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Details for NP_440855.1_5

Name NP_440855.1_5
Length 20
Regular expression [CA]TGGC[CG][CT][TC][GC]GC[GC][GA]C[ACG]GC[CA][CA]A
Central Yes

Motif logo

Genes containing this motif

285 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1212 Reverse -349 -368 1.57197 0.3
slr1311 Forward -258 -239 1.57197 0.3
slr1319 Reverse -348 -367 3.04693 0.287
slr1492 Forward -364 -345 6.68515 0.285
slr1117 Reverse -326 -345 2.26028 0.295
slr1122 Reverse -239 -258 2.85027 0.288
sll1054 Reverse -158 -177 3.53858 0.287
sll1052 Reverse -372 -391 3.34192 0.287
sll1052 Reverse -379 -398 2.55527 0.288
sll1049 Reverse -321 -340 12.88 0.161
sll0709 Reverse -291 -310 2.75194 0.288
sll0708 Forward -296 -277 4.42355 0.285
sll0703 Forward -298 -279 5.89851 0.285
slr0741 Reverse -206 -225 8.35677 0.285
slr0252 Reverse -280 -299 3.14526 0.287
ssl0410 Forward -69 -50 1.96529 0.295
sll1324 Reverse -285 -304 1.6703 0.295
sll1321 Reverse -156 -175 12.9783 0.161
slr1413 Forward -43 -24 12.9783 0.161
slr1413 Forward -217 -198 4.42355 0.285
slr1416 Forward -192 -173 5.2102 0.285
slr1093 Reverse -308 -327 1.76863 0.295
slr1096 Reverse -57 -76 5.99684 0.285
slr1100 Reverse -370 -389 3.53858 0.287
sll1037 Forward -303 -284 3.73524 0.287
sll1030 Reverse -301 -320 4.03023 0.287
sll1682 Reverse -366 -385 7.07848 0.285
sll1676 Reverse -222 -241 4.32522 0.285
slr1787 Forward -378 -359 4.32522 0.285
sll1671 Forward -292 -273 5.11187 0.285
slr1790 Reverse -50 -69 5.11187 0.285
sll1669 Reverse -241 -260 4.91521 0.285
slr1793 Forward -355 -336 8.65176 0.285
sll1667 Reverse -136 -155 6.39016 0.285
sll1655 Reverse -224 -243 6.1935 0.285
slr1290 Reverse -37 -56 1.76863 0.295
sll1186 Reverse -314 -333 5.11187 0.285
slr0963 Reverse -233 -252 5.89851 0.285
sll0939 Forward -262 -243 3.63691 0.287
sll0932 Reverse -285 -304 2.35861 0.295
slr0977 Reverse -231 -250 1.6703 0.295
slr0981 Reverse -156 -175 6.58682 0.285
sll0647 Forward -45 -26 8.55343 0.285
slr0692 Reverse -304 -323 13.9616 0.141
slr1594 Reverse -241 -260 4.52188 0.285
sll1507 Forward -68 -49 7.4718 0.285
ssr2711 Reverse -167 -186 4.22689 0.285
sll1501 Reverse -109 -128 6.78348 0.285
slr1052 Reverse -313 -332 3.83357 0.287
sll1001 Reverse -69 -88 2.9486 0.288
slr1846 Forward -261 -242 2.16195 0.295
sll1942 Forward -104 -85 3.63691 0.287
slr2051 Forward -221 -202 1.6703 0.295
slr1911 Reverse -350 -369 6.39016 0.285
sll1837 Reverse -53 -72 17.7965 0.085
slr1912 Forward -212 -193 17.7965 0.085
sll0995 Reverse -117 -136 5.80018 0.285
sll0994 Reverse -357 -376 18.7798 0.085
sll0994 Forward -376 -357 2.45694 0.291
