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Details for NP_440539.1_9

Name NP_440539.1_9
Length 20
Regular expression CCCA[GC][GA]CTGGCCA[GA]CA[AG][CG]CC
Central No

Motif logo

Genes containing this motif

251 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1214 Forward -129 -110 -5.99873 0.286
slr1489 Forward -180 -161 0.687771 0.278
slr1490 Reverse -366 -385 -5.01543 0.286
sll1398 Reverse -121 -140 -7.57203 0.299
sll1061 Reverse -253 -272 -6.58872 0.286
slr1125 Reverse -303 -322 -6.39206 0.286
slr1130 Forward -43 -24 1.0811 0.278
slr1006 Reverse -309 -328 -1.7705 0.286
sll0228 Reverse -252 -271 -6.98204 0.294
slr0250 Reverse -200 -219 3.73603 0.23
sll1323 Reverse -231 -250 1.76941 0.278
sll1322 Reverse -231 -250 -4.91709 0.286
slr1416 Reverse -269 -288 -6.88371 0.293
sll1035 Forward -278 -259 -5.60541 0.286
sll1035 Forward -192 -173 -6.39206 0.286
slr1106 Reverse -43 -62 -6.39206 0.286
sll1683 Forward -174 -155 -3.24547 0.286
sll1664 Reverse -332 -351 -4.91709 0.286
sll1655 Reverse -252 -271 -7.37537 0.298
sll1654 Forward -125 -106 -6.1954 0.286
sll0939 Forward -338 -319 -2.45882 0.286
slr0976 Reverse -53 -72 -1.47551 0.286
slr0984 Reverse -72 -91 -1.96717 0.286
slr1610 Reverse -379 -398 -2.36049 0.286
slr1077 Forward -264 -245 -4.81876 0.286
ssr1765 Forward -230 -211 -5.70374 0.286
slr1083 Forward -137 -118 -5.9004 0.286
sll1017 Reverse -339 -358 -7.4737 0.299
slr0681 Reverse -193 -212 -7.37537 0.298
sll0641 Forward -166 -147 -6.49039 0.286
slr0688 Forward -97 -78 -0.4922 0.286
slr1052 Reverse -203 -222 -2.26216 0.286
slr1755 Forward -297 -278 -6.09707 0.286
sll1639 Forward -160 -141 0.0977854 0.278
slr1848 Forward -328 -309 -6.09707 0.286
sll1941 Reverse -326 -345 -3.63879 0.286
slr2042 Forward -134 -115 -3.63879 0.286
ssr3467 Reverse -96 -115 -5.31042 0.286
slr1917 Reverse -194 -213 -7.57203 0.299
sll1830 Forward -388 -369 -5.70374 0.286
slr1020 Forward -222 -203 -2.45882 0.286
sll0994 Forward -155 -136 -5.60541 0.286
slr1028 Forward -165 -146 -4.32711 0.286
slr1028 Reverse -173 -192 -4.81876 0.286
sll0984 Reverse -181 -200 -3.24547 0.286
sll1290 Forward -180 -161 -6.49039 0.286
sll1573 Forward -393 -374 1.47442 0.278
slr1710 Forward -169 -150 -5.60541 0.286
sll1926 Forward -147 -128 2.3594 0.278
slr2008 Reverse -285 -304 -0.983855 0.286
sll1080 Reverse -364 -383 -7.37537 0.298
sll1822 Forward -61 -42 5.211 0.23
sll1811 Forward -371 -352 -7.08038 0.298
sll1805 Forward -138 -119 -0.000545616 0.278
slr1896 Forward -149 -130 -5.50708 0.286
ssl2233 Reverse -354 -373 -6.09707 0.286
sll1124 Forward -67 -48 3.83436 0.23
sll1123 Forward -327 -308 5.211 0.23
slr1208 Forward -99 -80 -2.75381 0.286
sll1112 Reverse -79 -98 -7.37537 0.298
