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Details for NP_440696.1_6

Name NP_440696.1_6
Length 20
Regular expression G[GT]TC[TA]G[TAG]T[CG][AT][TG]GG[CG]CGA[TG][GC][CG]
Central No

Motif logo

Genes containing this motif

278 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1406 Reverse -68 -87 3.34271 0.288
slr1122 Forward -260 -241 3.14605 0.288
sll0712 Reverse -128 -147 6.4893 0.266
sll0703 Reverse -12 -31 4.62101 0.285
ssl1326 Forward -359 -340 5.80098 0.266
slr0741 Reverse -203 -222 3.83436 0.288
slr0742 Forward -63 -44 8.94757 0.231
slr0742 Reverse -213 -232 7.66927 0.249
slr0743a Reverse -248 -267 4.32602 0.288
slr0250 Forward -216 -197 10.7175 0.207
sll0223 Reverse -89 -108 10.4225 0.207
slr1411 Forward -140 -121 3.93269 0.288
sll1325 Forward -98 -79 2.94938 0.296
sll1323 Forward -315 -296 3.83436 0.288
slr1105 Forward -361 -342 9.73422 0.226
sll1027 Reverse -174 -193 4.916 0.285
slr1109 Forward -105 -86 4.916 0.285
sll1682 Reverse -258 -277 5.70265 0.266
ssr2998 Forward -87 -68 10.4225 0.207
ssr2998 Forward -225 -206 4.52268 0.288
sll1655 Reverse -283 -302 10.9142 0.207
sll1655 Forward -36 -17 3.73603 0.288
sll1655 Forward -30 -11 3.24438 0.288
sll1192 Forward -365 -346 5.11266 0.282
ssr2153 Reverse -270 -289 5.11266 0.282
sll1189 Forward -35 -16 3.53937 0.288
slr1305 Reverse -333 -352 4.32602 0.288
slr1305 Reverse -196 -215 3.53937 0.288
sll0939 Forward -137 -118 3.24438 0.288
slr0969 Forward -94 -75 5.30933 0.277
slr0981 Forward -178 -159 4.52268 0.288
slr1610 Forward -233 -214 3.24438 0.288
slr1611 Reverse -152 -171 8.75091 0.231
ssr1765 Forward -243 -224 3.04771 0.292
sll0654 Forward -80 -61 8.16093 0.231
slr0676 Reverse -247 -266 8.16093 0.231
slr0679 Reverse -96 -115 4.42435 0.288
slr0682 Reverse -286 -305 3.53937 0.288
slr1590 Forward -187 -168 4.52268 0.288
slr1594 Forward -263 -244 15.2408 0.157
slr1604 Reverse -288 -307 5.30933 0.277
sll1502 Reverse -191 -210 4.03102 0.288
ssr2708 Forward -31 -12 4.03102 0.288
sll1501 Forward -386 -367 11.0125 0.207
slr1755 Reverse -278 -297 3.6377 0.288
ssr2962 Forward -307 -288 9.3409 0.226
sll1636 Reverse -222 -241 8.16093 0.231
slr1770 Forward -71 -52 8.16093 0.231
sml0005 Reverse -275 -294 3.73603 0.288
sll1752 Reverse -175 -194 3.44104 0.288
ssr3122 Forward -95 -76 3.44104 0.288
sll1940 Forward -356 -337 3.73603 0.288
ssr3465 Reverse -357 -376 3.73603 0.288
ssr3467 Forward -261 -242 5.30933 0.277
sll1934 Reverse -54 -73 10.6192 0.207
slr2053 Forward -78 -59 10.6192 0.207
slr1918 Forward -269 -250 17.994 0.109
sll0996 Reverse -380 -399 7.27595 0.259
sll0985 Forward -243 -224 5.211 0.279
slr1037 Reverse -187 -206 5.211 0.279
sll0983 Forward -267 -248 3.53937 0.288
slr1039 Forward -226 -207 9.0459 0.229
sll1290 Forward -169 -150 3.04771 0.292
sll1568 Forward -259 -240 8.16093 0.231
sll1927 Reverse -205 -224 3.83436 0.288
sll1926 Forward -179 -160 11.2092 0.207
sll1925 Forward -48 -29 6.58763 0.266
slr2006 Reverse -167 -186 6.58763 0.266
slr2008 Reverse -193 -212 5.89931 0.266
slr2026 Reverse -236 -255 4.81767 0.285
slr2027 Forward -93 -74 5.50599 0.275
