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Details for NP_440781.1_1

Name NP_440781.1_1
Length 15
Regular expression T[ATC][GT][TG]GC[CA][GA][TG]CA[TG][TG]GG
Central Yes

Motif logo

Genes containing this motif

97 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1501 Reverse -188 -202 13.8643 0.266
slr1130 Reverse -29 -43 18.6825 0.121
slr0723 Reverse -51 -65 16.1259 0.227
slr0741 Reverse -284 -298 10.7177 0.296
slr0744 Reverse -361 -375 11.111 0.293
slr0251 Reverse -384 -398 13.6676 0.266
slr1104 Forward -380 -366 14.8476 0.248
ssr2998 Reverse -287 -301 11.3077 0.293
slr1798 Reverse -229 -243 18.6825 0.121
slr0984 Forward -86 -72 13.0776 0.266
slr1077 Reverse -229 -243 11.111 0.293
sll1025 Forward -36 -22 10.816 0.296
sll1023 Reverse -359 -373 13.2743 0.266
sll1020 Reverse -178 -192 11.111 0.293
sll0641 Forward -105 -91 11.996 0.27
sll0635 Reverse -134 -148 10.7177 0.296
sll1510 Reverse -231 -245 13.0776 0.266
sll1004 Forward -205 -191 21.6324 0.0352
sll1642 Reverse -280 -294 12.8809 0.266
slr1771 Reverse -155 -169 11.2093 0.293
sll1749a Reverse -239 -253 11.996 0.27
slr1851 Forward -355 -341 11.996 0.27
slr2035 Forward -154 -140 10.9143 0.296
sll1938 Reverse -374 -388 12.586 0.266
slr2043 Forward -214 -200 12.586 0.266
slr1385 Reverse -317 -331 10.521 0.296
slr1706 Reverse -2 -16 11.6026 0.286
sll1926 Forward -293 -279 13.2743 0.266
slr2018 Forward -187 -173 12.291 0.266
sll1791 Reverse -317 -331 11.3077 0.293
slr1202 Forward -51 -37 17.5025 0.167
slr1207 Forward -126 -112 13.3726 0.266
slr2071 Forward -160 -146 10.7177 0.296
sll1739 Reverse -45 -59 16.5192 0.216
slr1536 Forward -131 -117 17.0108 0.197
slr1544 Forward -133 -119 11.5043 0.289
slr1436 Forward -173 -159 13.2743 0.266
slr1363 Forward -188 -174 10.521 0.296
sll1618 Reverse -38 -52 10.521 0.296
slr1742 Forward -82 -68 10.521 0.296
sll0858 Reverse -243 -257 17.5025 0.167
sll0855 Reverse -57 -71 12.586 0.266
sll0847 Reverse -240 -254 10.7177 0.296
sll0837 Reverse -12 -26 11.701 0.281
slr0867 Forward -96 -82 11.701 0.281
slr0868 Reverse -163 -177 16.2242 0.227
sll1165 Reverse -31 -45 12.3893 0.266
slr1243 Forward -127 -113 12.3893 0.266
sll1159 Forward -225 -211 12.3893 0.266
slr1245 Reverse -344 -358 12.3893 0.266
slr1719 Forward -246 -232 15.6342 0.246
sll1592 Reverse -336 -350 12.9793 0.266
sll1988 Reverse -263 -277 15.8309 0.241
sll1231 Reverse -123 -137 14.7492 0.248
slr1331 Forward -394 -380 22.8124 0.018
sll1384 Forward -233 -219 14.8476 0.248
sll1378 Reverse -201 -215 11.3077 0.293
sll1370 Forward -372 -358 12.7826 0.266
sll1435 Reverse -271 -285 19.4691 0.121
ssl2153 Reverse -16 -30 14.0609 0.266
ssl2148 Forward -365 -351 22.5174 0.018
sll1535 Forward -254 -240 10.521 0.296
sll0264 Reverse -192 -206 13.6676 0.266
sll1853 Reverse -35 -49 11.8976 0.27
sll0301 Forward -400 -386 15.3392 0.247
slr0169 Reverse -88 -102 19.1741 0.121
sll0166 Reverse -176 -190 10.6193 0.296
slr0369 Forward -57 -43 12.291 0.266
slr0347 Reverse -177 -191 13.1759 0.266
sll0192 Reverse -206 -220 19.2725 0.121
slr0435 Reverse -224 -238 12.8809 0.266
slr0064 Reverse -317 -331 11.5043 0.289
slr0474 Forward -98 -84 11.2093 0.293
slr0643 Reverse -109 -123 10.816 0.296
slr0418 Forward -276 -262 11.0127 0.296
slr0920 Forward -107 -93 12.291 0.266
sll0891 Reverse -259 -273 10.6193 0.296
ssl1690 Reverse -3 -17 10.6193 0.296
slr0921 Forward -380 -366 10.6193 0.296
slr0581 Reverse -62 -76 11.8976 0.27
slr0582 Reverse -370 -384 11.8976 0.27
slr0081 Reverse -269 -283 17.6008 0.167
slr0498 Forward -375 -361 12.3893 0.266
ssr1038 Forward -221 -207 11.111 0.293
sll0493 Forward -275 -261 16.7159 0.211
slr0554 Forward -60 -46 11.111 0.293
slr1451 Forward -343 -329 11.996 0.27
slr1459 Reverse -131 -145 18.8791 0.121
sll1549 Reverse -168 -182 15.2409 0.247
slr1655 Forward -337 -323 15.2409 0.247
slr1184 Forward -81 -67 12.586 0.266
slr1188 Forward -58 -44 10.816 0.296
slr1189 Reverse -376 -390 14.7492 0.248
slr0597 Reverse -370 -384 14.4542 0.263
sll5094 Reverse -93 -107 18.2892 0.139
slr6096 Forward -64 -50 10.6193 0.296
6803t03 Reverse -60 -74 18.6825 0.121
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.111  0.889  
0.444 0.222 0.000 0.333
0.111 0.000 0.556 0.333
0.000 0.000 0.222 0.778
0.111 0.000 0.889 0.000
0.000 1.000 0.000 0.000
0.222 0.778 0.000 0.000
0.333 0.000 0.667 0.000
0.000 0.111 0.222 0.667
0.000 1.000 0.000 0.000
0.889 0.000 0.111 0.000
0.111 0.000 0.333 0.556
0.000 0.000 0.444 0.556
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000