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Details for NP_440783.1_5

Name NP_440783.1_5
Length 20
Regular expression [GT]G[CT]A[CA]CGG[GC][GA][TG][GC]GG[GT]C[CG][GC]GG
Central Yes

Motif logo

Genes containing this motif

186 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1485 Reverse -149 -168 -6.1954 0.29
slr1119 Forward -248 -229 -4.72043 0.276
sll1061 Forward -283 -264 8.45592 0.126
sll1051 Reverse -333 -352 0.491109 0.209
slr0721 Forward -233 -214 -3.54046 0.275
sll0696 Forward -334 -315 -5.60541 0.281
sll0227 Reverse -331 -350 -4.52377 0.276
slr1417 Reverse -202 -221 10.4225 0.126
slr1417 Reverse -77 -96 -1.86883 0.251
sll1319 Forward -150 -131 -6.29373 0.29
slr1102 Forward -173 -154 4.71934 0.15
sll1030 Forward -245 -226 -5.50708 0.277
slr1776 Forward -366 -347 15.4374 0.0614
slr1779 Reverse -273 -292 -3.93378 0.276
sll1667 Reverse -300 -319 -4.81876 0.276
sll1666 Forward -185 -166 1.37609 0.19
slr1796 Forward -379 -360 -4.81876 0.276
slr1290 Forward -329 -310 -0.885524 0.241
sll1192 Forward -353 -334 -3.3438 0.274
sll1191 Reverse -332 -351 -5.80207 0.285
ssr2153 Reverse -282 -301 -3.3438 0.274
slr0971 Forward -400 -381 8.06259 0.126
sll1022 Reverse -232 -251 -5.40875 0.277
slr0670 Reverse -178 -197 -0.000545616 0.209
slr0670 Reverse -249 -268 -2.65548 0.272
sll0648 Reverse -265 -284 -3.24547 0.273
slr1609 Forward -265 -246 -5.50708 0.277
slr1053 Reverse -192 -211 -2.65548 0.272
slr1763 Forward -346 -327 -6.29373 0.29
slr2051 Reverse -211 -230 -2.65548 0.272
sll0998 Reverse -70 -89 -0.590531 0.236
slr1023 Reverse -223 -242 -6.68705 0.3
slr1024 Reverse -281 -300 -6.29373 0.29
sll0985 Reverse -179 -198 3.14605 0.16
slr1037 Forward -251 -232 3.14605 0.16
sll0981 Reverse -218 -237 7.7676 0.126
sll1580 Forward -162 -143 -5.50708 0.277
sll1568 Forward -228 -209 -6.49039 0.295
sll1920 Forward -100 -81 -6.49039 0.295
slr2023 Reverse -89 -108 -6.49039 0.295
sll1915 Forward -222 -203 0.0977854 0.209
sll1818 Forward -237 -218 -4.72043 0.276
sll1817 Forward -327 -308 -4.72043 0.276
ssl3436 Forward -185 -166 6.4893 0.144
ssl3436 Forward -388 -369 -1.18052 0.246
sll1805 Reverse -85 -104 6.98095 0.143
sll1804 Reverse -96 -115 -5.99873 0.289
slr1899 Forward -307 -288 -4.81876 0.276
sll1792 Forward -163 -144 -3.04881 0.273
sll1791 Reverse -318 -337 1.17943 0.191
slr1206 Reverse -55 -74 -6.29373 0.29
sll1736 Reverse -371 -390 1.76941 0.19
sll1721 Forward -395 -376 -4.91709 0.276
slr1840 Reverse -372 -391 5.40766 0.15
slr1228 Forward -240 -221 0.0977854 0.209
ssl2245 Reverse -358 -377 8.94757 0.126
ssr2060 Forward -199 -180 -0.000545616 0.209
sll1127 Reverse -362 -381 -3.73712 0.275
sll1281 Reverse -322 -341 -5.11376 0.276
sll0867 Reverse -147 -166 9.24257 0.126
sll0861 Forward -305 -286 18.9773 0.0392
slr1853 Forward -125 -106 3.24438 0.16
slr1854 Forward -319 -300 -6.1954 0.29
