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Details for NP_440707.1_9

Name NP_440707.1_9
Length 20
Regular expression G[TC][GC]GTGGA[GA][GC][AG][CGT]GTGAT[CGT][GC]A
Central Yes

Motif logo

Genes containing this motif

198 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1312 Reverse -238 -257 1.86774 0.286
sll1394 Forward -379 -360 -0.197208 0.299
slr0740 Reverse -288 -307 7.17762 0.232
slr0740 Forward -311 -292 2.65439 0.268
sll0226 Reverse -286 -305 -0.295539 0.299
ssr0390 Forward -252 -233 -0.39387 0.299
slr1416 Forward -378 -359 6.09597 0.235
slr1417 Reverse -81 -100 2.65439 0.268
slr1102 Forward -180 -161 0.0977854 0.293
slr1105 Forward -355 -336 2.94938 0.268
sll1031 Forward -259 -240 6.58763 0.235
sll1031 Forward -154 -135 1.0811 0.292
sll1030 Forward -83 -64 9.24257 0.202
sll1685 Forward -212 -193 -0.295539 0.299
slr1777 Forward -216 -197 2.85105 0.268
slr1293 Reverse -241 -260 0.491109 0.293
ssl2384 Forward -382 -363 -0.295539 0.299
ssl1792 Forward -129 -110 5.80098 0.235
sll0936 Reverse -186 -205 2.85105 0.268
slr0687 Forward -326 -307 1.47442 0.292
sll0640 Reverse -163 -182 2.0644 0.281
slr1594 Forward -257 -238 0.294447 0.293
sll1507 Reverse -106 -125 4.03102 0.259
slr1045 Forward -331 -312 1.0811 0.292
ssl1920 Forward -371 -352 0.786102 0.293
slr2041 Reverse -163 -182 17.3057 0.0544
ssr3465 Reverse -265 -284 7.66927 0.219
sll1937 Reverse -236 -255 3.83436 0.266
slr1907 Reverse -193 -212 4.42435 0.255
sll1831 Forward -178 -159 0.294447 0.293
sll0984 Reverse -123 -142 7.7676 0.219
sll0981 Reverse -234 -253 4.03102 0.259
sll1575 Reverse -293 -312 0.0977854 0.293
sll1926 Reverse -203 -222 -0.000545616 0.293
slr2023 Reverse -363 -382 1.86774 0.286
slr2024 Reverse -37 -56 4.32602 0.255
sll1082 Forward -239 -220 5.70265 0.235
sll1080 Forward -380 -361 4.03102 0.259
slr1146 Forward -248 -229 1.37609 0.292
slr1149 Reverse -236 -255 7.37428 0.232
sll1824 Forward -217 -198 1.67108 0.292
sll1819 Forward -152 -133 1.47442 0.292
sll1812 Forward -78 -59 1.76941 0.289
sll1805 Reverse -47 -66 3.24438 0.268
sll1801 Forward -259 -240 8.75091 0.219
slr1202 Forward -397 -378 2.26107 0.274
slr1203 Reverse -255 -274 5.89931 0.235
slr1205 Forward -146 -127 4.52268 0.255
slr1206 Forward -375 -356 21.5339 0.0245
sll1746 Forward -243 -224 1.27776 0.292
slr1827 Forward -275 -256 4.12936 0.259
sll1715 Forward -397 -378 -0.000545616 0.293
sll1714 Forward -63 -44 -0.000545616 0.293
sll1143 Forward -330 -311 -0.000545616 0.293
slr1444 Reverse -378 -397 2.75272 0.268
slr1444 Reverse -351 -370 0.0977854 0.293
ssr1480 Forward -346 -327 5.11266 0.255
slr0880 Forward -396 -377 5.50599 0.239
slr0880 Reverse -199 -218 2.16274 0.276
sll0869 Forward -279 -260 7.86593 0.219
ssl2598 Forward -352 -333 2.26107 0.274
slr1857 Forward -105 -86 5.60432 0.237
sll1768 Forward -198 -179 -0.0988766 0.299
sll1758 Reverse -336 -355 0.294447 0.293
slr1881 Forward -166 -147 0.294447 0.293
sll2002 Forward -377 -358 0.0977854 0.293
sll1697 Reverse -271 -290 11.8975 0.198
slr1811 Reverse -334 -353 1.17943 0.292
