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Details for NP_440730.1_4

Name NP_440730.1_4
Length 20
Regular expression GGC[AT][GA][TC]T[TG][GCT]C[CA][GC]GC[GTA]GG[AG]AA
Central No

Motif logo

Genes containing this motif

204 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1494 Reverse -112 -131 9.73422 0.165
sll1054 Forward -175 -156 -1.18052 0.27
sll0716 Forward -373 -354 -4.32711 0.298
sll0708 Forward -46 -27 -4.42544 0.298
sll0230 Forward -323 -304 -2.0655 0.28
sll0219 Reverse -374 -393 -3.73712 0.298
slr1414 Forward -165 -146 -4.03212 0.298
sll1683 Forward -62 -43 -0.197208 0.26
sll1683 Forward -343 -324 -4.6221 0.298
sll1193 Reverse -219 -238 -3.24547 0.297
sll0939 Forward -364 -345 0.196116 0.248
slr1069 Forward -299 -280 -1.7705 0.28
slr1087 Reverse -317 -336 -1.08219 0.27
slr0689 Reverse -145 -164 11.8975 0.165
sll0639 Reverse -263 -282 1.27776 0.237
slr1601 Reverse -5 -24 -0.39387 0.269
slr1609 Reverse -48 -67 -3.24547 0.297
slr2048 Forward -160 -141 -4.91709 0.298
slr1910 Reverse -178 -197 4.62101 0.237
slr1910 Reverse -21 -40 0.884433 0.242
ssr1720 Forward -40 -21 -5.60541 0.3
sll0983 Forward -332 -313 -5.21209 0.298
slr1378 Forward -120 -101 -1.47551 0.277
slr1391 Reverse -14 -33 -1.18052 0.27
slr1394 Reverse -135 -154 -4.6221 0.298
sll1286 Reverse -292 -311 2.45773 0.237
sll1286 Forward -317 -298 -0.885524 0.27
sll1286 Forward -316 -297 -4.91709 0.298
slr1699 Forward -208 -189 4.52268 0.237
ssl3093 Reverse -359 -378 -4.6221 0.298
sll1580 Forward -293 -274 -5.21209 0.298
sll1570 Forward -117 -98 15.5357 0.0954
slr2008 Forward -327 -308 -4.32711 0.298
slr2013 Forward -215 -196 1.67108 0.237
slr1134 Forward -205 -186 4.42435 0.237
sll1078 Forward -152 -133 1.37609 0.237
sll1077 Reverse -82 -101 -2.95047 0.297
slr1142 Forward -355 -336 -2.95047 0.297
slr1146 Forward -166 -147 -4.81876 0.298
slr1147 Reverse -78 -97 -4.81876 0.298
slr1150 Reverse -78 -97 1.57275 0.237
sll1068 Reverse -329 -348 2.45773 0.237
ssl3451 Reverse -47 -66 2.45773 0.237
slr1890 Forward -84 -65 2.45773 0.237
sll1818 Reverse -211 -230 -5.40875 0.298
sll1808 Forward -330 -311 -5.60541 0.3
sll1805 Reverse -116 -135 -1.08219 0.27
sll1801 Reverse -107 -126 -4.72043 0.298
slr1896 Forward -238 -219 -4.72043 0.298
sll1787 Forward -80 -61 -4.32711 0.298
sll1123 Forward -237 -218 -1.86883 0.28
slr1205 Reverse -145 -164 -0.197208 0.26
slr1206 Forward -357 -338 -3.73712 0.298
slr2070 Forward -398 -379 -5.50708 0.298
slr2074 Reverse -64 -83 -1.7705 0.28
sll1743 Forward -165 -146 -5.50708 0.298
sll1740 Forward -289 -270 -1.27885 0.274
slr1839 Forward -210 -191 1.86774 0.237
slr1840 Forward -296 -277 2.26107 0.237
sll1451 Forward -304 -285 1.27776 0.237
ssl3177 Reverse -151 -170 1.17943 0.24
ssl3177 Reverse -217 -236 -0.983855 0.27
ssl3177 Reverse -19 -38 -2.95047 0.297
slr1223 Forward -329 -310 -2.26216 0.284
sll1130 Forward -159 -140 -0.197208 0.26
sll1362 Reverse -333 -352 -5.60541 0.3
slr1357 Forward -383 -364 -0.590531 0.269
sll0871 Reverse -36 -55 -2.16383 0.28
slr0884 Forward -280 -261 -2.16383 0.28
sll0869 Forward -22 -3 -4.6221 0.298
sll0863 Reverse -266 -285 -1.96717 0.28
sll1773 Reverse -178 -197 -5.11376 0.298
sll1765 Forward -279 -260 -1.96717 0.28
slr1888 Forward -148 -129 -0.688862 0.27