slr1874 Forward -163 -144 1.0811 0.193
sll1765 Forward -125 -106 -3.14714 0.273
sll1761 Reverse -187 -206 1.67108 0.19
sll1758 Reverse -297 -316 -4.32711 0.276
slr1881 Forward -205 -186 -4.32711 0.276
ssr3189 Forward -366 -347 5.01433 0.15
sml0007 Reverse -313 -332 -5.50708 0.277
sll1703 Reverse -134 -153 -5.80207 0.285
sll1702 Forward -202 -183 -3.63879 0.275
slr1822 Reverse -254 -273 -0.983855 0.243
sll0847 Reverse -339 -358 4.12936 0.15
slr1246 Forward -163 -144 -3.04881 0.273
sll1150 Reverse -229 -248 1.96607 0.19
slr1254 Reverse -279 -298 5.11266 0.15
slr1254 Reverse -273 -292 -5.70374 0.284
slr1260 Reverse -215 -234 0.491109 0.209
slr1262 Forward -247 -228 -4.72043 0.276
slr2059 Forward -390 -371 -6.09707 0.29
sll1909 Forward -286 -267 0.0977854 0.209
slr1994 Forward -143 -124 4.32602 0.15
sll1905 Reverse -95 -114 -6.68705 0.3
ssl0467 Forward -347 -328 -5.99873 0.289
sll0242 Forward -258 -239 0.0977854 0.209
slr2079 Reverse -259 -278 -1.86883 0.251
slr2105 Reverse -334 -353 -3.24547 0.273
sll1222 Forward -364 -345 9.3409 0.126
sll1263 Forward -127 -108 -4.52377 0.276
sll1252 Forward -285 -266 -0.885524 0.241
slr1962 Forward -190 -171 1.67108 0.19
ssl2717 Reverse -144 -163 -5.70374 0.284
slr1276 Forward -334 -315 -2.95047 0.273
slr1277 Reverse -145 -164 -3.54046 0.275
slr1282 Reverse -300 -319 0.196116 0.209
sll1435 Reverse -45 -64 -2.0655 0.251
sll1103 Forward -153 -134 -5.80207 0.285
slr1679 Forward -201 -182 9.14423 0.126
slr1686 Forward -337 -318 3.6377 0.156
sll1553 Forward -105 -86 -4.13045 0.276
slr1697 Reverse -179 -198 -4.13045 0.276
sll0909 Reverse -247 -266 0.786102 0.207
slr1626 Reverse -105 -124 6.39097 0.144
sll1522 Reverse -97 -116 -4.81876 0.276
sll0264 Reverse -193 -212 -1.67217 0.251
slr0157 Forward -383 -364 0.58944 0.209
slr1926 Reverse -216 -235 -6.49039 0.295
slr1934 Reverse -223 -242 -5.99873 0.289
sll1849 Forward -381 -362 -1.7705 0.251
slr1939 Reverse -370 -389 2.65439 0.172
sll0944 Reverse -370 -389 1.67108 0.19
sll0301 Forward -334 -315 4.03102 0.15
sll0298 Forward -214 -195 -2.95047 0.273
slr0361 Forward -140 -121 -4.72043 0.276
slr0373 Forward -362 -343 -1.37718 0.251
slr0373 Forward -363 -344 -5.99873 0.289
slr0784 Forward -217 -198 -3.83545 0.275
slr0356 Forward -288 -269 1.57275 0.19
sll0310 Forward -375 -356 -2.0655 0.251
sll0192 Reverse -285 -304 -1.67217 0.251
slr0438 Forward -186 -167 -1.18052 0.246
slr0067 Forward -315 -296 -5.40875 0.277
slr0474 Forward -137 -118 4.52268 0.15
slr0487 Reverse -100 -119 -5.01543 0.276
sll0686 Reverse -301 -320 9.24257 0.126
slr0636 Forward -293 -274 7.86593 0.126
sll0379 Forward -257 -238 -0.787193 0.241
sll0376 Reverse -92 -111 -0.688862 0.238
sll0368 Forward -234 -215 1.27776 0.19
slr0426 Reverse -103 -122 1.27776 0.19
sll0188 Forward -122 -103 -3.44213 0.275
slr0191 Reverse -75 -94 -3.44213 0.275
slr0193 Forward -159 -140 -2.16383 0.254
