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Details for NP_440937.1_5

Name NP_440937.1_5
Length 20
Regular expression T[GA][CT][TC]G[CT][GT][AG][CG][TC][AC]TTGG[CG][GT][TG]AG
Central No

Motif logo

Genes containing this motif

217 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -108 -127 12.1925 0.275
slr1312 Reverse -249 -268 10.2259 0.275
sll1205 Reverse -162 -181 10.9142 0.275
sll0712 Reverse -133 -152 9.14423 0.275
slr0724 Reverse -287 -306 11.7008 0.275
sll0217 Reverse -250 -269 9.24257 0.275
slr0257 Forward -131 -112 9.24257 0.275
sll1325 Forward -360 -341 8.55425 0.281
sll1324 Reverse -153 -172 8.75091 0.278
sll1323 Forward -330 -311 18.3873 0.249
sll1323 Forward -324 -305 11.2092 0.275
sll1040 Reverse -349 -368 12.0942 0.275
sll1036 Forward -42 -23 12.0942 0.275
sll1686 Reverse -178 -197 9.24257 0.275
ssr2972 Forward -387 -368 9.24257 0.275
sll1680 Forward -254 -235 8.45592 0.286
sll1672 Forward -263 -244 10.2259 0.275
sll1656 Forward -355 -336 10.0292 0.275
sll1656 Forward -400 -381 9.14423 0.275
sll1194 Reverse -227 -246 11.6025 0.275
slr1307 Forward -391 -372 7.7676 0.29
sll0936 Reverse -77 -96 8.75091 0.278
slr0983 Forward -276 -257 10.2259 0.275
slr1619 Reverse -365 -384 7.96426 0.287
slr1073 Reverse -370 -389 8.25926 0.287
ssr1765 Forward -244 -225 17.404 0.249
sll1022 Reverse -362 -381 11.5042 0.275
sll0635 Reverse -248 -267 7.57094 0.295
slr1591 Reverse -379 -398 9.63589 0.275
ssl2920 Forward -310 -291 8.35759 0.287
slr1609 Reverse -319 -338 9.73422 0.275
slr1056 Forward -197 -178 12.0942 0.275
sll1004 Forward -205 -186 17.3057 0.249
sll1750 Reverse -247 -266 10.0292 0.275
slr2032 Reverse -168 -187 9.53756 0.275
slr2032 Reverse -174 -193 9.3409 0.275
slr1909 Reverse -314 -333 14.9458 0.275
slr1909 Reverse -236 -255 10.0292 0.275
slr1913 Forward -76 -57 7.66927 0.294
sll1831 Forward -73 -54 8.06259 0.287
sll0998 Reverse -321 -340 8.06259 0.287
slr1019 Reverse -206 -225 12.8808 0.275
slr1019 Forward -300 -281 8.06259 0.287
sll0996 Reverse -130 -149 7.57094 0.295
ssr2333 Reverse -153 -172 13.2741 0.275
slr1394 Reverse -71 -90 9.83255 0.275
sll1583 Forward -45 -26 10.3242 0.275
sll1579 Forward -271 -252 8.84924 0.278
slr1704 Reverse -17 -36 8.84924 0.278
slr2006 Forward -332 -313 12.1925 0.275
sll1920 Reverse -227 -246 12.6841 0.275
slr2025 Forward -223 -204 7.86593 0.287
ssl3445 Forward -215 -196 9.14423 0.275
ssl3445 Reverse -313 -332 7.96426 0.287
sll1806 Forward -219 -200 10.0292 0.275
ssr2016 Forward -366 -347 7.57094 0.295
slr1208 Reverse -14 -33 11.7008 0.275
slr1214 Reverse -53 -72 8.94757 0.275
slr1216 Reverse -88 -107 9.3409 0.275
sll1969 Reverse -336 -355 7.96426 0.287
sll1969 Forward -364 -345 7.66927 0.294
sll1965 Forward -303 -284 12.8808 0.275
slr2076 Reverse -228 -247 12.8808 0.275
sll1744 Reverse -368 -387 10.1275 0.275
slr1826 Forward -282 -263 9.53756 0.275
sll1725 Reverse -139 -158 11.2092 0.275
slr1840 Forward -342 -323 9.73422 0.275
slr1542 Reverse -369 -388 12.0942 0.275
slr1544 Forward -133 -114 8.55425 0.281
sll1454 Reverse -215 -234 20.5506 0.249
slr1223 Reverse -91 -110 8.06259 0.287
sll1131 Reverse -348 -367 15.7324 0.249
sll1131 Reverse -202 -221 10.1275 0.275
slr1443 Reverse -230 -249 7.96426 0.287
sll1354 Reverse -315 -334 13.2741 0.275
sll1281 Reverse -254 -273 9.3409 0.275
ssl1633 Reverse -114 -133 12.6841 0.275