sll2006 Forward -219 -200 5.40766 0.237
sll2006 Forward -218 -199 -5.50708 0.298
sll1709 Reverse -287 -306 0.196116 0.248
slr1811 Reverse -274 -293 -1.47551 0.277
slr1814 Forward -374 -355 -1.96717 0.28
sll1694 Reverse -206 -225 -1.08219 0.27
sll1687 Forward -319 -300 -0.787193 0.27
sll0858 Forward -72 -53 1.76941 0.237
sll0846 Forward -68 -49 -2.75381 0.297
slr0862 Reverse -122 -141 -2.75381 0.297
slr1258 Reverse -281 -300 -5.50708 0.298
slr2059 Forward -263 -244 4.22769 0.237
sll1954 Forward -141 -122 -4.91709 0.298
slr2062 Reverse -288 -307 -4.91709 0.298
sll1949 Reverse -224 -243 -5.21209 0.298
slr2067 Forward -123 -104 -5.21209 0.298
sll1613 Forward -31 -12 10.4225 0.165
sll1613 Reverse -5 -24 -4.6221 0.298
slr1724 Forward -195 -176 -4.13045 0.298
sll1600 Forward -349 -330 9.24257 0.165
slr2102 Forward -387 -368 -4.13045 0.298
slr1520 Forward -241 -222 3.53937 0.237
slr1522 Reverse -381 -400 -4.32711 0.298
slr2108 Reverse -352 -371 -4.81876 0.298
slr2112 Forward -116 -97 -3.14714 0.297
slr2123 Reverse -252 -271 1.47442 0.237
sll1228 Forward -324 -305 -3.73712 0.298
slr1330 Reverse -76 -95 -4.13045 0.298
sll1225 Forward -362 -343 -3.83545 0.298
ssl2420 Forward -98 -79 -3.83545 0.298
sll0814 Reverse -376 -395 -5.40875 0.298
slr0812 Reverse -331 -350 -2.85214 0.297
slr0815 Reverse -60 -79 -5.11376 0.298
sll1255 Forward -196 -177 -4.13045 0.298
sll1253 Reverse -302 -321 -5.21209 0.298
slr1344 Reverse -285 -304 -4.6221 0.298
slr1351 Forward -315 -296 -4.6221 0.298
sll1897 Reverse -31 -50 -3.3438 0.297
sll1894 Forward -305 -286 -3.63879 0.298
slr1970 Reverse -26 -45 -5.01543 0.298
sll1879 Forward -240 -221 1.37609 0.237
slr1982 Forward -270 -251 -1.47551 0.277
sll1174 Forward -234 -215 -1.7705 0.28
ssr2130 Reverse -171 -190 -4.72043 0.298
sll1444 Reverse -126 -145 -3.73712 0.298
sll1095 Forward -217 -198 1.0811 0.242
slr1166 Reverse -79 -98 1.27776 0.237
slr1169 Reverse -302 -321 -2.0655 0.28
sll1561 Forward -146 -127 0.687771 0.242
slr1681 Reverse -204 -223 0.687771 0.242
sll0916 Reverse -352 -371 2.16274 0.237
ssr2723 Forward -155 -136 -1.67217 0.28
slr1645 Forward -61 -42 -4.91709 0.298
slr1646 Reverse -117 -136 -5.11376 0.298
sll0418 Forward -280 -261 -0.4922 0.269
sll0272 Forward -254 -235 -3.83545 0.298
ssr0482 Forward -376 -357 9.3409 0.165
slr0407 Forward -113 -94 -2.95047 0.297
slr0150 Forward -286 -267 15.3391 0.0954
slr0151 Reverse -296 -315 0.884433 0.242
sll0142 Reverse -305 -324 4.81767 0.237
slr1926 Forward -258 -239 -1.57384 0.28
slr1950 Forward -211 -192 -5.21209 0.298
sll0944 Reverse -340 -359 -5.31042 0.298
slr0328 Reverse -102 -121 5.40766 0.237
slr0328 Reverse -74 -93 0.196116 0.248
ssl0564 Forward -211 -192 2.26107 0.237
slr0362 Reverse -56 -75 -5.40875 0.298
sml0001 Reverse -192 -211 0.0977854 0.248
slr0775 Reverse -339 -358 -3.63879 0.298
slr0780 Reverse -106 -125 5.30933 0.237
slr0350 Reverse -361 -380 -3.3438 0.297
sll0314 Forward -316 -297 2.55606 0.237
slr0008 Forward -162 -143 -4.81876 0.298
sll0005 Forward -356 -337 -2.16383 0.28
slr0021 Forward -303 -284 -3.14714 0.297
sll0198 Forward -397 -378 -4.13045 0.298
slr0061 Forward -347 -328 4.42435 0.237
slr0637 Forward -173 -154 -0.4922 0.269
slr0639 Forward -386 -367 0.786102 0.242
slr0212 Forward -306 -287 -0.885524 0.27