sll1746 Forward -251 -232 -1.37718 0.286
sll1742 Forward -50 -31 -7.57203 0.299
sll1740 Reverse -271 -290 -5.9004 0.286
slr1837 Forward -58 -39 -6.58872 0.286
slr1841 Forward -90 -71 -5.70374 0.286
slr1545 Reverse -256 -275 -5.70374 0.286
slr1233 Reverse -303 -322 -5.50708 0.286
sll1360 Reverse -253 -272 -0.983855 0.286
slr1442 Reverse -169 -188 0.884433 0.278
sll1352 Reverse -28 -47 -7.4737 0.299
slr1448 Forward -182 -163 -7.4737 0.299
sll1276 Reverse -375 -394 -3.54046 0.286
sll1267 Forward -366 -347 -6.88371 0.293
slr0875 Forward -221 -202 -1.96717 0.286
slr0876 Forward -336 -317 -4.72043 0.286
slr1407 Forward -354 -335 -2.55715 0.286
slr1854 Reverse -356 -375 -0.000545616 0.278
slr1861 Forward -349 -330 -7.08038 0.298
sll1763 Forward -125 -106 -1.37718 0.286
sll1757 Reverse -215 -234 -6.68705 0.287
ssr3189 Forward -218 -199 -0.000545616 0.278
slr1888 Reverse -272 -291 4.12936 0.23
slr2144 Reverse -359 -378 -7.57203 0.299
slr1815 Reverse -107 -126 -2.45882 0.286
sll1628 Forward -138 -119 -2.55715 0.286
slr1734 Reverse -26 -45 -2.55715 0.286
sll1618 Reverse -301 -320 -4.32711 0.286
slr0854 Reverse -288 -307 -6.29373 0.286
sll0856 Reverse -239 -258 -4.81876 0.286
sll0846 Forward -100 -81 -3.24547 0.286
slr0862 Reverse -90 -109 -3.24547 0.286
slr1251 Forward -344 -325 -6.58872 0.286
ssl2296 Forward -111 -92 -2.75381 0.286
slr1262 Reverse -130 -149 -1.7705 0.286
slr1999 Forward -82 -63 -6.58872 0.286
ssr3402 Forward -384 -365 -7.37537 0.298
sll1594 Reverse -67 -86 -7.37537 0.298
slr1727 Forward -381 -362 -7.37537 0.298
slr1731 Reverse -274 -293 0.982764 0.278
ssl0453 Forward -115 -96 -4.81876 0.286
slr2079 Reverse -246 -265 -2.65548 0.286
ssr3532 Reverse -212 -231 -6.58872 0.286
slr2082 Forward -203 -184 -1.86883 0.286
slr2083 Reverse -280 -299 -6.98204 0.294
slr1509 Reverse -275 -294 -4.32711 0.286
sll1225 Forward -44 -25 -7.27704 0.298
slr0812 Forward -237 -218 7.66927 0.23
slr1353 Forward -318 -299 -5.80207 0.286
sll1242 Reverse -79 -98 -0.39387 0.286
slr1956 Forward -54 -35 -0.39387 0.286
sll1882 Forward -171 -152 -1.47551 0.286
slr1975 Reverse -73 -92 -1.47551 0.286
sll1389 Reverse -98 -117 -4.42544 0.286
slr1469 Reverse -77 -96 -6.1954 0.286
slr1471 Forward -51 -32 -5.11376 0.286
slr1478 Forward -388 -369 4.62101 0.23
sll1439 Reverse -109 -128 -3.63879 0.286
slr1531 Forward -351 -332 -3.63879 0.286
sll1559 Forward -350 -331 -5.99873 0.286
slr1690 Reverse -295 -314 2.16274 0.278
slr1691 Reverse -73 -92 -0.787193 0.286
slr0952 Forward -321 -302 -3.73712 0.286
slr1648 Reverse -179 -198 -3.93378 0.286
sll0269 Forward -377 -358 -5.99873 0.286
slr0394 Forward -344 -325 -2.85214 0.286
ssr0657 Reverse -354 -373 -6.49039 0.286
