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Details for NP_440562.1_10

Name NP_440562.1_10
Length 19
Regular expression T[GT][CAG][CT]AA[CAG][CT][AT]G[CT]C[GA]A[TA]C[AG][CG]C
Central Yes

Motif logo

Genes containing this motif

159 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1060 Forward -369 -351 6.41066 0.284
ssl2069 Forward -182 -164 6.41066 0.284
ssr1853 Reverse -87 -105 6.41066 0.284
sll1052 Reverse -239 -257 7.00065 0.284
slr0727 Forward -350 -332 6.70565 0.284
slr0743a Reverse -382 -400 12.3105 0.206
slr0743a Reverse -130 -148 7.19731 0.284
slr1414 Forward -102 -84 6.214 0.284
slr1100 Reverse -342 -360 14.6705 0.164
sll1659 Reverse -70 -88 7.98396 0.284
sll1658 Forward -113 -95 7.19731 0.284
slr1799 Reverse -33 -51 7.19731 0.284
slr1290 Reverse -120 -138 5.32902 0.296
ssr1604 Forward -308 -290 12.1139 0.206
slr0977 Reverse -77 -95 6.41066 0.284
ssr1766 Forward -68 -50 8.57394 0.284
slr1078 Forward -374 -356 8.57394 0.284
slr1079 Reverse -11 -29 5.91901 0.284
sll0656 Forward -212 -194 5.72234 0.286
sll0646 Reverse -147 -165 12.9988 0.206
ssr1155 Reverse -146 -164 11.0322 0.237
slr0689 Reverse -363 -381 11.0322 0.237
sll1513 Forward -91 -73 16.0471 0.123
slr1053 Reverse -122 -140 9.45892 0.284
slr1763 Forward -387 -369 11.0322 0.237
slr1848 Reverse -198 -216 7.68896 0.284
smr0006 Reverse -168 -186 6.41066 0.284
smr0007 Reverse -312 -330 6.41066 0.284
sll0995 Forward -143 -125 15.7521 0.123
ssr1720 Forward -230 -212 5.52568 0.289
sll0980 Forward -101 -83 7.68896 0.284
sll0980 Reverse -284 -302 6.31233 0.284
slr1385 Forward -198 -180 12.2122 0.206
slr1394 Reverse -59 -77 5.23069 0.298
sll1581 Reverse -260 -278 6.70565 0.284
slr1702 Forward -217 -199 6.70565 0.284
sll1580 Forward -99 -81 6.31233 0.284
ssr3410 Reverse -80 -98 6.214 0.284
slr2011 Reverse -345 -363 6.214 0.284
sll1084 Forward -22 -4 11.3272 0.228
slr1136 Reverse -291 -309 11.3272 0.228
slr1140 Forward -286 -268 8.67227 0.284
slr1196 Forward -91 -73 5.72234 0.286
slr1205 Reverse -225 -243 6.90232 0.284
sll1112 Reverse -144 -162 19.882 0.0624
slr1216 Forward -365 -347 19.882 0.0624
sll1971 Forward -329 -311 12.2122 0.206
slr2071 Reverse -323 -341 16.6371 0.123
sll1965 Forward -183 -165 7.59063 0.284
slr2076 Reverse -348 -366 7.59063 0.284
sll1740 Reverse -149 -167 5.82068 0.284
slr1540 Reverse -22 -40 10.6389 0.259
sll1462 Reverse -87 -105 5.72234 0.286
sll1632 Forward -268 -250 5.42735 0.289
sll1352 Forward -257 -239 15.8504 0.123
slr1449 Reverse -354 -372 7.00065 0.284
sll0867 Forward -95 -77 5.62401 0.289
slr0886 Reverse -23 -41 5.62401 0.289
slr1856 Reverse -114 -132 15.3588 0.132
slr1882 Forward -19 -1 9.16393 0.284
sll1699 Reverse -221 -239 7.09898 0.284
slr1811 Reverse -265 -283 8.37728 0.284
slr1822 Reverse -343 -361 9.16393 0.284
slr1737 Reverse -367 -385 7.00065 0.284
slr1747 Forward -188 -170 5.42735 0.289
sll1159 Reverse -193 -211 5.91901 0.284
slr1245 Forward -376 -358 5.91901 0.284
ssl2296 Forward -145 -127 6.31233 0.284
slr1262 Forward -391 -373 8.7706 0.284
sll1959 Reverse -20 -38 8.67227 0.284
sll1958 Reverse -125 -143 6.41066 0.284
slr2004 Forward -70 -52 6.80398 0.284
slr1731 Reverse -167 -185 6.11567 0.284
sll0238 Forward -382 -364 7.4923 0.284
slr2095 Forward -347 -329 13.3922 0.206
sll1429 Reverse -248 -266 5.82068 0.284
sll1241 Forward -191 -173 5.91901 0.284
sll1239 Reverse -105 -123 7.29564 0.284
slr1322 Forward -341 -323 7.29564 0.284
slr0806 Forward -282 -264 12.1139 0.206
sll1263 Forward -283 -265 6.11567 0.284
sll1244 Forward -110 -92 13.0972 0.206
sll1244 Forward -391 -373 8.18062 0.284
slr1353 Reverse -72 -90 13.0972 0.206
ssl3580 Reverse -126 -144 15.9488 0.123
ssl3580 Forward -138 -120 5.23069 0.298