slr1023 Forward -240 -221 6.39016 0.285
sll0992 Reverse -159 -178 3.73524 0.287
slr1033 Reverse -230 -249 3.04693 0.287
sll0983 Forward -98 -79 2.26028 0.295
sll0981 Forward -247 -228 3.9319 0.287
slr1039 Reverse -204 -223 5.40686 0.285
ssr2315 Forward -357 -338 2.06362 0.295
slr1395 Forward -327 -308 1.6703 0.295
sll1285 Reverse -272 -291 3.34192 0.287
sll1284 Forward -254 -235 5.50519 0.285
sll1583 Forward -358 -339 2.55527 0.288
sll1574 Reverse -191 -210 6.48849 0.285
slr1710 Reverse -369 -388 1.76863 0.295
sll1915 Forward -86 -67 7.07848 0.285
sll1915 Reverse -207 -226 3.24359 0.287
sll1915 Reverse -71 -90 1.96529 0.295
slr2026 Reverse -84 -103 7.07848 0.285
slr2026 Forward -99 -80 1.96529 0.295
ssl3615 Forward -319 -300 1.76863 0.295
slr1134 Forward -46 -27 5.2102 0.285
sll1076 Forward -226 -207 7.86512 0.285
sll1812 Reverse -134 -153 9.93006 0.285
sll1804 Forward -224 -205 3.34192 0.287
sll1797 Forward -293 -274 5.70185 0.285
sll1796 Forward -135 -116 2.6536 0.288
slr1897 Reverse -46 -65 2.6536 0.288
sll1786 Reverse -299 -318 4.32522 0.285
sll1120 Forward -57 -38 1.96529 0.295
slr1195 Reverse -365 -384 3.73524 0.287
slr1200 Forward -287 -268 4.32522 0.285
slr1215 Forward -350 -331 5.50519 0.285
sll1969 Forward -110 -91 3.34192 0.287
sll1965 Forward -293 -274 4.12856 0.285
slr2076 Reverse -238 -257 4.12856 0.285
sll1738 Forward -51 -32 2.26028 0.295
slr1835 Forward -175 -156 7.07848 0.285
sll1726 Reverse -289 -308 8.35677 0.285
slr1841 Forward -291 -272 3.53858 0.287
sll1713 Forward -118 -99 3.24359 0.287
sll1143 Forward -385 -366 3.04693 0.287
slr1223 Reverse -379 -398 3.04693 0.287
sll1127 Reverse -309 -328 6.09517 0.285
sll1127 Forward -372 -353 1.86696 0.295
slr1435 Reverse -294 -313 2.9486 0.288
slr1440 Reverse -379 -398 6.78348 0.285
slr1443 Reverse -199 -218 10.2251 0.282
slr1444 Forward -394 -375 3.34192 0.287
sll1348 Reverse -332 -351 1.76863 0.295
sll1270 Forward -174 -155 2.85027 0.288
sll0876 Reverse -46 -65 4.42355 0.285
slr0878 Forward -142 -123 2.45694 0.291
slr0883 Reverse -346 -365 3.04693 0.287
sll0863 Reverse -102 -121 2.9486 0.288
sll1775 Forward -317 -298 9.14342 0.285
sll1774 Reverse -237 -256 18.1898 0.085
sll1769 Reverse -203 -222 4.12856 0.285
slr1875 Forward -109 -90 4.71854 0.285
ssl3379 Forward -280 -261 4.52188 0.285
sll1766 Reverse -350 -369 4.52188 0.285
slr1879 Reverse -140 -159 4.71854 0.285
ssl3364 Reverse -135 -154 5.80018 0.285
slr1884 Forward -150 -131 5.80018 0.285
sll2014 Reverse -218 -237 5.01354 0.285
slr2135 Forward -319 -300 7.66846 0.285
ssl3829 Reverse -162 -181 2.55527 0.288
slr2141 Forward -276 -257 2.55527 0.288
ssl3291 Forward -349 -330 11.2084 0.238