slr1820 Forward -391 -372 8.06259 0.219
slr1820 Forward -394 -375 0.491109 0.293
sll1687 Reverse -185 -204 -0.197208 0.299
sll0856 Forward -240 -221 4.32602 0.255
sll1158 Forward -233 -214 9.3409 0.202
sll1154 Reverse -11 -30 3.04771 0.268
slr1262 Forward -290 -271 3.14605 0.268
slr2003 Forward -392 -373 3.6377 0.267
ssr2912 Reverse -113 -132 6.09597 0.235
sll0252 Reverse -318 -337 8.45592 0.219
slr0263 Forward -314 -295 4.52268 0.255
slr0269 Reverse -320 -339 5.70265 0.235
ssl0453 Forward -185 -166 1.17943 0.292
slr2084 Forward -20 -1 1.86774 0.286
sll1987 Reverse -143 -162 3.24438 0.268
slr2087 Forward -61 -42 3.24438 0.268
slr2098 Forward -389 -370 0.58944 0.293
slr2099 Reverse -216 -235 9.63589 0.198
sll1426 Reverse -8 -27 0.294447 0.293
ssl2749 Forward -381 -362 -0.000545616 0.293
sll1218 Reverse -231 -250 6.68596 0.235
slr0806 Reverse -220 -239 6.19431 0.235
slr0808 Forward -92 -73 10.2259 0.198
sll0809 Reverse -350 -369 0.982764 0.292
sll1250 Forward -107 -88 1.17943 0.292
slr1966 Reverse -320 -339 1.47442 0.292
slr1968 Reverse -266 -285 8.16093 0.219
sll1890 Reverse -354 -373 5.89931 0.235
sll1868 Reverse -210 -229 1.86774 0.286
ssl2717 Forward -275 -256 5.01433 0.255
sll1167 Reverse -267 -286 0.491109 0.293
slr1287 Forward -296 -277 0.491109 0.293
slr1288 Forward -372 -353 3.24438 0.268
sll1446 Reverse -13 -32 5.70265 0.235
sll1440 Reverse -77 -96 -0.000545616 0.293
sll1095 Reverse -256 -275 2.45773 0.272
slr1168 Reverse -347 -366 10.4225 0.198
slr1171 Forward -229 -210 3.14605 0.268
slr1673 Forward -280 -261 1.17943 0.292
sll0914 Reverse -42 -61 0.294447 0.293
slr0944 Forward -172 -153 0.294447 0.293
slr0946 Forward -206 -187 11.1109 0.198
slr0952 Reverse -321 -340 0.982764 0.292
sll1541 Reverse -236 -255 4.71934 0.255
sll1541 Reverse -224 -243 4.62101 0.255
slr1647 Forward -348 -329 20.354 0.0245
sll0420 Forward -381 -362 -0.39387 0.299
sll0419 Reverse -363 -382 -0.39387 0.299
sll0257 Reverse -345 -364 2.65439 0.268
slr0394 Forward -278 -259 4.03102 0.259
slr0152 Forward -195 -176 -0.295539 0.299
sll0146 Forward -237 -218 7.96426 0.219
ssr3304 Forward -80 -61 1.27776 0.292
slr1943 Forward -309 -290 1.27776 0.292
slr1945 Forward -190 -171 2.75272 0.268
slr0990 Reverse -293 -312 0.0977854 0.293
slr0168 Forward -240 -221 2.3594 0.274
sll0168 Forward -115 -96 6.39097 0.235
slr0361 Forward -134 -115 3.04771 0.268
slr0378 Forward -396 -377 4.52268 0.255
slr0342 Reverse -298 -317 3.93269 0.263
sll0320 Reverse -69 -88 5.80098 0.235
sll0319 Reverse -343 -362 3.04771 0.268
slr0356 Forward -284 -265 14.6508 0.114
sll0409 Forward -190 -171 2.26107 0.274
slr0436 Forward -313 -294 17.109 0.0544
slr0436 Forward -301 -282 1.37609 0.292
sll0068 Forward -226 -207 0.392778 0.293
slr0055 Forward -297 -278 3.6377 0.267
sll0060 Forward -378 -359 0.294447 0.293
sll0058 Forward -362 -343 1.76941 0.289
slr0066 Forward -210 -191 5.01433 0.255
sll0053 Forward -134 -115 -0.295539 0.299
sll0051 Reverse -295 -314 0.982764 0.292
sml0002 Reverse -285 -304 0.58944 0.293
slr0495 Reverse -341 -360 4.52268 0.255
sll0687 Reverse -198 -217 0.0977854 0.293
