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Details for NP_440916.1_1

Name NP_440916.1_1
Length 15
Regular expression A[AT]A[AT]T[TC][TG][CT][CT]CCCAGC
Central Yes

Motif logo

Genes containing this motif

287 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0612 Forward -154 -140 12.586 0.206
slr0613 Forward -156 -142 12.291 0.206
sll1405 Reverse -228 -242 13.4709 0.206
sll1404 Forward -202 -188 9.34103 0.236
slr1484 Reverse -145 -159 9.34103 0.236
slr1113 Reverse -148 -162 16.9125 0.168
slr1115 Reverse -280 -294 8.06273 0.28
slr1118 Forward -80 -66 9.83269 0.226
sll1059 Reverse -141 -155 10.9143 0.206
slr1125 Reverse -346 -360 8.94771 0.257
slr0725 Reverse -223 -237 14.1593 0.206
slr0250 Forward -45 -31 11.406 0.206
slr1411 Forward -94 -80 10.6193 0.206
slr1416 Forward -325 -311 10.0294 0.216
slr1096 Reverse -304 -318 11.2093 0.206
sll1037 Forward -47 -33 8.35772 0.273
ssl2009 Forward -37 -23 8.45605 0.267
slr1774 Reverse -267 -281 7.9644 0.284
slr1778 Reverse -339 -353 12.586 0.206
slr1778 Reverse -45 -59 8.55439 0.267
sll1675 Reverse -196 -210 14.1593 0.206
slr1788 Forward -114 -100 10.3243 0.208
slr1800 Forward -159 -145 8.45605 0.267
sll1655 Forward -54 -40 10.521 0.206
sll1188 Reverse -1 -15 10.226 0.21
sll1187 Reverse -125 -139 7.9644 0.284
slr0964 Forward -293 -279 10.0294 0.216
slr0964 Forward -257 -243 8.06273 0.28
slr0974 Reverse -290 -304 9.2427 0.238
sll0922 Reverse -368 -382 14.6509 0.206
slr0977 Forward -366 -352 14.6509 0.206
slr1616 Reverse -225 -239 7.9644 0.284
slr1078 Reverse -137 -151 8.25939 0.273
sll1022 Forward -171 -157 11.0127 0.206
slr1400 Reverse -253 -267 11.2093 0.206
slr1600 Reverse -59 -73 8.25939 0.273
slr1046 Forward -239 -225 14.4542 0.206
sll1005 Forward -52 -38 17.2075 0.161
slr1761 Reverse -246 -260 12.1926 0.206
sll1643 Reverse -182 -196 10.3243 0.208
slr1762 Forward -62 -48 10.3243 0.208
slr1763 Forward -119 -105 9.73436 0.226
sll1638 Reverse -46 -60 9.34103 0.236
slr1768 Forward -316 -302 9.34103 0.236
slr1910 Forward -296 -282 8.35772 0.273
slr1914 Reverse -286 -300 9.93102 0.224
slr1919 Reverse -301 -315 9.04604 0.249
ssr1698 Reverse -73 -87 11.5043 0.206
sll0981 Reverse -81 -95 12.291 0.206
slr1376 Reverse -377 -391 9.2427 0.238
slr1383 Reverse -31 -45 7.9644 0.284
sll1297 Forward -206 -192 9.14437 0.238
slr1393 Reverse -217 -231 9.2427 0.238
sll1285 Forward -236 -222 16.6175 0.177
slr2005 Forward -124 -110 10.7177 0.206
sll1924 Reverse -24 -38 10.226 0.21
sll1916 Forward -308 -294 8.94771 0.257
sll1915 Forward -310 -296 12.1926 0.206
sll1915 Reverse -196 -210 7.66941 0.3
sll1077 Forward -219 -205 8.25939 0.273
slr1142 Reverse -218 -232 8.25939 0.273
ssl3451 Reverse -259 -273 9.04604 0.249
sll1821 Forward -129 -115 11.5043 0.206
sll1815 Reverse -304 -318 20.7474 0.0296
ssl3437 Forward -394 -380 7.66941 0.3
ssl3436 Forward -165 -151 7.66941 0.3
slr1901 Reverse -105 -119 9.5377 0.236
slr1194 Forward -256 -242 11.111 0.206
slr1204 Forward -23 -9 8.06273 0.28
sll1968 Reverse -145 -159 10.521 0.206
slr1835 Forward -180 -166 8.55439 0.267
sll1721 Forward -19 -5 11.0127 0.206
