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Details for NP_440665.1_2

Name NP_440665.1_2
Length 20
Regular expression AC[CT]CC[TC]TGGGG[CT]AAACCC[GA]C
Central No

Motif logo

Genes containing this motif

114 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Reverse -141 -160 -7.27704 0.298
sll0223 Forward -56 -37 -4.03212 0.246
sll1327 Reverse -241 -260 2.26107 0.183
slr1109 Reverse -273 -292 -6.29373 0.265
ssr2972 Forward -44 -25 -5.70374 0.247
slr1773 Forward -239 -220 -5.70374 0.247
slr1783 Forward -293 -274 -5.99873 0.252
sll1667 Reverse -183 -202 -5.01543 0.247
sll0939 Reverse -362 -381 -4.32711 0.246
slr0976 Forward -63 -44 -5.40875 0.247
slr1077 Forward -262 -243 -5.70374 0.247
sll0656 Reverse -198 -217 -3.93378 0.246
slr2049 Forward -222 -203 1.57275 0.188
sll1837 Forward -71 -52 -4.52377 0.246
slr1912 Reverse -194 -213 -4.52377 0.246
sll1831 Forward -327 -308 -7.08038 0.298
sll1285 Reverse -278 -297 -5.40875 0.247
slr2009 Reverse -174 -193 -7.27704 0.298
slr1139 Forward -139 -120 -6.98204 0.294
sll1820 Forward -347 -328 -6.98204 0.294
sll1814 Forward -170 -151 -5.40875 0.247
ssl3432 Forward -122 -103 28.6138 0.00035
slr1200 Reverse -196 -215 -5.60541 0.247
sll1112 Reverse -257 -276 -1.7705 0.211
slr1216 Forward -252 -233 -1.7705 0.211
sll1281 Forward -21 -2 -1.27885 0.208
sll0876 Reverse -223 -242 5.89931 0.0984
sll1758 Forward -92 -73 -4.72043 0.246
ssr3184 Reverse -76 -95 -4.72043 0.246
sll2014 Reverse -238 -257 1.17943 0.188
sll1702 Reverse -68 -87 -5.31042 0.247
sll1688 Forward -185 -166 8.25926 0.0715
slr1820 Reverse -190 -209 8.25926 0.0715
slr1746 Reverse -361 -380 -4.72043 0.246
sll0846 Reverse -92 -111 -1.96717 0.211
slr0862 Forward -98 -79 -1.96717 0.211
sll0839 Reverse -193 -212 -4.6221 0.246
sll1159 Forward -335 -316 -3.83545 0.246
slr1245 Reverse -234 -253 -3.83545 0.246
slr1255 Forward -74 -55 -4.72043 0.246
slr2059 Reverse -244 -263 -3.54046 0.246
slr2060 Reverse -150 -169 -5.70374 0.247
sll0252 Forward -97 -78 -4.52377 0.246
slr0261 Reverse -125 -144 -4.52377 0.246
ssr3532 Forward -341 -322 -5.60541 0.247
slr2103 Forward -234 -215 -5.40875 0.247
slr1508 Forward -367 -348 3.04771 0.18
slr1324 Reverse -350 -369 5.50599 0.0984
slr0813 Reverse -61 -80 -3.63879 0.246
slr1344 Forward -272 -253 -6.78538 0.29
sll1871 Reverse -60 -79 -3.44213 0.246
slr1982 Forward -124 -105 -3.44213 0.246
slr1470 Reverse -69 -88 -0.787193 0.208
sll1384 Forward -334 -315 -5.70374 0.247
slr1273 Forward -77 -58 -3.83545 0.246
slr1288 Forward -290 -271 -4.03212 0.246
ssr1951 Reverse -107 -126 0.687771 0.188
slr1174 Reverse -348 -367 0.687771 0.188
slr1174 Forward -189 -170 -6.29373 0.265
sll0912 Forward -97 -78 -6.49039 0.272
slr0949 Reverse -189 -208 -6.49039 0.272