slr0899 Forward -152 -133 9.14423 0.165
slr0907 Reverse -373 -392 10.3242 0.165
sll0891 Forward -360 -341 -3.3438 0.297
ssl1690 Forward -104 -85 -3.3438 0.297
slr0921 Reverse -279 -298 -3.3438 0.297
slr0575 Forward -280 -261 3.44104 0.237
ssr1407 Reverse -313 -332 2.16274 0.237
sll0830 Forward -64 -45 -2.65548 0.296
slr0838 Reverse -70 -89 -2.65548 0.296
sll0829 Forward -244 -225 -5.40875 0.298
slr0083 Reverse -347 -366 3.24438 0.237
sll0080 Reverse -368 -387 -1.67217 0.28
slr0505 Forward -264 -245 0.0977854 0.248
sll0482 Forward -198 -179 3.14605 0.237
sll0477 Forward -304 -285 -5.50708 0.298
sll0586 Forward -109 -90 1.47442 0.237
slr0623 Reverse -255 -274 1.47442 0.237
sll0585 Forward -391 -372 -5.50708 0.298
slr0624 Reverse -359 -378 -5.50708 0.298
slr0626 Reverse -369 -388 -4.91709 0.298
slr0300 Forward -122 -103 -2.55715 0.294
slr0788 Reverse -152 -171 2.3594 0.237
slr0788 Forward -162 -143 -5.21209 0.298
sll0794 Forward -197 -178 -5.40875 0.298
slr0698 Reverse -314 -333 -3.73712 0.298
sll0658 Reverse -168 -187 -5.11376 0.298
sll0739 Forward -394 -375 1.76941 0.237
sll0043 Reverse -335 -354 4.03102 0.237
sll0043 Forward -359 -340 -2.45882 0.293
slr0033 Reverse -265 -284 -0.4922 0.269
sll0499 Reverse -165 -184 3.53937 0.237
slr0544 Forward -263 -244 3.53937 0.237
ssl1707 Reverse -208 -227 -4.72043 0.298
sll0533 Forward -265 -246 0.786102 0.242
sll0533 Forward -322 -303 -5.31042 0.298
slr0549 Reverse -229 -248 0.786102 0.242
slr0549 Reverse -172 -191 -5.31042 0.298
sll1341 Forward -338 -319 0.392778 0.248
sll1341 Reverse -367 -386 -1.18052 0.27
sll1341 Forward -392 -373 -4.22878 0.298
slr1426 Reverse -217 -236 0.392778 0.248
slr1426 Forward -188 -169 -1.18052 0.27
slr1426 Reverse -163 -182 -4.22878 0.298
sll1330 Forward -28 -9 -4.72043 0.298
slr1461 Reverse -127 -146 0.196116 0.248
sll1363 Forward -87 -68 -4.32711 0.298
slr1659 Reverse -291 -310 -0.590531 0.269
slr0455 Forward -320 -301 -4.6221 0.298
sll1110 Forward -301 -282 -1.18052 0.27
slr0592 Reverse -322 -341 0.0977854 0.248
slr0594 Forward -174 -155 1.76941 0.237
slr0594 Reverse -330 -349 -5.21209 0.298
slr0594 Forward -354 -335 -5.50708 0.298
slr0596 Forward -221 -202 0.491109 0.248
slr0608 Reverse -22 -41 2.26107 0.237
sll5042 Forward -258 -239 -3.3438 0.297
ssl5065 Reverse -284 -303 -2.36049 0.288
slr5093 Forward -243 -224 -1.18052 0.27
sll5094 Reverse -18 -37 -1.37718 0.277
sll7070 Forward -275 -256 -2.55715 0.294
slr7099 Forward -281 -262 -4.72043 0.298
sll8012 Forward -208 -189 -3.04881 0.297
slr8014 Reverse -119 -138 -3.04881 0.297
slr6022 Forward -45 -26 -2.0655 0.28
slr6081 Forward -45 -26 -2.0655 0.28
slr6096 Forward -224 -205 1.27776 0.237
6803t07 Reverse -80 -99 -3.83545 0.298
6803t24 Forward -302 -283 3.04771 0.237
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.000 1.000 0.000
0.000 0.900 0.100 0.000
0.800 0.000 0.000 0.200
0.400 0.000 0.600 0.000
0.000 0.200 0.000 0.800
0.000 0.000 0.000 1.000
0.000 0.000 0.200 0.800
0.000 0.300 0.500 0.200
0.000 1.000 0.000 0.000
0.200 0.800 0.000 0.000
0.000 0.200 0.800 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.200 0.100 0.400 0.300
0.100 0.000 0.900 0.000
0.000 0.000 1.000 0.000
0.600 0.000 0.400 0.000
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000