sll1688 Forward -152 -133 2.55527 0.288
slr1820 Reverse -223 -242 2.55527 0.288
sll1624 Forward -311 -292 5.40686 0.285
slr1740 Reverse -236 -255 4.42355 0.285
slr1740 Reverse -138 -157 1.86696 0.295
slr1744 Forward -123 -104 5.70185 0.285
slr1746 Forward -194 -175 7.17681 0.285
slr1746 Reverse -175 -194 4.03023 0.287
sll0848 Reverse -107 -126 1.6703 0.295
slr1248 Forward -199 -180 1.6703 0.295
slr1249 Forward -349 -330 17.1082 0.085
slr1250 Reverse -274 -293 4.81688 0.285
sll1150 Forward -258 -239 3.73524 0.287
slr1259 Reverse -294 -313 14.9449 0.141
slr1263 Reverse -30 -49 1.86696 0.295
sll1959 Forward -165 -146 3.9319 0.287
slr1990 Forward -318 -299 11.7 0.213
slr1994 Reverse -214 -233 2.35861 0.295
slr2002 Reverse -278 -297 3.44025 0.287
sll1615 Reverse -349 -368 3.34192 0.287
sll1614 Reverse -135 -154 1.6703 0.295
sll1605 Forward -168 -149 7.76679 0.285
slr1718 Reverse -95 -114 7.76679 0.285
slr1719 Reverse -311 -330 9.83173 0.285
slr1720 Reverse -311 -330 4.42355 0.285
sll0245 Forward -348 -329 1.96529 0.295
slr0269 Forward -114 -95 6.39016 0.285
slr0269 Forward -324 -305 2.85027 0.288
sll1979 Forward -111 -92 5.30853 0.285
sll1979 Reverse -282 -301 2.45694 0.291
sll1979 Reverse -98 -117 1.76863 0.295
slr2094 Reverse -126 -145 5.30853 0.285
slr2094 Forward -139 -120 1.76863 0.295
slr2099 Forward -128 -109 1.6703 0.295
slr2103 Forward -130 -111 14.1583 0.141
sll1424 Reverse -134 -153 2.16195 0.295
slr1509 Reverse -259 -278 1.76863 0.295
slr1522 Reverse -232 -251 11.8967 0.21
slr1522 Forward -356 -337 2.9486 0.288
slr1522 Forward -257 -238 2.55527 0.288
sll1228 Reverse -82 -101 4.81688 0.285
slr1329 Forward -286 -267 5.40686 0.285
slr1329 Forward -151 -132 4.81688 0.285
slr1331 Reverse -245 -264 1.6703 0.295
sll1221 Forward -211 -192 5.80018 0.285
slr0810 Forward -74 -55 7.86512 0.285
slr0812 Reverse -170 -189 14.6499 0.141
slr0812 Forward -270 -251 13.8633 0.141
slr1353 Reverse -381 -400 2.6536 0.288
slr1964 Forward -350 -331 9.34008 0.285
sll1893 Forward -259 -240 3.34192 0.287
slr1984 Forward -295 -276 2.35861 0.295
ssl2717 Forward -134 -115 5.30853 0.285
sll1389 Reverse -130 -149 3.44025 0.287
sll1172 Reverse -349 -368 8.75009 0.285
slr1280 Forward -368 -349 8.75009 0.285
slr1287 Reverse -94 -113 2.85027 0.288
slr1288 Reverse -227 -246 4.32522 0.285
ssl2162 Forward -332 -313 3.63691 0.287
sll1103 Reverse -252 -271 3.04693 0.287
sll1097 Forward -329 -310 4.12856 0.285
slr1159 Reverse -138 -157 3.44025 0.287
slr1160 Forward -294 -275 4.12856 0.285
slr1164 Forward -393 -374 4.32522 0.285
slr1166 Reverse -320 -339 4.81688 0.285
slr1672 Reverse -159 -178 5.11187 0.285