slr1145 Forward -223 -204 11.1109 0.207
sll1071 Reverse -136 -155 6.88262 0.266
sll1824 Reverse -84 -103 2.94938 0.296
sll1812 Reverse -217 -236 3.34271 0.288
ssl3432 Forward -166 -147 9.0459 0.229
sll1796 Reverse -228 -247 5.40766 0.276
sll1120 Forward -324 -305 6.4893 0.266
sll1118 Forward -356 -337 3.04771 0.292
slr1198 Reverse -162 -181 3.04771 0.292
slr1215 Reverse -315 -334 7.27595 0.259
sll1971 Forward -332 -313 6.29264 0.266
slr2077 Forward -263 -244 7.7676 0.249
slr2078 Forward -377 -358 4.12936 0.288
sll1743 Reverse -381 -400 4.42435 0.288
sll1739 Reverse -31 -50 7.17762 0.264
slr1830 Forward -38 -19 3.83436 0.288
slr1540 Forward -137 -118 6.78429 0.266
slr1223 Forward -259 -240 12.5858 0.207
slr1225 Reverse -200 -219 5.70265 0.266
sll1132 Reverse -318 -337 3.24438 0.288
slr1237 Forward -321 -302 3.24438 0.288
sll1129 Forward -376 -357 10.4225 0.207
ssr2061 Reverse -29 -48 10.4225 0.207
slr1238 Reverse -376 -395 10.4225 0.207
sll1362 Reverse -278 -297 10.1275 0.212
slr1444 Reverse -230 -249 15.0441 0.157
slr1449 Reverse -61 -80 6.19431 0.266
sll1282 Forward -230 -211 8.75091 0.231
sll0872 Reverse -151 -170 2.94938 0.296
slr0891 Reverse -207 -226 5.99764 0.266
sll0861 Forward -358 -339 6.4893 0.266
slr1407 Reverse -308 -327 13.2741 0.207
sll1764 Forward -101 -82 3.73603 0.288
slr1882 Forward -277 -258 4.42435 0.288
slr1888 Forward -126 -107 9.3409 0.226
sll2015 Forward -160 -141 4.71934 0.285
sll2006 Forward -238 -219 3.83436 0.288
sll1710 Reverse -262 -281 5.40766 0.276
sll1698 Forward -76 -57 5.30933 0.277
sll1694 Forward -87 -68 4.71934 0.285
slr1735 Forward -230 -211 3.6377 0.288
sll1625 Forward -187 -168 4.22769 0.288
sll1621 Reverse -215 -234 4.62101 0.285
slr1738 Forward -96 -77 4.62101 0.285
slr1742 Forward -239 -220 11.5042 0.207
slr1742 Forward -257 -238 10.3242 0.207
sll0858 Forward -123 -104 3.93269 0.288
slr0864 Forward -205 -186 25.5655 0.00952
sll1159 Reverse -319 -338 5.89931 0.266
slr1245 Forward -250 -231 5.89931 0.266
slr1253 Reverse -193 -212 23.5006 0.0205
slr1256 Forward -288 -269 3.24438 0.288
slr1260 Forward -379 -360 3.14605 0.288
slr1998 Reverse -294 -313 4.32602 0.288
slr1999 Reverse -363 -382 8.35759 0.231
slr2000 Reverse -111 -130 4.03102 0.288
slr1719 Forward -334 -315 18.289 0.109
slr1720 Reverse -271 -290 4.81767 0.285
ssr2898 Forward -212 -193 9.24257 0.226
slr1731 Reverse -247 -266 6.98095 0.266
slr0261 Reverse -308 -327 3.93269 0.288
sll0250 Reverse -70 -89 4.916 0.285
slr0269 Forward -266 -247 6.29264 0.266
slr0269 Forward -199 -180 4.12936 0.288
ssl0453 Reverse -193 -212 11.3075 0.207
slr0272 Forward -316 -297 11.8975 0.207
slr2083 Forward -291 -272 10.3242 0.207
sll1973 Forward -247 -228 4.71934 0.285
sll1423 Forward -294 -275 7.47261 0.255
slr1506 Reverse -141 -160 7.47261 0.255
sll1415 Reverse -344 -363 6.58763 0.266
slr1517 Forward -144 -125 12.1925 0.207
slr2108 Forward -23 -4 5.70265 0.266
slr2121 Reverse -81 -100 5.70265 0.266
slr2128 Reverse -42 -61 3.14605 0.288
sll1250 Forward -298 -279 3.14605 0.288
slr1347 Forward -308 -289 4.32602 0.288
sll1892 Reverse -198 -217 5.70265 0.266