slr0204 Forward -375 -356 -6.49039 0.295
slr0904 Forward -313 -294 -6.68705 0.3
sgl0001 Forward -366 -347 -1.67217 0.251
ssl1045 Forward -23 -4 -1.67217 0.251
sll0541 Forward -377 -358 -4.03212 0.276
slr0072 Reverse -22 -41 -0.000545616 0.209
slr0078 Forward -375 -356 -2.65548 0.272
slr0089 Reverse -152 -171 2.94938 0.164
slr0090 Forward -201 -182 -4.32711 0.276
sll0489 Forward -351 -332 -2.0655 0.251
slr0505 Reverse -300 -319 -5.31042 0.276
sll0473 Forward -369 -350 -3.83545 0.275
slr0518 Reverse -352 -371 -3.83545 0.275
sll0095 Forward -167 -148 -4.52377 0.276
sll0289 Reverse -105 -124 -6.58872 0.299
sll0288 Forward -300 -281 -5.31042 0.276
sll0286 Forward -351 -332 1.86774 0.19
slr0319 Reverse -271 -290 -1.86883 0.251
sll0788 Reverse -379 -398 -3.04881 0.273
slr0800 Forward -163 -144 -3.04881 0.273
sll0043 Forward -269 -250 -5.11376 0.276
sll0034 Reverse -218 -237 5.11266 0.15
sll0493 Reverse -173 -192 -5.31042 0.276
sll0900 Forward -136 -117 -1.7705 0.251
slr0657 Reverse -4 -23 -4.72043 0.276
sll1498 Forward -113 -94 -4.52377 0.276
slr1557 Reverse -58 -77 -4.52377 0.276
sll1496 Reverse -192 -211 -3.73712 0.275
ssl2874 Reverse -16 -35 -5.11376 0.276
slr1575 Forward -289 -270 -5.11376 0.276
slr1588 Reverse -362 -381 -0.4922 0.233
slr1588 Forward -357 -338 -5.01543 0.276
sll0729 Forward -400 -381 -6.09707 0.29
slr1656 Forward -30 -11 -5.01543 0.276
slr1666 Reverse -321 -340 -0.197208 0.218
slr1186 Reverse -161 -180 -6.58872 0.299
slr1188 Reverse -325 -344 -3.83545 0.275
slr1188 Reverse -331 -350 -6.68705 0.3
slr0593 Reverse -154 -173 -4.81876 0.276
slr5024 Forward -211 -192 -5.9004 0.289
sll5046 Reverse -342 -361 -1.67217 0.251
sll5047 Forward -234 -215 -1.18052 0.246
sll5048 Forward -387 -368 -3.04881 0.273
slr5054 Reverse -126 -145 0.58944 0.209
ssl5108 Reverse -210 -229 1.47442 0.19
sll7028 Forward -103 -84 1.67108 0.19
sll7030 Forward -212 -193 -2.75381 0.273
slr7060 Reverse -206 -225 3.93269 0.15
slr8037 Forward -30 -11 4.42435 0.15
ssl6018 Forward -137 -118 -5.31042 0.276
ssr6020 Reverse -286 -305 -5.31042 0.276
slr6042 Forward -215 -196 -3.14714 0.273
ssl6077 Forward -137 -118 -5.31042 0.276
ssr6079 Reverse -286 -305 -5.31042 0.276
6803t02 Forward -369 -350 -6.1954 0.29
6803t12 Reverse -100 -119 -5.11376 0.276
6803t13 Forward -363 -344 -6.1954 0.29
6803t35 Forward -295 -276 -6.09707 0.29
6803t41 Forward -143 -124 -4.72043 0.276
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.778  0.222  
0.000 0.000 1.000 0.000
0.111 0.667 0.000 0.222
1.000 0.000 0.000 0.000
0.222 0.778 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.222 0.778 0.000
0.222 0.000 0.778 0.000
0.000 0.000 0.222 0.778
0.000 0.444 0.556 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.111 0.111 0.556 0.222
0.000 0.889 0.000 0.111
0.000 0.778 0.222 0.000
0.000 0.333 0.667 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000