slr1673 Reverse -267 -286 7.27514 0.285
slr1674 Forward -336 -317 2.9486 0.288
sll1557 Reverse -343 -362 8.94676 0.285
sll1557 Forward -311 -292 6.78348 0.285
slr0941 Reverse -207 -226 1.86696 0.295
slr0943 Reverse -355 -374 7.07848 0.285
slr0945 Forward -128 -109 3.24359 0.287
slr0945 Reverse -339 -358 1.76863 0.295
slr0947 Reverse -170 -189 8.65176 0.285
slr0950 Reverse -130 -149 3.44025 0.287
slr0954 Reverse -89 -108 2.55527 0.288
slr0959 Reverse -343 -362 3.14526 0.287
sll1537 Forward -352 -333 1.76863 0.295
slr1627 Reverse -126 -145 1.76863 0.295
sll1521 Forward -274 -255 8.55343 0.285
sll0427 Reverse -192 -211 2.06362 0.295
slr0443 Forward -35 -16 2.06362 0.295
sll0272 Forward -307 -288 4.81688 0.285
sll0360 Reverse -7 -26 4.12856 0.285
ssl0707 Forward -125 -106 7.07848 0.285
slr0404 Reverse -178 -197 7.07848 0.285
sll1848 Forward -398 -379 6.48849 0.285
slr1940 Forward -265 -246 1.76863 0.295
slr0325 Reverse -244 -263 14.6499 0.141
slr0329 Reverse -354 -373 2.06362 0.295
slr0169 Forward -304 -285 5.40686 0.285
sll0177 Reverse -73 -92 2.85027 0.288
sll0177 Forward -295 -276 2.55527 0.288
sll0167 Forward -220 -201 2.35861 0.295
slr0369 Forward -100 -81 3.73524 0.287
slr0380 Forward -196 -177 1.96529 0.295
sll0772 Forward -388 -369 5.30853 0.285
slr0354 Forward -362 -343 5.99684 0.285
sll0312 Forward -252 -233 4.03023 0.287
slr0001 Forward -224 -205 11.11 0.238
sll0006 Reverse -54 -73 3.04693 0.287
sll0204 Reverse -263 -282 1.76863 0.295
slr0224 Reverse -208 -227 3.34192 0.287
sll0410 Reverse -146 -165 3.14526 0.287
slr0434 Forward -282 -263 8.94676 0.285
sll0401 Forward -74 -55 6.48849 0.285
sll0401 Reverse -55 -74 1.96529 0.295
sll0071 Forward -360 -341 4.71854 0.285
slr0064 Reverse -292 -311 7.27514 0.285
sll0055 Forward -327 -308 10.9134 0.243
slr0468 Reverse -12 -31 2.75194 0.288
slr0477 Reverse -332 -351 7.96345 0.285
slr0483 Forward -266 -247 9.63507 0.285
sll0683 Reverse -249 -268 8.35677 0.285
sll0611 Reverse -336 -355 2.6536 0.288
sll0609 Reverse -136 -155 7.4718 0.285
slr0643 Reverse -239 -258 2.6536 0.288
sll0603 Forward -260 -241 1.6703 0.295
sll0396 Forward -263 -244 3.53858 0.287
sll0395 Reverse -119 -138 3.24359 0.287
sll0380 Reverse -299 -318 2.45694 0.291
sll0189 Forward -324 -305 7.27514 0.285
slr0211 Reverse -234 -253 1.96529 0.295
slr0904 Forward -214 -195 2.06362 0.295
slr0909 Forward -304 -285 5.11187 0.285
slr0918 Forward -325 -306 3.73524 0.287
slr0923 Reverse -309 -328 10.2251 0.282
slr0559 Reverse -20 -39 5.80018 0.285
sll0555 Reverse -30 -49 4.71854 0.285
slr0839 Forward -286 -267 3.04693 0.287
ssr1425 Reverse -268 -287 7.4718 0.285