sll1872 Reverse -55 -74 4.81767 0.285
sll1369 Forward -77 -58 4.12936 0.288
sll1182 Reverse -289 -308 3.93269 0.288
slr1279 Forward -332 -313 6.09597 0.266
sll1097 Reverse -307 -326 9.24257 0.226
slr1173 Forward -263 -244 5.01433 0.285
slr1676 Forward -361 -342 4.71934 0.285
ssr2799 Reverse -198 -217 3.34271 0.288
ssr2802 Forward -370 -351 8.25926 0.231
sll0916 Forward -117 -98 6.78429 0.266
slr0940 Forward -274 -255 4.42435 0.288
sll0912 Forward -275 -256 9.43923 0.226
slr0949 Reverse -11 -30 9.43923 0.226
ssr2723 Forward -268 -249 5.40766 0.276
slr1643 Reverse -71 -90 3.44104 0.288
sll1521 Forward -277 -258 4.71934 0.285
sll0426 Reverse -313 -332 4.81767 0.285
sll0421 Reverse -163 -182 3.73603 0.288
sll0420 Forward -386 -367 5.70265 0.266
sll0420 Forward -47 -28 4.62101 0.285
sll0257 Forward -242 -223 5.80098 0.266
slr0394 Forward -275 -256 7.37428 0.259
slr0147 Forward -155 -136 10.5209 0.207
slr0164 Reverse -3 -22 12.6841 0.207
slr0165 Reverse -172 -191 4.71934 0.285
slr0320 Forward -340 -321 8.65258 0.231
sll0300 Reverse -35 -54 11.7008 0.207
sll0162 Reverse -356 -375 9.3409 0.226
slr0362 Forward -227 -208 4.03102 0.288
slr0370 Forward -28 -9 10.3242 0.207
slr0769 Forward -319 -300 4.71934 0.285
slr1003 Reverse -339 -358 11.0125 0.207
sll0761 Forward -92 -73 7.66927 0.249
sll0757 Reverse -295 -314 5.50599 0.275
slr0780 Forward -225 -206 5.50599 0.275
ssl1417 Forward -321 -302 3.83436 0.288
sll0018 Reverse -329 -348 7.07928 0.266
sll0005 Forward -373 -354 2.94938 0.296
slr0213 Reverse -26 -45 4.62101 0.285
ssr0349 Reverse -187 -206 3.24438 0.288
sll0195 Forward -189 -170 11.0125 0.207
slr0431 Reverse -323 -342 10.0292 0.215
ssl0787 Reverse -339 -358 15.6341 0.157
sll0410 Reverse -310 -329 3.24438 0.288
slr0440 Forward -107 -88 3.14605 0.288
sll0071 Forward -171 -152 9.24257 0.226
sll0053 Forward -94 -75 5.89931 0.266
sll0053 Forward -128 -109 4.12936 0.288
slr0069 Reverse -24 -43 5.89931 0.266
slr0479 Forward -323 -304 3.44104 0.288
sll0684 Reverse -57 -76 6.4893 0.266
sll0683 Forward -360 -341 9.43923 0.226
slr0635 Forward -383 -364 3.14605 0.288
sll0611 Forward -353 -334 8.55425 0.231
sll0603 Reverse -296 -315 10.1275 0.212
sll0396 Forward -279 -260 3.34271 0.288
sll0384 Forward -107 -88 3.24438 0.288
sll0383 Forward -399 -380 5.70265 0.266
sll0382 Forward -332 -313 3.34271 0.288
sll0373 Forward -160 -141 8.65258 0.231
sll0189 Reverse -359 -378 14.0608 0.194
slr0193 Reverse -331 -350 3.14605 0.288
slr0901 Forward -116 -97 3.44104 0.288
slr0905 Forward -236 -217 8.65258 0.231
slr0906 Forward -295 -276 5.01433 0.285
slr0923 Reverse -120 -139 17.6007 0.109
slr0923 Forward -78 -59 8.16093 0.231
sll0555 Forward -148 -129 3.34271 0.288
slr0825 Reverse -305 -324 3.53937 0.288
sll0830 Forward -361 -342 8.06259 0.235
sll0829 Forward -363 -344 8.25926 0.231
sll0822 Reverse -361 -380 5.11266 0.282
sll0086 Reverse -150 -169 4.12936 0.288
slr0088 Forward -298 -279 7.86593 0.246
slr0503 Reverse -40 -59 10.5209 0.207
slr0503 Reverse -146 -165 9.24257 0.226
slr0509 Reverse -339 -358 4.12936 0.288
sll0474 Forward -288 -269 7.07928 0.266