ssl1633 Reverse -271 -290 7.7676 0.29
slr1875 Forward -130 -111 8.45592 0.286
sll1767 Forward -49 -30 7.7676 0.29
slr1877 Reverse -256 -275 7.7676 0.29
sll1765 Reverse -290 -309 7.86593 0.287
sll2009 Reverse -61 -80 9.73422 0.275
sll2002 Reverse -366 -385 15.7324 0.249
slr1747 Reverse -132 -151 10.5209 0.275
slr0852 Reverse -126 -145 7.7676 0.29
slr0853 Reverse -43 -62 8.06259 0.287
sll0855 Reverse -9 -28 9.63589 0.275
sll0837 Reverse -302 -321 11.5042 0.275
sll0837 Reverse -289 -308 10.0292 0.275
slr1250 Forward -298 -279 9.24257 0.275
slr1253 Forward -190 -171 9.14423 0.275
slr1258 Forward -90 -71 12.0942 0.275
sll1959 Forward -77 -58 8.25926 0.287
ssr2912 Forward -281 -262 8.94757 0.275
sll0240 Reverse -333 -352 8.45592 0.286
slr2080 Reverse -5 -24 18.289 0.249
sll1982 Forward -101 -82 10.6192 0.275
slr2092 Reverse -162 -181 10.6192 0.275
sll1423 Forward -127 -108 7.86593 0.287
slr1506 Reverse -308 -327 7.86593 0.287
ssr2551 Forward -338 -319 7.86593 0.287
ssr2554 Forward -223 -204 9.63589 0.275
ssr2554 Reverse -29 -48 9.14423 0.275
slr1518 Reverse -316 -335 9.14423 0.275
slr2121 Forward -260 -241 8.25926 0.287
slr1331 Forward -87 -68 9.14423 0.275
slr0808 Forward -177 -158 16.1257 0.249
sll0817 Forward -364 -345 14.1591 0.275
slr0816 Forward -358 -339 10.4225 0.275
sll0810 Forward -69 -50 8.65258 0.278
sll1252 Reverse -294 -313 7.66927 0.294
sll1249 Forward -365 -346 10.6192 0.275
slr1351 Forward -373 -354 8.06259 0.287
sll1875 Reverse -290 -309 7.96426 0.287
sll1869 Forward -22 -3 9.14423 0.275
slr1984 Reverse -128 -147 9.14423 0.275
sll1868 Reverse -221 -240 10.2259 0.275
slr1472 Reverse -334 -353 8.94757 0.275
sll1384 Forward -320 -301 10.3242 0.275
slr1275 Forward -272 -253 8.25926 0.287
sll1101 Forward -117 -98 17.6007 0.249
slr1674 Forward -386 -367 14.6508 0.275
slr1687 Reverse -141 -160 9.3409 0.275
slr0935 Reverse -289 -308 9.0459 0.275
slr0940 Forward -293 -274 16.3224 0.249
slr0948 Forward -371 -352 7.57094 0.295
slr1634 Forward -26 -7 10.2259 0.275
sll1526 Forward -274 -255 8.94757 0.275
slr1641 Reverse -10 -29 8.94757 0.275
slr1646 Forward -379 -360 10.3242 0.275
slr1647 Forward -233 -214 12.5858 0.275
sll1522 Forward -379 -360 13.5691 0.275
sll0361 Forward -341 -322 13.1758 0.275
sll0361 Reverse -192 -211 10.3242 0.275
slr0151 Forward -389 -370 8.25926 0.287
sll0145 Reverse -178 -197 11.3075 0.275
slr0165 Reverse -103 -122 9.24257 0.275
slr1924 Reverse -309 -328 15.9291 0.249
slr1929 Forward -41 -22 16.0274 0.249
sll1848 Forward -79 -60 8.65258 0.278
slr1939 Reverse -206 -225 8.65258 0.278
slr1951 Reverse -333 -352 9.0459 0.275
slr0990 Forward -132 -113 7.66927 0.294
slr0320 Forward -377 -358 10.0292 0.275
slr0366 Reverse -290 -309 7.47261 0.299
sll0336 Reverse -152 -171 8.94757 0.275
sll0328 Forward -168 -149 9.63589 0.275
sll0328 Forward -369 -350 7.57094 0.295
slr0386 Reverse -366 -385 7.57094 0.295
slr0776 Forward -259 -240 8.55425 0.281
sll0762 Reverse -89 -108 13.4708 0.275
slr0782 Forward -147 -128 9.73422 0.275
slr0347 Reverse -177 -196 11.5042 0.275
sll0020 Reverse -82 -101 8.65258 0.278
slr0232 Reverse -116 -135 7.57094 0.295
ssl0769 Reverse -62 -81 8.65258 0.278
slr0050 Forward -102 -83 8.75091 0.278
sll0065 Reverse -156 -175 11.2092 0.275
ssr0109 Forward -26 -7 11.2092 0.275
slr0053 Forward -219 -200 11.2092 0.275