slr1838 Reverse -359 -373 11.0127 0.206
slr1538 Forward -398 -384 8.25939 0.273
slr1541 Forward -264 -250 10.3243 0.208
sll1466 Forward -341 -327 7.76774 0.291
ssl2823 Forward -107 -93 7.76774 0.291
sll1633 Forward -16 -2 10.521 0.206
slr1223 Reverse -303 -317 13.6676 0.206
slr1228 Forward -17 -3 8.35772 0.273
ssr2049 Reverse -171 -185 20.3541 0.0296
sll1131 Reverse -86 -100 20.4524 0.0296
slr1237 Forward -89 -75 20.4524 0.0296
slr1437 Reverse -176 -190 11.3077 0.206
slr1437 Reverse -110 -124 9.34103 0.236
slr1437 Reverse -83 -97 8.55439 0.267
slr1440 Reverse -193 -207 10.521 0.206
slr1444 Forward -121 -107 11.8976 0.206
slr1450 Forward -210 -196 9.43936 0.236
sll1276 Forward -86 -72 10.9143 0.206
slr0876 Forward -352 -338 20.3541 0.0296
slr0882 Forward -171 -157 11.8976 0.206
sll0868 Reverse -87 -101 13.0776 0.206
sll1315 Forward -185 -171 9.43936 0.236
sll1314 Forward -294 -280 9.73436 0.226
slr1403 Reverse -90 -104 9.73436 0.226
sll1785 Reverse -196 -210 9.34103 0.236
sll1783 Forward -203 -189 7.66941 0.3
slr1852 Reverse -281 -295 7.66941 0.3
slr1854 Reverse -24 -38 8.35772 0.273
slr1866 Reverse -100 -114 8.65272 0.267
sll1774 Reverse -281 -295 10.9143 0.206
slr1875 Reverse -153 -167 11.0127 0.206
slr1882 Reverse -174 -188 8.25939 0.273
sll1757 Reverse -176 -190 8.55439 0.267
sll2002 Reverse -239 -253 9.63603 0.235
sll1708 Forward -391 -377 7.76774 0.291
sll1703 Forward -139 -125 9.34103 0.236
sll1697 Forward -94 -80 10.7177 0.206
slr1811 Reverse -30 -44 10.7177 0.206
slr1814 Forward -187 -173 11.3077 0.206
sll1696 Forward -378 -364 8.65272 0.267
sll1692 Reverse -323 -337 13.2743 0.206
slr1819 Forward -172 -158 13.2743 0.206
sll0847 Forward -278 -264 8.55439 0.267
sll0839 Reverse -60 -74 13.5693 0.206
sll0837 Reverse -224 -238 13.5693 0.206
sll1161 Forward -394 -380 9.34103 0.236
slr1256 Forward -259 -245 9.43936 0.236
slr2058 Reverse -362 -376 13.4709 0.206
slr2067 Reverse -375 -389 7.66941 0.3
sll1909 Forward -256 -242 10.0294 0.216
slr1999 Reverse -352 -366 9.34103 0.236
slr2000 Forward -20 -6 7.9644 0.284
slr0265 Reverse -376 -390 9.34103 0.236
sll0238 Forward -301 -287 8.65272 0.267
sll0238 Forward -188 -174 8.55439 0.267
slr2082 Reverse -143 -157 8.65272 0.267
slr2084 Reverse -297 -311 10.226 0.21
sll1987 Forward -358 -344 20.0591 0.036
sll1973 Forward -19 -5 10.226 0.21
slr2105 Reverse -154 -168 10.226 0.21
sll1415 Reverse -383 -397 9.73436 0.226
slr2122 Reverse -222 -236 8.06273 0.28
ssr2194 Reverse -194 -208 8.65272 0.267
sll1233 Forward -175 -161 9.73436 0.226
sll1229 Forward -102 -88 9.04604 0.249
sll1222 Forward -259 -245 15.6342 0.206
sll1263 Forward -200 -186 7.76774 0.291
sll1244 Forward -114 -100 10.3243 0.208
slr1353 Reverse -68 -82 10.3243 0.208
sll1894 Forward -154 -140 8.45605 0.267
slr1966 Reverse -79 -93 8.45605 0.267
sll1893 Reverse -161 -175 10.6193 0.206
sll1883 Forward -47 -33 8.06273 0.28
sll1876 Forward -90 -76 12.291 0.206
sll1875 Forward -256 -242 13.4709 0.206
sll1873 Reverse -161 -175 11.7993 0.206
ssl2717 Reverse -197 -211 13.5693 0.206
sll1387 Forward -32 -18 12.0943 0.206
sll1373 Reverse -164 -178 7.76774 0.291
