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Details for NP_440825.1_3

Name NP_440825.1_3
Length 20
Regular expression GT[CT]TCCGCT[AT][TAC][TC]TC[TC]ATTGT
Central No

Motif logo

Genes containing this motif

11 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1325 Reverse -334 -353 3.34271 0.187
sll1296 Reverse -49 -68 0.392778 0.223
slr1248 Forward -346 -327 2.94938 0.187
slr1254 Reverse -313 -332 11.7992 0.148
slr2095 Forward -393 -374 3.6377 0.187
sll1217 Reverse -130 -149 5.01433 0.169
ssr1375 Forward -107 -88 5.01433 0.169
sll0142 Reverse -163 -182 6.19431 0.167
sll0320 Reverse -245 -264 4.42435 0.187
sll0586 Forward -151 -132 6.39097 0.167
slr0623 Reverse -213 -232 6.39097 0.167
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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