slr0518 Forward -327 -308 5.80098 0.266
sll0467 Forward -206 -187 14.1591 0.194
sll0594 Forward -110 -91 3.93269 0.288
sll0590 Reverse -235 -254 10.8159 0.207
slr0103 Forward -182 -163 5.80098 0.266
sll0103 Forward -283 -264 3.73603 0.288
sll0282 Reverse -293 -312 7.27595 0.259
slr0312 Reverse -65 -84 8.55425 0.231
sll0797 Reverse -22 -41 5.99764 0.266
slr0793 Forward -97 -78 5.99764 0.266
sll0785 Reverse -135 -154 12.1925 0.207
slr0712 Forward -302 -283 7.57094 0.253
slr0032 Forward -164 -145 7.66927 0.249
slr0033 Reverse -339 -358 6.29264 0.266
slr0543 Forward -301 -282 8.16093 0.231
sll0495 Reverse -163 -182 3.44104 0.288
sll0493 Forward -199 -180 10.8159 0.207
slr0926 Reverse -317 -336 3.24438 0.288
slr0554 Forward -292 -273 3.53937 0.288
slr1463 Reverse -120 -139 5.40766 0.276
sll0630 Forward -356 -337 4.22769 0.288
slr1562 Forward -113 -94 3.73603 0.288
slr1653 Forward -321 -302 12.6841 0.207
sll1549 Forward -174 -155 4.03102 0.288
slr1655 Reverse -331 -350 4.03102 0.288
ssr2781 Reverse -120 -139 11.7008 0.207
sll0445 Reverse -72 -91 3.14605 0.288
sll0441 Forward -101 -82 6.09597 0.266
slr0452 Reverse -31 -50 6.09597 0.266
slr1183 Forward -211 -192 3.83436 0.288
slr0597 Forward -70 -51 5.211 0.279
slr0600 Reverse -337 -356 15.3391 0.157
sll5047 Reverse -360 -379 16.5191 0.142
ssl5068 Reverse -136 -155 6.39097 0.266
sll5089 Reverse -114 -133 6.78429 0.266
ssl5095 Reverse -244 -263 3.53937 0.288
ssl5099 Reverse -317 -336 3.34271 0.288
slr5101 Forward -258 -239 3.34271 0.288
sll5104 Forward -176 -157 5.89931 0.266
slr5105 Reverse -214 -233 5.89931 0.266
slr7014 Reverse -249 -268 17.994 0.109
ssr7036 Reverse -371 -390 8.65258 0.231
ssl7074 Reverse -105 -124 10.5209 0.207
slr7083 Forward -197 -178 6.39097 0.266
ssr7084 Reverse -310 -329 4.81767 0.285
slr7096 Reverse -112 -131 9.14423 0.229
sll8009 Reverse -256 -275 6.19431 0.266
slr6005 Reverse -141 -160 6.78429 0.266
ssr6032 Reverse -230 -249 3.93269 0.288
slr6033 Reverse -249 -268 3.93269 0.288
sll6036 Reverse -214 -233 5.89931 0.266
slr6037 Forward -180 -161 5.89931 0.266
ssr6048 Forward -102 -83 3.53937 0.288
slr6049 Forward -316 -297 3.53937 0.288
sll6060 Reverse -101 -120 3.24438 0.288
slr6064 Reverse -141 -160 6.78429 0.266
slr6091 Reverse -249 -268 3.93269 0.288
ssl6092 Forward -61 -42 6.58763 0.266
6803t28 Reverse -161 -180 11.0125 0.207
6803t31 Forward -200 -181 4.62101 0.285
6803t37 Forward -30 -11 3.44104 0.288
6803t37 Forward -237 -218 3.14605 0.288
6803t38 Forward -120 -101 3.44104 0.288
6803t38 Forward -327 -308 3.14605 0.288
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.125  0.750  0.125  
0.000 0.000 0.750 0.250
0.000 0.125 0.125 0.750
0.000 0.875 0.125 0.000
0.250 0.000 0.000 0.750
0.000 0.000 1.000 0.000
0.250 0.125 0.250 0.375
0.000 0.125 0.000 0.875
0.000 0.625 0.250 0.125
0.500 0.000 0.125 0.375
0.125 0.000 0.250 0.625
0.125 0.000 0.875 0.000
0.000 0.000 1.000 0.000
0.000 0.750 0.250 0.000
0.000 0.750 0.125 0.125
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.250 0.750
0.000 0.250 0.750 0.000
0.000 0.500 0.500 0.000