slr1274 Forward -71 -57 7.9644 0.284
sll1169 Forward -131 -117 10.3243 0.208
sll1443 Reverse -199 -213 8.55439 0.267
slr1166 Reverse -44 -58 8.35772 0.273
slr1173 Reverse -340 -354 11.2093 0.206
slr1675 Forward -324 -310 9.73436 0.226
ssr2799 Forward -295 -281 11.2093 0.206
ssl3044 Forward -75 -61 10.9143 0.206
slr1687 Reverse -70 -84 10.9143 0.206
slr1687 Reverse -320 -334 9.5377 0.236
slr1691 Reverse -209 -223 8.06273 0.28
slr1697 Reverse -325 -339 7.76774 0.291
slr0938 Forward -325 -311 9.93102 0.224
sll1540 Forward -251 -237 8.65272 0.267
slr1622 Forward -371 -357 14.0609 0.206
sll1537 Forward -16 -2 18.7808 0.0753
sll1535 Reverse -232 -246 9.34103 0.236
slr1645 Reverse -373 -387 21.3374 0.0246
slr1645 Forward -364 -350 10.521 0.206
ssr0756 Forward -34 -20 8.06273 0.28
sll0426 Reverse -173 -187 8.06273 0.28
slr0444 Forward -15 -1 8.06273 0.28
sll0422 Reverse -247 -261 11.2093 0.206
sll0260 Forward -43 -29 11.996 0.206
ssr0482 Reverse -247 -261 11.996 0.206
sll0149 Forward -224 -210 9.63603 0.235
slr0157 Reverse -148 -162 10.6193 0.206
slr1924 Forward -45 -31 12.4876 0.206
sll1854 Reverse -141 -155 13.1759 0.206
slr1946 Forward -226 -212 10.816 0.206
slr0320 Forward -168 -154 10.3243 0.208
sll0301 Reverse -27 -41 21.7307 0.0228
ssl0312 Reverse -122 -136 11.8976 0.206
sll0157 Forward -318 -304 10.521 0.206
sll0350 Forward -160 -146 8.55439 0.267
slr0363 Reverse -301 -315 8.55439 0.267
slr0369 Reverse -64 -78 8.65272 0.267
slr0380 Forward -256 -242 12.4876 0.206
sll0330 Forward -77 -63 10.521 0.206
sll0330 Forward -249 -235 8.94771 0.257
slr0383 Reverse -374 -388 8.94771 0.257
sll0772 Reverse -303 -317 14.0609 0.206
sll0766 Reverse -159 -173 10.9143 0.206
slr0783 Reverse -298 -312 8.35772 0.273
sll0017 Forward -355 -341 12.0943 0.206
slr0009 Forward -187 -173 8.35772 0.273
slr0012 Reverse -7 -21 8.25939 0.273
sll0012 Forward -145 -131 9.2427 0.238
slr0016 Forward -37 -23 11.7993 0.206
slr0222 Reverse -237 -251 8.06273 0.28
sll0200 Forward -97 -83 10.4227 0.206
sll0195 Reverse -154 -168 14.4542 0.206
sll0414 Reverse -4 -18 10.7177 0.206
slr0431 Forward -207 -193 10.7177 0.206
slr0438 Reverse -188 -202 12.8809 0.206
slr0468 Reverse -362 -376 12.4876 0.206
slr0480 Reverse -345 -359 21.3374 0.0246
slr0480 Forward -336 -322 11.2093 0.206
sll0687 Reverse -32 -46 11.5043 0.206
sll0613 Forward -193 -179 7.76774 0.291
slr0633 Reverse -9 -23 7.76774 0.291
slr0635 Reverse -145 -159 10.521 0.206
slr0640 Forward -285 -271 9.5377 0.236
slr0650 Forward -203 -189 11.2093 0.206
sll0396 Reverse -122 -136 9.34103 0.236
sll0381 Forward -261 -247 9.63603 0.235
ssr0692 Reverse -214 -228 9.63603 0.235
sll0370 Reverse -123 -137 9.5377 0.236
slr0427 Forward -73 -59 10.226 0.21
sll0188 Forward -292 -278 18.6825 0.0753
sll0178 Forward -23 -9 9.2427 0.238
slr0898 Reverse -285 -299 10.4227 0.206
slr0898 Reverse -214 -228 8.06273 0.28
slr0903 Reverse -3 -17 12.586 0.206
slr0909 Forward -285 -271 9.2427 0.238
sll0545 Reverse -240 -254 9.93102 0.224
slr0581 Reverse -286 -300 20.7474 0.0296
slr0825 Reverse -257 -271 12.7826 0.206
sll0834 Reverse -246 -260 20.3541 0.0296