sll0270 Reverse -194 -213 -4.32711 0.246
sll0268 Forward -221 -202 -6.78538 0.29
slr0399 Reverse -243 -262 -6.88371 0.292
slr0407 Forward -165 -146 -3.73712 0.246
slr0145 Forward -133 -114 4.03102 0.155
sll0144 Reverse -334 -353 -0.688862 0.208
slr0164 Reverse -110 -129 -2.0655 0.211
sll1865 Forward -204 -185 -5.01543 0.247
slr1927 Forward -105 -86 8.45592 0.0715
ssl1807 Reverse -18 -37 -6.29373 0.265
sll0298 Forward -77 -58 -4.91709 0.247
slr0361 Reverse -46 -65 -5.9004 0.247
slr0380 Forward -195 -176 -5.9004 0.247
ssl1426 Reverse -101 -120 2.94938 0.18
sll0752 Reverse -111 -130 13.8641 0.0509
slr0018 Reverse -304 -323 -7.27704 0.298
slr0232 Forward -196 -177 -3.04881 0.244
sll0401 Reverse -362 -381 0.687771 0.188
sll0400 Reverse -207 -226 -7.17871 0.298
slr0440 Forward -389 -370 0.687771 0.188
sll0063 Forward -309 -290 1.37609 0.188
slr0058 Reverse -235 -254 1.37609 0.188
sll0459 Reverse -351 -370 3.14605 0.18
sll0398 Reverse -267 -286 6.68596 0.0922
slr0194 Forward -280 -261 -7.27704 0.298
slr0912 Forward -336 -317 9.3409 0.0715
slr0582 Reverse -91 -110 10.7175 0.0715
slr0836 Forward -219 -200 -5.31042 0.247
ssl1552 Reverse -229 -248 -1.27885 0.208
slr0842 Forward -170 -151 -5.80207 0.247
slr0093 Reverse -30 -49 -6.1954 0.265
slr0521 Reverse -345 -364 -6.88371 0.292
sll0471 Reverse -204 -223 -5.31042 0.247
sll0107 Reverse -36 -55 -5.9004 0.247
slr0103 Forward -340 -321 -4.22878 0.246
slr0103 Forward -84 -65 -5.9004 0.247
slr0319 Reverse -212 -231 -3.04881 0.244
sll0738 Forward -208 -189 -5.60541 0.247
sll0514 Forward -245 -226 2.26107 0.183
sll0514 Reverse -16 -35 -5.80207 0.247
slr0529 Reverse -195 -214 2.26107 0.183
slr0542 Reverse -345 -364 -5.80207 0.247
sll0529 Reverse -49 -68 -2.55715 0.229
slr0556 Forward -392 -373 -1.08219 0.208
slr1461 Forward -288 -269 -5.60541 0.247
slr1560 Forward -355 -336 -5.31042 0.247
slr0593 Forward -33 -14 -0.590531 0.208
slr0605 Reverse -146 -165 -5.40875 0.247
sll5094 Reverse -184 -203 5.70265 0.0984
ssl5108 Reverse -124 -143 -4.6221 0.246
sll7063 Forward -217 -198 -6.49039 0.272
sll7086 Forward -176 -157 -7.17871 0.298
slr7101 Forward -138 -119 -0.295539 0.208
ssr6046 Reverse -182 -201 -5.9004 0.247
6803t17 Forward -349 -330 -3.3438 0.246
6803t19 Reverse -113 -132 -1.27885 0.208
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.955  0.000  0.000  0.045  
0.000 1.000 0.000 0.000
0.000 0.455 0.182 0.364
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.273 0.045 0.682
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.500 0.000 0.500
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
0.818 0.000 0.182 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.182 0.591 0.045 0.182
0.227 0.000 0.773 0.000
0.000 1.000 0.000 0.000