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Details for NP_440792.1_5

Name NP_440792.1_5
Length 20
Regular expression GCGAT[CT]GC[TG][GA][AG][TC][TC]TACC[TA]GA
Central No

Motif logo

Genes containing this motif

94 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Forward -166 -147 6.58763 0.237
slr1125 Forward -327 -308 5.211 0.254
sll0223 Reverse -316 -335 5.50599 0.246
slr1099 Forward -208 -189 6.39097 0.237
slr1778 Forward -287 -268 6.68596 0.237
slr1783 Reverse -268 -287 5.211 0.254
sll1664 Reverse -316 -335 7.57094 0.237
slr1074 Forward -91 -72 8.65258 0.237
sll1024 Reverse -8 -27 10.0292 0.237
slr1591 Forward -315 -296 7.37428 0.237
slr1760 Forward -338 -319 8.35759 0.237
slr1763 Forward -138 -119 4.42435 0.281
sll1635 Reverse -186 -205 5.89931 0.244
slr2041 Forward -141 -122 5.11266 0.254
sll0995 Reverse -126 -145 12.6841 0.159
slr1035 Forward -256 -237 12.5858 0.159
sll1584 Forward -337 -318 5.11266 0.254
slr2023 Reverse -258 -277 7.27595 0.237
sll1072 Reverse -220 -239 5.70265 0.246
slr1900 Reverse -334 -353 7.86593 0.237
sll1787 Forward -181 -162 5.80098 0.244
ssr2009 Reverse -227 -246 18.3873 0.0754
slr2071 Forward -340 -321 13.9625 0.12
sll1746 Forward -234 -215 7.57094 0.237
slr1837 Forward -160 -141 10.2259 0.237
sll1715 Forward -373 -354 6.19431 0.237
sll1714 Forward -39 -20 6.19431 0.237
slr1536 Reverse -11 -30 7.07928 0.237
slr1546 Forward -263 -244 19.764 0.0754
slr1435 Forward -334 -315 8.16093 0.237
slr1856 Reverse -124 -143 7.47261 0.237
sll1760 Reverse -305 -324 7.7676 0.237
sll1702 Forward -217 -198 4.12936 0.3
sll1161 Forward -66 -47 7.66927 0.237
sll1905 Forward -286 -267 11.4058 0.219
slr2004 Forward -310 -291 5.60432 0.246
slr1724 Reverse -105 -124 5.50599 0.246
slr1730 Reverse -323 -342 7.17762 0.237
slr0269 Forward -253 -234 6.68596 0.237
slr2125 Forward -120 -101 8.45592 0.237
slr0813 Forward -355 -336 9.24257 0.237
sll1262 Forward -347 -328 7.66927 0.237
sll1262 Reverse -340 -359 6.29264 0.237
slr1350 Forward -261 -242 8.94757 0.237
slr1962 Reverse -124 -143 6.19431 0.237
sll1382 Forward -307 -288 8.55425 0.237
slr1474 Reverse -124 -143 8.55425 0.237
ssl3044 Reverse -230 -249 18.584 0.0754
sll1556 Reverse -233 -252 7.27595 0.237
ssr2723 Forward -316 -297 6.78429 0.237
sll1526 Reverse -329 -348 9.14423 0.237
sll0420 Reverse -235 -254 6.39097 0.237
sll0273 Forward -253 -234 9.3409 0.237
sll0272 Forward -207 -188 4.916 0.26
sll0364 Reverse -63 -82 7.17762 0.237
sll0354 Forward -397 -378 5.01433 0.255
slr0406 Reverse -84 -103 5.01433 0.255
slr0147 Forward -149 -130 5.80098 0.244
ssr3307 Reverse -297 -316 4.42435 0.281
ssr0536 Reverse -102 -121 6.09597 0.24
ssl0312 Forward -322 -303 9.63589 0.237
sll0336 Reverse -81 -100 14.1591 0.12
slr0346 Reverse -249 -268 6.19431 0.237
slr0350 Forward -332 -313 16.6174 0.113
sll0020 Reverse -284 -303 5.11266 0.254
slr0008 Forward -283 -264 4.52268 0.279
sll0204 Forward -267 -248 6.68596 0.237
sll0194 Forward -88 -69 7.66927 0.237
slr0229 Reverse -305 -324 7.66927 0.237
sll0416 Forward -125 -106 5.40766 0.247
slr0476 Reverse -252 -271 5.50599 0.246
slr0488 Reverse -265 -284 6.58763 0.237
ssl0738 Forward -222 -203 13.8641 0.12
slr0194 Forward -163 -144 4.52268 0.279
slr0211 Reverse -60 -79 16.0274 0.113
sll0541 Forward -376 -357 6.19431 0.237
slr0829 Forward -398 -379 14.5524 0.12
sll0083 Forward -265 -246 8.16093 0.237
sll0676 Reverse -223 -242 10.4225 0.237
ssr1175 Forward -239 -220 10.4225 0.237
sll0493 Reverse -100 -119 6.88262 0.237
slr0926 Reverse -123 -142 6.68596 0.237
sll0900 Forward -81 -62 4.22769 0.294
sll0626 Forward -220 -201 5.60432 0.246
slr1579 Forward -331 -312 4.62101 0.279
sll0729 Reverse -240 -259 15.6341 0.113
sll0451 Reverse -2 -21 5.99764 0.24
slr0457 Reverse -364 -383 13.8641 0.12
slr0459 Reverse -290 -309 5.40766 0.247
slr1187 Forward -301 -282 4.52268 0.279
slr0587 Forward -274 -255 8.16093 0.237
slr7008 Reverse -182 -201 6.88262 0.237
sll7033 Forward -311 -292 5.99764 0.24
sll7043 Forward -367 -348 9.83255 0.237
sll7077 Reverse -206 -225 9.83255 0.237
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 1.000 0.000 0.000
0.167 0.083 0.750 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.667 0.000 0.333
0.083 0.000 0.917 0.000
0.083 0.917 0.000 0.000
0.083 0.167 0.333 0.417
0.250 0.000 0.667 0.083
0.667 0.000 0.333 0.000
0.167 0.250 0.167 0.417
0.000 0.417 0.000 0.583
0.000 0.000 0.000 1.000
0.833 0.000 0.167 0.000
0.000 0.917 0.000 0.083
0.000 1.000 0.000 0.000
0.333 0.083 0.167 0.417
0.000 0.083 0.833 0.083
1.000 0.000 0.000 0.000