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Details for NP_440607.1_8

Name NP_440607.1_8
Length 20
Regular expression TC[GAT]G[GT][GA][TG]TGGCG[GC][CT][GA][CG]TG[AG][AC]
Central Yes

Motif logo

Genes containing this motif

124 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1115 Forward -254 -235 -0.4922 0.289
slr0725 Forward -277 -258 0.786102 0.28
sll0698 Reverse -227 -246 5.40766 0.209
slr0743 Reverse -203 -222 3.34271 0.229
sll0223 Reverse -179 -198 4.71934 0.209
ssl2615 Forward -350 -331 -1.08219 0.299
sll1322 Forward -236 -217 2.0644 0.264
sll1682 Reverse -246 -265 -0.0988766 0.28
slr1780 Reverse -373 -392 -0.39387 0.289
slr1780 Reverse -254 -273 -0.4922 0.289
sll1671 Forward -196 -177 8.75091 0.153
slr1790 Reverse -146 -165 8.75091 0.153
slr1293 Reverse -353 -372 1.0811 0.273
ssl2384 Forward -391 -372 10.0292 0.148
slr0687 Reverse -322 -341 6.68596 0.196
sll0634 Reverse -358 -377 0.294447 0.28
ssl1922 Reverse -151 -170 2.3594 0.261
slr2033 Reverse -365 -384 8.55425 0.153
slr2033 Reverse -371 -390 0.392778 0.28
slr2035 Forward -177 -158 3.34271 0.229
slr2044 Forward -76 -57 -0.983855 0.296
ssr1698 Reverse -276 -295 2.3594 0.261
ssr2317 Reverse -225 -244 8.25926 0.153
sll1296 Reverse -14 -33 11.5042 0.127
sll1283 Forward -199 -180 6.88262 0.191
slr1703 Reverse -182 -201 3.93269 0.216
ssr3409 Reverse -117 -136 0.786102 0.28
ssl3615 Reverse -273 -292 -0.688862 0.289
sll1823 Forward -101 -82 3.53937 0.229
sll1809 Reverse -144 -163 2.0644 0.264
sll1786 Reverse -284 -303 7.66927 0.169
slr1435 Forward -390 -371 -0.0988766 0.28
sll0876 Reverse -142 -161 1.17943 0.273
sll1307 Forward -190 -171 1.37609 0.268
slr1876 Forward -139 -120 0.196116 0.28
sll1765 Forward -304 -285 -0.885524 0.292
slr1880 Forward -306 -287 6.39097 0.206
sml0007 Forward -181 -162 -0.787193 0.289
sll1704 Forward -341 -322 5.30933 0.209
sll1692 Forward -67 -48 10.4225 0.141
sll1687 Reverse -137 -156 0.786102 0.28
slr0853 Forward -237 -218 7.7676 0.169
slr1262 Forward -239 -220 0.884433 0.28
slr1729 Reverse -334 -353 0.196116 0.28
ssr2912 Forward -276 -257 4.12936 0.209
ssl0461 Forward -235 -216 1.0811 0.273
slr2105 Forward -318 -299 7.27595 0.182
slr1522 Reverse -188 -207 1.86774 0.264
sll1232 Forward -278 -259 0.196116 0.28
sll1221 Forward -118 -99 0.392778 0.28
ssr1375 Forward -258 -239 0.687771 0.28
ssl3573 Reverse -363 -382 1.47442 0.264
slr1969 Forward -301 -282 1.47442 0.264
sll1167 Reverse -271 -290 -0.787193 0.289
slr1287 Forward -292 -273 -0.787193 0.289
slr1288 Reverse -7 -26 5.30933 0.209
sll1444 Reverse -189 -208 0.294447 0.28
sll1089 Reverse -140 -159 8.55425 0.153
ssr1951 Reverse -182 -201 12.7825 0.101
slr1691 Forward -54 -35 15.6341 0.0614
sll0915 Reverse -182 -201 -0.000545616 0.28
slr0954 Reverse -80 -99 -0.590531 0.289
slr1647 Forward -381 -362 -0.688862 0.289
sll1521 Forward -283 -264 -0.688862 0.289
sll0428 Reverse -64 -83 5.11266 0.209
sll0145 Reverse -282 -301 9.53756 0.15