ssl1533 Reverse -315 -334 4.12856 0.285
ssl1533 Forward -340 -321 3.24359 0.287
slr0072 Forward -77 -58 4.62021 0.285
slr0498 Reverse -304 -323 2.06362 0.295
sll0487 Forward -41 -22 3.73524 0.287
slr0509 Forward -361 -342 1.86696 0.295
slr0520 Forward -169 -150 2.55527 0.288
slr0615 Reverse -264 -283 5.2102 0.285
slr0626 Forward -394 -375 7.37347 0.285
sll0101 Forward -175 -156 3.04693 0.287
sll0101 Reverse -156 -175 2.75194 0.288
sll0289 Forward -280 -261 12.7816 0.161
slr0319 Reverse -269 -288 5.89851 0.285
sll0790 Reverse -319 -338 6.1935 0.285
sll0789 Forward -213 -194 6.29183 0.285
sll0047 Reverse -102 -121 8.4551 0.285
slr0032 Forward -151 -132 1.76863 0.295
slr0036 Forward -251 -232 2.6536 0.288
slr0528 Forward -252 -233 5.50519 0.285
slr0528 Reverse -186 -205 2.26028 0.295
sll0507 Forward -96 -77 5.40686 0.285
sll0498 Reverse -381 -400 3.63691 0.287
sll0493 Reverse -171 -190 2.55527 0.288
slr0925 Forward -180 -161 4.62021 0.285
slr0930 Reverse -335 -354 2.75194 0.288
slr0550 Reverse -337 -356 5.70185 0.285
slr0557 Forward -294 -275 4.71854 0.285
slr0659 Reverse -77 -96 6.1935 0.285
sll0622 Forward -132 -113 4.62021 0.285
slr1560 Forward -26 -7 2.26028 0.295
sll1486 Forward -170 -151 13.9616 0.141
sll0445 Forward -88 -69 4.52188 0.285
sll0436 Forward -302 -283 3.73524 0.287
slr0457 Reverse -355 -374 17.5015 0.085
sll0569 Reverse -277 -296 3.24359 0.287
sll0565 Forward -79 -60 3.14526 0.287
sll5035 Forward -358 -339 3.34192 0.287
slr5051 Reverse -121 -140 5.60352 0.285
slr7037 Forward -340 -321 5.70185 0.285
slr7095 Forward -273 -254 5.80018 0.285
slr7095 Reverse -338 -357 4.22689 0.285
slr7095 Reverse -177 -196 2.26028 0.295
slr7101 Reverse -305 -324 2.06362 0.295
slr7102 Forward -102 -83 5.60352 0.285
sll8034 Reverse -201 -220 1.57197 0.3
sll8048 Forward -111 -92 3.34192 0.287
slr6041 Reverse -319 -338 6.1935 0.285
slr6044 Forward -311 -292 4.81688 0.285
slr6050 Reverse -185 -204 1.6703 0.295
sll6059 Reverse -278 -297 2.55527 0.288
6803t13 Forward -400 -381 4.52188 0.285
6803t24 Reverse -298 -317 4.62021 0.285
6803t35 Forward -297 -278 1.6703 0.295
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.333  0.667  0.000  0.000  
0.000 0.111 0.000 0.889
0.000 0.111 0.889 0.000
0.000 0.111 0.889 0.000
0.000 1.000 0.000 0.000
0.000 0.556 0.333 0.111
0.000 0.778 0.000 0.222
0.000 0.222 0.000 0.778
0.000 0.333 0.556 0.111
0.000 0.111 0.889 0.000
0.111 0.889 0.000 0.000
0.000 0.222 0.778 0.000
0.222 0.000 0.667 0.111
0.000 0.889 0.111 0.000
0.444 0.222 0.222 0.111
0.111 0.000 0.778 0.111
0.000 1.000 0.000 0.000
0.222 0.778 0.000 0.000
0.333 0.667 0.000 0.000
0.889 0.000 0.111 0.000