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Details for NP_440736.1_10

Name NP_440736.1_10
Length 19
Regular expression TGGC[ACG][CA]G[GAC]G[GC][GTC][CA]TC[AC]A[GA][GC][CA]
Central Yes

Motif logo

Genes containing this motif

39 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1401 Reverse -183 -201 12.4089 0.293
slr0744 Forward -336 -318 12.1139 0.293
sll1662 Reverse -103 -121 12.0155 0.293
slr1798 Forward -128 -110 12.0155 0.293
sll1647 Reverse -212 -230 15.7521 0.293
sll1643 Forward -78 -60 13.4905 0.293
slr1762 Reverse -166 -184 13.4905 0.293
sll1946 Reverse -237 -255 13.7855 0.293
slr1394 Reverse -83 -101 12.3105 0.293
slr1710 Forward -162 -144 15.9488 0.293
slr1140 Forward -293 -275 13.4905 0.293
slr1197 Forward -110 -92 12.9988 0.293
sll1746 Forward -125 -107 23.5203 0.0306
sll1746 Forward -341 -323 14.5721 0.293
sll1746 Forward -158 -140 12.9988 0.293
slr1856 Reverse -347 -365 12.4089 0.293
sll1702 Forward -118 -100 15.1621 0.293
slr2003 Reverse -328 -346 12.2122 0.293
sll1612 Reverse -147 -165 13.8838 0.293
sll1586 Reverse -371 -389 14.5721 0.293
ssl0438 Forward -355 -337 12.6055 0.293
sll1411 Forward -371 -353 12.4089 0.293
ssl2749 Forward -88 -70 12.4089 0.293
ssr1391 Forward -220 -202 12.6055 0.293
slr1344 Forward -380 -362 13.2938 0.293
slr1968 Reverse -227 -245 15.2604 0.293
slr1673 Reverse -129 -147 17.2271 0.293
sll1527 Forward -275 -257 12.5072 0.293
slr1645 Reverse -58 -76 12.0155 0.293
slr0152 Forward -398 -380 12.9005 0.293
slr0354 Reverse -372 -390 17.3254 0.293
slr0646 Forward -364 -346 22.1436 0.0452
sll0488 Forward -384 -366 15.4571 0.293
slr0626 Forward -222 -204 12.1139 0.293
slr0108 Forward -311 -293 12.7038 0.293
sll1546 Forward -273 -255 13.8838 0.293
slr1661 Reverse -217 -235 13.8838 0.293
slr1182 Reverse -150 -168 12.9988 0.293
sll0563 Forward -236 -218 16.0471 0.293
ssl5031 Reverse -288 -306 13.2938 0.293
6803t36 Forward -200 -182 12.7038 0.293
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 0.158 0.737 0.105
0.000 0.000 1.000 0.000
0.000 0.947 0.053 0.000
0.316 0.316 0.316 0.053
0.263 0.632 0.105 0.000
0.000 0.000 1.000 0.000
0.211 0.211 0.474 0.105
0.105 0.000 0.895 0.000
0.000 0.474 0.526 0.000
0.105 0.211 0.421 0.263
0.421 0.526 0.000 0.053
0.000 0.053 0.000 0.947
0.053 0.789 0.053 0.105
0.737 0.263 0.000 0.000
1.000 0.000 0.000 0.000
0.368 0.158 0.474 0.000
0.000 0.316 0.579 0.105
0.474 0.526 0.000 0.000