slr1926 Reverse -286 -305 2.75272 0.245
sll1849 Forward -367 -348 5.211 0.209
slr0362 Forward -173 -154 13.3725 0.0999
slr0366 Reverse -262 -281 1.67108 0.264
slr0378 Forward -399 -380 2.0644 0.264
sll0772 Forward -274 -255 -0.0988766 0.28
slr0774 Reverse -358 -377 1.47442 0.264
sll0759 Reverse -212 -231 -0.197208 0.283
ssl1417 Forward -230 -211 -0.295539 0.287
slr0001 Reverse -292 -311 0.491109 0.28
slr0011 Forward -148 -129 6.88262 0.191
sll0204 Forward -285 -266 26.5488 0.00417
sll0198 Forward -398 -379 0.0977854 0.28
sll0062 Reverse -190 -209 4.22769 0.209
sll0051 Reverse -292 -311 1.86774 0.264
sll0614 Reverse -80 -99 -0.590531 0.289
slr0423 Forward -37 -18 1.76941 0.264
sll0189 Reverse -233 -252 4.12936 0.209
slr0196 Reverse -121 -140 -0.4922 0.289
slr0924 Forward -21 -2 1.76941 0.264
sll0542 Forward -322 -303 -0.4922 0.289
slr0582 Forward -286 -267 0.196116 0.28
slr0825 Forward -282 -263 -0.688862 0.289
sll0833 Forward -388 -369 4.32602 0.209
slr0509 Forward -280 -261 17.404 0.041
sll0469 Reverse -381 -400 0.491109 0.28
ssr1038 Forward -395 -376 2.94938 0.24
slr0795 Forward -313 -294 8.25926 0.153
slr0698 Forward -258 -239 -0.983855 0.296
slr0033 Forward -134 -115 8.94757 0.153
slr0044 Reverse -242 -261 0.392778 0.28
slr0535 Reverse -374 -393 -0.787193 0.289
slr0926 Forward -64 -45 4.52268 0.209
ssr1562 Reverse -255 -274 -0.0988766 0.28
sll1367 Forward -320 -301 1.96607 0.264
slr1455 Forward -236 -217 4.81767 0.209
slr1562 Forward -112 -93 10.9142 0.135
slr1562 Reverse -277 -296 0.196116 0.28
slr0755 Forward -145 -126 17.404 0.041
slr1651 Reverse -285 -304 3.24438 0.229
slr0597 Reverse -33 -52 4.81767 0.209
slr0598 Forward -130 -111 21.5339 0.0135
slr0602 Reverse -5 -24 9.63589 0.15
slr0608 Reverse -187 -206 1.57275 0.264
sll5002 Forward -131 -112 -0.885524 0.292
sll5044 Forward -323 -304 4.32602 0.209
ssl5045 Forward -114 -95 4.32602 0.209
sll5062 Forward -185 -166 5.60432 0.209
sll5107 Forward -288 -269 -1.08219 0.299
sll7003 Forward -172 -153 3.24438 0.229
sll7003 Forward -224 -205 0.0977854 0.28
slr7005 Reverse -348 -367 0.0977854 0.28
ssr7018 Forward -226 -207 0.196116 0.28
ssl7039 Reverse -205 -224 4.22769 0.209
slr7041 Forward -155 -136 4.22769 0.209
sll7063 Forward -213 -194 -0.688862 0.289
sll7090 Reverse -295 -314 5.11266 0.209
slr7092 Forward -194 -175 5.11266 0.209
slr7095 Reverse -56 -75 -0.197208 0.283
slr6034 Forward -234 -215 -1.08219 0.299
slr6097 Forward -118 -99 0.196116 0.28
slr6108 Reverse -270 -289 1.0811 0.273
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 1.000 0.000 0.000
0.250 0.000 0.500 0.250
0.000 0.000 1.000 0.000
0.000 0.000 0.750 0.250
0.250 0.000 0.750 0.000
0.000 0.000 0.250 0.750
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.125 0.000 0.750 0.125
0.000 0.250 0.625 0.125
0.000 0.500 0.000 0.500
0.250 0.000 0.750 0.000
0.000 0.750 0.250 0.000
0.000 0.000 0.000 1.000
0.125 0.000 0.875 0.000
0.750 0.000 0.250 0.000
0.750 0.250 0.000 0.000