sll0833 Forward -221 -207 16.2242 0.189
slr0838 Forward -346 -332 8.06273 0.28
slr0839 Forward -368 -354 9.34103 0.236
sll0084 Forward -301 -287 8.65272 0.267
sll0083 Forward -176 -162 12.7826 0.206
slr0078 Reverse -41 -55 12.7826 0.206
slr0086 Reverse -286 -300 8.45605 0.267
sll0485 Forward -371 -357 8.45605 0.267
slr0510 Reverse -2 -16 8.65272 0.267
sll0469 Reverse -176 -190 11.3077 0.206
slr0619 Forward -51 -37 10.1277 0.211
slr0303 Reverse -135 -149 12.291 0.206
sll0792 Forward -32 -18 13.1759 0.206
slr0798 Reverse -120 -134 13.1759 0.206
sll0784 Reverse -291 -305 8.94771 0.257
sll0780 Forward -329 -315 8.35772 0.273
sll0745 Forward -218 -204 7.9644 0.284
sll0744 Reverse -332 -346 7.66941 0.3
sll0738 Forward -143 -129 10.9143 0.206
sll0026 Forward -129 -115 11.111 0.206
slr0542 Forward -340 -326 10.226 0.21
sll0896 Reverse -149 -163 12.3893 0.206
sll0895 Forward -279 -265 16.5192 0.178
slr0546 Reverse -154 -168 16.5192 0.178
sll0528 Reverse -130 -144 12.586 0.206
sll0522 Reverse -246 -260 12.4876 0.206
sll1334 Reverse -385 -399 8.55439 0.267
slr1453 Forward -285 -271 11.2093 0.206
sll0631 Reverse -312 -326 22.0257 0.0228
sll1495 Forward -153 -139 8.65272 0.267
slr1559 Reverse -127 -141 8.65272 0.267
sll0736 Forward -46 -32 10.0294 0.216
slr0751 Forward -222 -208 8.45605 0.267
sll0732 Forward -399 -385 22.0257 0.0228
slr0753 Reverse -151 -165 22.0257 0.0228
ssl1378 Reverse -356 -370 9.63603 0.235
slr0757 Reverse -185 -199 9.2427 0.238
slr1657 Forward -318 -304 11.3077 0.206
slr1659 Forward -313 -299 10.9143 0.206
sll1546 Reverse -231 -245 9.93102 0.224
slr1661 Forward -259 -245 9.93102 0.224
sll0577 Forward -97 -83 9.14437 0.238
slr0588 Reverse -99 -113 9.14437 0.238
slr0594 Forward -227 -213 8.25939 0.273
sll0567 Reverse -159 -173 10.521 0.206
slr0601 Reverse -313 -327 8.65272 0.267
slr5021 Forward -155 -141 19.3708 0.0553
sll5032 Forward -126 -112 8.65272 0.267
sll5044 Forward -233 -219 8.25939 0.273
ssl5045 Forward -24 -10 8.25939 0.273
sll5050 Reverse -177 -191 9.63603 0.235
ssl5065 Reverse -380 -394 10.6193 0.206
slr5116 Forward -80 -66 8.06273 0.28
sll7028 Forward -369 -355 11.6026 0.206
ssl7038 Reverse -93 -107 7.9644 0.284
ssr7040 Forward -326 -312 7.9644 0.284
sll7043 Reverse -35 -49 13.0776 0.206
sll7067 Reverse -53 -67 8.35772 0.273
slr7068 Forward -274 -260 8.35772 0.273
slr7100 Forward -196 -182 8.94771 0.257
sll8025 Forward -303 -289 7.76774 0.291
slr6009 Reverse -202 -216 9.34103 0.236
slr6029 Forward -363 -349 11.3077 0.206
slr6068 Reverse -202 -216 9.34103 0.236
slr6088 Forward -363 -349 11.3077 0.206
slr6096 Reverse -365 -379 11.0127 0.206
6803t10 Forward -59 -45 10.7177 0.206
6803t21 Reverse -300 -314 10.0294 0.216
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.833  0.000  0.000  0.167  
0.667 0.000 0.000 0.333
1.000 0.000 0.000 0.000
0.500 0.167 0.000 0.333
0.000 0.000 0.167 0.833
0.000 0.333 0.000 0.667
0.167 0.000 0.333 0.500
0.000 0.500 0.000 0.500
0.000 0.667 0.000 0.333
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.833 0.167 0.000
0.833 0.000 0.000 0.167
0.000 0.000 1.000 0.000
0.167 0.833 0.000 0.000