slr0145 Reverse -181 -200 -3.63879 0.286
sll0142 Forward -363 -344 -5.70374 0.286
slr1935 Forward -182 -163 -6.29373 0.286
ssr3307 Reverse -381 -400 -0.0988766 0.281
slr1946 Forward -337 -318 -7.37537 0.298
slr0323 Forward -316 -297 -4.91709 0.286
sll0298 Forward -141 -122 -7.17871 0.298
sll0296 Forward -324 -305 -4.52377 0.286
slr0334 Reverse -365 -384 -4.32711 0.286
sll0294 Reverse -262 -281 -6.39206 0.286
sll0169 Reverse -217 -236 -3.93378 0.286
sll0163 Reverse -225 -244 -1.08219 0.286
slr0359 Forward -398 -379 -6.88371 0.293
sll0350 Reverse -92 -111 -6.29373 0.286
sml0001 Forward -209 -190 -4.13045 0.286
sml0001 Forward -341 -322 -5.80207 0.286
slr0363 Forward -369 -350 -6.29373 0.286
slr0364 Reverse -66 -85 -4.52377 0.286
slr0381 Forward -295 -276 2.75272 0.276
sll0328 Reverse -307 -326 -7.57203 0.299
sll0757 Reverse -142 -161 -7.27704 0.298
smr0001 Forward -129 -110 -7.27704 0.298
slr0780 Forward -378 -359 -7.27704 0.298
sll0755 Forward -228 -209 -6.29373 0.286
sll0325 Forward -111 -92 -5.70374 0.286
slr0342 Reverse -112 -131 -5.70374 0.286
sll0019 Forward -388 -369 -3.04881 0.286
slr0214 Reverse -321 -340 -4.13045 0.286
ssr0349 Forward -54 -35 1.27776 0.278
sll0207 Reverse -331 -350 -1.57384 0.286
slr0222 Reverse -315 -334 -0.983855 0.286
slr0224 Forward -217 -198 -6.1954 0.286
sll0192 Forward -220 -201 0.294447 0.278
ssl0788 Reverse -182 -201 -3.3438 0.286
slr0434 Reverse -84 -103 1.86774 0.278
slr0434 Forward -360 -341 -6.29373 0.286
sll0400 Forward -376 -357 4.71934 0.23
sll0069 Reverse -139 -158 0.884433 0.278
ssr0109 Forward -309 -290 -7.57203 0.299
slr0060 Reverse -106 -125 -3.83545 0.286
slr0061 Forward -184 -165 -5.40875 0.286
sll0461 Forward -366 -347 -4.52377 0.286
slr0473 Reverse -89 -108 -4.52377 0.286
sll0684 Forward -290 -271 -6.58872 0.286
sll0679 Reverse -299 -318 -5.60541 0.286
slr0635 Forward -328 -309 -6.68705 0.287
slr0644 Forward -208 -189 -6.1954 0.286
sll0384 Reverse -331 -350 -4.03212 0.286
sll0380 Reverse -305 -324 0.982764 0.278
sll0376 Reverse -184 -203 -2.36049 0.286
sll0374 Forward -124 -105 -6.09707 0.286
sll0373 Reverse -208 -227 9.53756 0.23
sll0373 Reverse -217 -236 -4.22878 0.286
sll0371 Forward -238 -219 -2.16383 0.286
sll0188 Forward -247 -228 -4.22878 0.286
slr0197 Forward -115 -96 1.47442 0.278
slr0197 Forward -239 -220 -6.29373 0.286
sll0179 Reverse -258 -277 -5.21209 0.286
ssr0330 Forward -21 -2 -2.65548 0.286
slr0209 Forward -375 -356 -2.65548 0.286
ssr1527 Forward -222 -203 -7.37537 0.298
sll0542 Forward -304 -285 3.6377 0.23
sll0834 Forward -240 -221 -7.17871 0.298
slr0845 Forward -256 -237 -5.99873 0.286
slr0077 Forward -369 -350 -5.01543 0.286
slr0078 Reverse -254 -273 6.29264 0.23
