 12.3892 0.123
sll1764 Forward -129 -110 10.9142 0.141
sll1764 Forward -204 -185 4.52268 0.224
sll2012 Reverse -118 -137 9.93088 0.175
sll2011 Forward -400 -381 5.80098 0.224
sml0007 Reverse -298 -317 5.30933 0.224
sll1697 Reverse -1 -20 2.75272 0.265
slr1811 Forward -123 -104 2.75272 0.265
sll1631 Forward -168 -149 3.83436 0.252
slr0851 Reverse -349 -368 1.47442 0.292
sll0844 Forward -246 -227 5.01433 0.224
sll0839 Reverse -343 -362 1.37609 0.292
slr2058 Forward -281 -262 3.04771 0.264
slr2059 Reverse -147 -166 5.40766 0.224
slr1723 Reverse -22 -41 15.5357 0.0575
sll0253 Forward -212 -193 3.14605 0.263
sll0238 Forward -204 -185 2.3594 0.266
slr2098 Forward -390 -371 5.80098 0.224
sll1973 Reverse -333 -352 5.80098 0.224
slr1518 Reverse -164 -183 11.7992 0.128
sll1994 Forward -393 -374 1.57275 0.292
sll1994a Forward -64 -45 1.57275 0.292
slr2130 Reverse -18 -37 1.57275 0.292
sll1237 Forward -270 -251 3.14605 0.263
sll1218 Reverse -121 -140 2.65439 0.265
sll0802 Forward -132 -113 1.76941 0.285
slr1347 Reverse -337 -356 7.27595 0.204
ssl3573 Forward -140 -121 4.81767 0.224
sll1875 Forward -84 -65 3.73603 0.255
sll1097 Reverse -115 -134 5.40766 0.224
slr1673 Forward -226 -207 2.3594 0.266
slr1639 Reverse -330 -349 9.3409 0.178
sll1528 Forward -168 -149 1.47442 0.292
slr0287 Reverse -92 -111 4.916 0.224
slr0151 Forward -374 -355 16.0274 0.0519
sll0135 Reverse -41 -60 4.81767 0.224
slr0990 Reverse -53 -72 2.3594 0.266
slr0325 Reverse -342 -361 6.19431 0.224
sll0167 Reverse -187 -206 1.57275 0.292
slr0366 Reverse -264 -283 4.52268 0.224
sll0335 Reverse -15 -34 4.52268 0.224
slr0373 Forward -265 -246 4.52268 0.224
slr0374 Forward -151 -132 2.16274 0.273
sll0750 Reverse -374 -393 7.17762 0.204
slr0358 Forward -241 -222 3.44104 0.261
slr0001 Reverse -294 -313 7.7676 0.204
slr0017 Reverse -306 -325 1.86774 0.282
sll0413 Reverse -254 -273 9.3409 0.178
slr0054 Reverse -131 -150 1.37609 0.292
sll0063 Reverse -31 -50 1.86774 0.282
slr0064 Reverse -327 -346 4.12936 0.24
sll0686 Reverse -304 -323 2.85105 0.265
sll0602 Forward -256 -237 2.45773 0.266
slr0418 Forward -310 -291 2.85105 0.265
slr0194 Reverse -322 -341 13.0775 0.115
ssl0352 Reverse -367 -386 9.14423 0.182
sll0181 Reverse -176 -195 5.60432 0.224
ssl0331 Reverse -305 -324 3.93269 0.249
sgl0001 Forward -356 -337 5.11266 0.224
slr0088 Forward -233 -214 7.07928 0.204
sll0479 Forward -296 -277 8.55425 0.202
sll0474 Forward -360 -341 5.01433 0.224
ssr1038 Reverse -303 -322 3.34271 0.261
slr0619 Reverse -364 -383 7.37428 0.204
sll0108 Forward -44 -25 5.01433 0.224
slr0106 Reverse -280 -299 2.85105 0.265
sll0094 Forward -222 -203 5.89931 0.224
slr0304 Forward -73 -54 2.75272 0.265
slr0314 Reverse -325 -344 2.3594 0.266
slr0787 Reverse -83 -102 3.24438 0.262
sll0658 Forward -312 -293 4.916 0.224
ssl1255 Forward -46 -27 4.916 0.224
sll0034 Reverse -221 -240 4.916 0.224
sll0030 Forward -300 -281 3.14605 0.263
sll0900 Forward -130 -111 8.94757 0.186
slr0550 Forward -264 -245 6.98095 0.204
sll0529 Reverse -253 -272 2.45773 0.266
sll0522 Forward -124 -105 1.47442 0.292
slr1455 Forward -351 -332 3.6377 0.257
slr1575 Forward -394 -375 3.6377 0.257
sll1484 Reverse -208 -227 5.60432 0.224
sll1484 Reverse -112 -131 4.916 0.224
slr1189 Reverse -25 -44 14.3558 0.0778
sll0578 Forward -319 -300 4.81767 0.224
ssl5015 Forward -244 -225 2.0644 0.275
ssl5100 Reverse -112 -131 12.0942 0.123
slr5101 Forward -109 -90 12.0942 0.123
ssl7004 Reverse -233 -252 2.16274 0.273
slr7005 Forward -134 -115 2.16274 0.273
ssl7039 Reverse -204 -223 3.24438 0.262
slr7041 Forward -156 -137 3.24438 0.262
ssl7045 Reverse -168 -187 14.3558 0.0778
slr6007 Forward -231 -212 7.57094 0.204
sll6010 Reverse -311 -330 3.34271 0.261
slr6066 Forward -231 -212 7.57094 0.204
sll6069 Reverse -311 -330 3.34271 0.261
sll6098 Forward -301 -282 4.22769 0.235
slr6100 Reverse -176 -195 4.22769 0.235
6803t01 Reverse -259 -278 12.1925 0.123
6803t41 Reverse -254 -273 6.68596 0.22
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.364  0.000  0.636  0.000  
0.364 0.000 0.636 0.000
0.000 0.455 0.000 0.545
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.364 0.182 0.455
0.000 0.091 0.909 0.000
0.000 0.000 1.000 0.000
0.273 0.636 0.000 0.091
0.000 0.000 1.000 0.000
0.000 0.091 0.909 0.000
0.273 0.455 0.182 0.091
0.000 0.000 0.000 1.000
0.000 0.000 0.091 0.909
0.000 0.545 0.091 0.364
0.000 0.000 0.818 0.182
0.091 0.182 0.182 0.545
0.000 0.636 0.182 0.182
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000