slr1969 Reverse -299 -317 6.50899 0.284
slr1272 Forward -115 -97 11.7205 0.216
sll1556 Forward -250 -232 7.4923 0.284
ssr2723 Reverse -299 -317 6.80398 0.284
ssr0761 Reverse -22 -40 9.65558 0.284
sll0427 Reverse -235 -253 5.82068 0.284
sll0426 Reverse -24 -42 11.9172 0.206
slr0444 Forward -164 -146 11.9172 0.206
sll0420 Reverse -225 -243 6.60732 0.284
sll0364 Reverse -53 -71 5.52568 0.289
sll0361 Reverse -350 -368 12.0155 0.206
sll0136 Reverse -269 -287 12.9988 0.206
sll0136 Forward -322 -304 6.214 0.284
sll0135 Reverse -89 -107 9.45892 0.284
sll0173 Forward -351 -333 6.41066 0.284
slr0184 Reverse -247 -265 6.214 0.284
sml0001 Forward -210 -192 7.88563 0.284
sll0336 Forward -98 -80 9.65558 0.284
sll0754 Forward -278 -260 6.01734 0.284
ssl1417 Forward -19 -1 6.01734 0.284
ssl1417 Reverse -339 -357 5.52568 0.289
slr0350 Reverse -315 -333 8.96727 0.284
sll0312 Forward -105 -87 12.1139 0.206
slr0357 Reverse -62 -80 12.1139 0.206
slr0358 Reverse -176 -194 7.88563 0.284
sll0309 Forward -374 -356 5.42735 0.289
slr0018 Reverse -55 -73 5.52568 0.289
slr0213 Forward -19 -1 21.7503 0.0624
sll0416 Reverse -108 -126 5.42735 0.289
sll0461 Reverse -111 -129 12.9005 0.206
sll0461 Forward -207 -189 5.82068 0.284
slr0473 Forward -344 -326 12.9005 0.206
slr0473 Reverse -248 -266 5.82068 0.284
slr0489 Reverse -313 -331 6.60732 0.284
slr0650 Reverse -204 -222 6.01734 0.284
sll0371 Forward -180 -162 19.882 0.0624
slr0904 Reverse -318 -336 12.2122 0.206
sll0542 Reverse -205 -223 12.6055 0.206
slr0579 Forward -41 -23 12.6055 0.206
ssr1398 Reverse -333 -351 11.3272 0.228
slr0829 Forward -171 -153 5.52568 0.289
slr0839 Forward -238 -220 7.09898 0.284
sll0487 Forward -365 -347 7.09898 0.284
sll0479 Reverse -188 -206 9.16393 0.284
slr0514 Reverse -272 -290 7.09898 0.284
sll0586 Reverse -324 -342 6.60732 0.284
slr0623 Forward -40 -22 6.60732 0.284
sll0100 Reverse -273 -291 7.78729 0.284
ssl0546 Reverse -250 -268 6.60732 0.284
slr0790 Forward -336 -318 7.09898 0.284
sll0665 Reverse -106 -124 7.39397 0.284
sll0664 Reverse -216 -234 6.60732 0.284
sll0501 Reverse -100 -118 6.70565 0.284
slr0541 Forward -102 -84 6.70565 0.284
slr0553 Forward -286 -268 13.1955 0.206
slr1463 Reverse -315 -333 10.8356 0.247
sll1498 Forward -335 -317 6.01734 0.284
slr1568 Reverse -270 -288 6.214 0.284
slr1575 Forward -368 -350 6.01734 0.284
ssr1256 Forward -31 -13 8.27895 0.284
ssr2786 Forward -69 -51 11.6222 0.22
slr0453 Reverse -317 -335 7.09898 0.284
slr1188 Forward -166 -148 6.31233 0.284
sll0572 Reverse -301 -319 6.70565 0.284
slr0603 Forward -305 -287 6.90232 0.284
sll5003 Forward -141 -123 12.2122 0.206
sll5043 Reverse -291 -309 7.4923 0.284
sll5063 Forward -201 -183 12.3105 0.206
ssl5108 Reverse -33 -51 6.70565 0.284
ssl7021 Forward -216 -198 5.23069 0.298
slr7023 Reverse -271 -289 5.23069 0.298
slr7032 Reverse -228 -246 14.4738 0.167
ssr6002 Reverse -248 -266 8.57394 0.284
slr6014 Reverse -284 -302 19.6853 0.0624
slr6025 Forward -70 -52 9.65558 0.284
slr6073 Reverse -284 -302 19.6853 0.0624
slr6084 Forward -70 -52 9.65558 0.284
ssr6099 Forward -202 -184 5.42735 0.289
slr6107 Forward -62 -44 6.31233 0.284
6803t31 Reverse -207 -225 21.7503 0.0624
6803t39 Forward -370 -352 5.91901 0.284
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 0.000 0.571 0.429
0.286 0.429 0.286 0.000
0.000 0.714 0.000 0.286
0.857 0.000 0.000 0.143
0.714 0.143 0.143 0.000
0.286 0.429 0.286 0.000
0.000 0.571 0.000 0.429
0.571 0.000 0.000 0.429
0.000 0.000 1.000 0.000
0.000 0.571 0.000 0.429
0.000 1.000 0.000 0.000
0.286 0.143 0.571 0.000
1.000 0.000 0.000 0.000
0.286 0.000 0.000 0.714
0.000 0.857 0.000 0.143
0.714 0.000 0.286 0.000
0.000 0.571 0.286 0.143
0.000 1.000 0.000 0.000