slr0630 Forward -105 -86 9.93088 0.275
sll0616 Forward -397 -378 9.63589 0.275
slr0637 Forward -97 -78 12.1925 0.275
sll0602 Reverse -244 -263 8.65258 0.278
sll0368 Reverse -193 -212 9.53756 0.275
slr0426 Forward -144 -125 9.53756 0.275
sll0183 Forward -85 -66 11.1109 0.275
slr0904 Forward -399 -380 8.16093 0.287
slr0915 Forward -201 -182 15.3391 0.255
slr0575 Forward -64 -45 7.47261 0.299
slr0580 Reverse -380 -399 8.25926 0.287
sll0833 Forward -31 -12 9.0459 0.275
sll0829 Reverse -59 -78 8.65258 0.278
slr0839 Forward -54 -35 8.65258 0.278
sll0821 Forward -138 -119 9.73422 0.275
slr0847 Reverse -311 -330 9.73422 0.275
slr0081 Reverse -269 -288 10.4225 0.275
slr0090 Forward -154 -135 12.6841 0.275
slr0498 Forward -124 -105 9.43923 0.275
sll0480 Reverse -94 -113 10.4225 0.275
slr0509 Forward -89 -70 10.4225 0.275
sll0107 Reverse -157 -176 8.06259 0.287
sll0289 Forward -362 -343 12.8808 0.275
sll0282 Forward -143 -124 9.14423 0.275
slr0313 Forward -264 -245 12.4875 0.275
slr0788 Forward -311 -292 9.93088 0.275
sll0787 Forward -220 -201 8.25926 0.287
slr0765 Reverse -180 -199 11.1109 0.275
sll0041 Forward -400 -381 12.2908 0.275
slr0531 Forward -309 -290 8.75091 0.278
sll0505 Reverse -15 -34 8.35759 0.287
slr0925 Reverse -292 -311 8.94757 0.275
slr0926 Forward -128 -109 8.16093 0.287
slr0930 Reverse -240 -259 8.06259 0.287
sll0897 Forward -161 -142 9.43923 0.275
sll0897 Forward -167 -148 9.14423 0.275
sll1344 Forward -274 -255 8.94757 0.275
slr1451 Forward -190 -171 7.47261 0.299
slr1459 Forward -357 -338 10.5209 0.275
slr0655 Forward -89 -70 7.47261 0.299
sll0623 Reverse -195 -214 12.8808 0.275
slr1556 Reverse -221 -240 9.0459 0.275
sll1485 Reverse -275 -294 10.9142 0.275
slr0752 Reverse -175 -194 11.8975 0.275
slr0752 Forward -187 -168 8.06259 0.287
sll0729 Forward -368 -349 11.7008 0.275
sll0449 Forward -225 -206 9.0459 0.275
sll0441 Reverse -203 -222 8.55425 0.281
sll0430 Reverse -228 -247 8.16093 0.287
slr1176 Forward -103 -84 8.16093 0.287
slr0589 Forward -60 -41 8.65258 0.278
slr0602 Forward -274 -255 16.8141 0.249
sll5035 Reverse -341 -360 7.96426 0.287
sll5042 Reverse -66 -85 14.2574 0.275
slr5058 Forward -352 -333 16.9124 0.249
sll5067 Reverse -309 -328 11.0125 0.275
ssl5113 Forward -144 -125 10.5209 0.275
slr5115 Reverse -350 -369 10.5209 0.275
ssr5117 Reverse -96 -115 7.86593 0.287
slr5118 Reverse -332 -351 7.86593 0.287
sll7064 Reverse -170 -189 11.0125 0.275
sll8002 Reverse -182 -201 7.96426 0.287
sll8006 Reverse -349 -368 9.73422 0.275
sll8007 Reverse -2 -21 9.73422 0.275
slr6015 Reverse -235 -254 13.3725 0.275
slr6074 Reverse -235 -254 13.3725 0.275
6803t09 Reverse -309 -328 9.53756 0.275
6803t10 Forward -160 -141 8.35759 0.287
6803t12 Reverse -32 -51 9.3409 0.275
6803t24 Forward -364 -345 9.93088 0.275
6803t34 Forward -146 -127 15.3391 0.255
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.083  0.000  0.083  0.833  
0.417 0.000 0.583 0.000
0.000 0.500 0.000 0.500
0.083 0.333 0.000 0.583
0.000 0.000 1.000 0.000
0.000 0.667 0.000 0.333
0.000 0.083 0.500 0.417
0.583 0.000 0.417 0.000
0.000 0.500 0.417 0.083
0.000 0.333 0.083 0.583
0.583 0.250 0.167 0.000
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.083 0.167 0.750 0.000
0.083 0.500 0.333 0.083
0.167 0.167 0.333 0.333
0.083 0.000 0.250 0.667
0.750 0.000 0.083 0.167
0.167 0.000 0.833 0.000