slr0415 Forward -328 -309 4.42435 0.255
slr0416 Forward -131 -112 8.25926 0.219
sll0380 Forward -312 -293 0.884433 0.292
slr0426 Reverse -318 -337 -0.197208 0.299
slr0427 Forward -376 -357 0.0977854 0.293
sll0189 Reverse -356 -375 0.58944 0.293
sll0188 Reverse -329 -348 -0.000545616 0.293
sll0178 Forward -394 -375 3.24438 0.268
ssr1513 Reverse -379 -398 3.24438 0.268
slr0898 Forward -208 -189 1.0811 0.292
slr0838 Forward -166 -147 7.27595 0.232
sll0083 Forward -273 -254 20.354 0.0245
sll0078 Forward -81 -62 1.27776 0.292
slr0086 Reverse -91 -110 1.27776 0.292
slr0088 Forward -232 -213 6.98095 0.235
slr0089 Forward -397 -378 10.5209 0.198
sll0485 Forward -391 -372 4.81767 0.255
sll0481 Forward -122 -103 -0.000545616 0.293
slr0514 Forward -400 -381 3.44104 0.268
sll0474 Forward -209 -190 0.294447 0.293
sll0586 Forward -179 -160 3.6377 0.267
slr0623 Reverse -185 -204 3.6377 0.267
sll0584 Reverse -308 -327 9.73422 0.198
slr0110 Reverse -277 -296 6.39097 0.235
slr0110 Reverse -280 -299 4.52268 0.255
slr0115 Forward -271 -252 10.0292 0.198
slr0788 Forward -324 -305 2.16274 0.276
slr0793 Reverse -131 -150 8.06259 0.219
slr0793 Reverse -194 -213 2.75272 0.268
slr0031 Forward -266 -247 2.75272 0.268
sll0030 Forward -299 -280 2.94938 0.268
sll0508 Reverse -347 -366 5.11266 0.255
slr0554 Forward -319 -300 2.55606 0.27
slr1421 Forward -64 -45 0.786102 0.293
sll1340 Forward -312 -293 10.9142 0.198
sll1329 Reverse -341 -360 6.39097 0.235
sll1367 Forward -317 -298 2.65439 0.268
slr1464 Forward -234 -215 1.17943 0.292
ssr1114 Reverse -342 -361 2.3594 0.274
slr1564 Reverse -370 -389 0.884433 0.292
sll1482 Forward -341 -322 2.45773 0.272
slr0453 Reverse -214 -233 0.196116 0.293
slr1183 Reverse -221 -240 0.294447 0.293
slr1189 Forward -254 -235 10.6192 0.198
slr0593 Reverse -167 -186 1.37609 0.292
slr0598 Forward -139 -120 2.55606 0.27
slr0598 Forward -359 -340 -0.197208 0.299
ssr5020 Forward -152 -133 -0.000545616 0.293
slr5038 Forward -69 -50 0.0977854 0.293
ssl5068 Reverse -107 -126 12.6841 0.193
sll5097 Forward -127 -108 0.884433 0.292
ssl5108 Reverse -86 -105 2.94938 0.268
ssl7039 Reverse -205 -224 6.09597 0.235
slr7041 Forward -155 -136 6.09597 0.235
sll8001 Forward -349 -330 1.27776 0.292
sll8031 Reverse -163 -182 9.63589 0.198
slr6028 Reverse -23 -42 -0.39387 0.299
slr6047 Forward -66 -47 0.884433 0.292
ssr6048 Forward -89 -70 0.982764 0.292
slr6049 Forward -303 -284 0.982764 0.292
slr6087 Reverse -23 -42 -0.39387 0.299
ssl6092 Reverse -171 -190 4.52268 0.255
6803t35 Forward -313 -294 0.786102 0.293
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.100  0.900  0.000  
0.000 0.300 0.000 0.700
0.000 0.300 0.600 0.100
0.000 0.000 1.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.900 0.000 0.100 0.000
0.200 0.000 0.800 0.000
0.000 0.300 0.700 0.000
0.700 0.100 0.200 0.000
0.100 0.300 0.300 0.300
0.000 0.000 0.900 0.100
0.000 0.000 0.000 1.000
0.000 0.100 0.900 0.000
0.900 0.000 0.100 0.000
0.000 0.000 0.100 0.900
0.000 0.600 0.200 0.200
0.000 0.200 0.800 0.000
0.900 0.000 0.100 0.000