slr0081 Forward -283 -264 -6.78538 0.291
slr0093 Reverse -186 -205 -7.27704 0.298
slr0505 Forward -68 -49 7.07928 0.23
slr0520 Reverse -189 -208 -5.9004 0.286
sll0470 Reverse -108 -127 6.4893 0.23
sll0109 Forward -277 -258 -0.000545616 0.278
slr0793 Forward -230 -211 6.29264 0.23
sll0784 Reverse -363 -382 -4.03212 0.286
slr0699 Forward -319 -300 -4.52377 0.286
slr0023 Reverse -164 -183 7.37428 0.23
sll0044 Forward -330 -311 0.786102 0.278
sll0043 Forward -261 -242 1.27776 0.278
sll0043 Forward -83 -64 -4.22878 0.286
slr0043 Forward -150 -131 -6.98204 0.294
sll0508 Forward -324 -305 6.68596 0.23
sll0493 Reverse -261 -280 -4.13045 0.286
slr0925 Reverse -258 -277 -5.50708 0.286
sll0900 Reverse -254 -273 -6.68705 0.287
sll0537 Reverse -277 -296 13.5691 0.115
sll0535 Reverse -327 -346 -3.04881 0.286
slr0553 Reverse -370 -389 -3.24547 0.286
sll0521 Forward -150 -131 -6.88371 0.293
sll0519 Forward -202 -183 -1.67217 0.286
slr1418 Reverse -53 -72 -1.67217 0.286
slr1455 Reverse -242 -261 -1.37718 0.286
sll1366 Reverse -118 -137 0.294447 0.278
slr1463 Forward -88 -69 -4.13045 0.286
ssl2667 Reverse -64 -83 1.57275 0.278
ssl2667 Reverse -63 -82 -4.72043 0.286
sll0631 Forward -57 -38 1.76941 0.278
sll0622 Reverse -320 -339 4.32602 0.23
slr1576 Reverse -344 -363 -4.72043 0.286
sll1483 Reverse -284 -303 5.60432 0.23
sll1477 Reverse -371 -390 -3.44213 0.286
slr1583 Forward -267 -248 -3.44213 0.286
ssr1256 Forward -371 -352 24.1889 0.00451
slr1653 Reverse -22 -41 -6.98204 0.294
slr1657 Forward -310 -291 -4.03212 0.286
sll0444 Forward -169 -150 -6.49039 0.286
sll0430 Reverse -77 -96 -0.000545616 0.278
slr1176 Forward -254 -235 -0.000545616 0.278
slr1179 Reverse -201 -220 -4.42544 0.286
sll1109 Forward -184 -165 -7.27704 0.298
slr1186 Forward -92 -73 -0.295539 0.286
sll1106 Reverse -210 -229 2.55606 0.278
ssl5008 Forward -395 -376 -7.37537 0.298
slr5010 Reverse -273 -292 -4.03212 0.286
slr5010 Forward -222 -203 -6.09707 0.286
sll5049 Reverse -180 -199 -7.4737 0.299
slr5056 Forward -215 -196 -5.60541 0.286
sll5062 Reverse -225 -244 -5.9004 0.286
sll5079 Forward -160 -141 -7.17871 0.298
slr5082 Reverse -13 -32 -2.26216 0.286
ssl5100 Reverse -61 -80 -6.29373 0.286
slr5101 Forward -160 -141 -6.29373 0.286
ssl5103 Forward -219 -200 -5.70374 0.286
slr5116 Forward -260 -241 -6.78538 0.291
slr5119 Reverse -13 -32 -2.26216 0.286
sll7030 Forward -261 -242 -5.70374 0.286
slr7059 Reverse -273 -292 -6.98204 0.294
slr7083 Reverse -294 -313 -1.57384 0.286
slr7091 Forward -253 -234 -5.60541 0.286
sll8018 Reverse -82 -101 -5.60541 0.286
slr6038 Forward -219 -200 -5.70374 0.286
6803t08 Reverse -366 -385 -4.32711 0.286
6803t08 Forward -358 -339 -4.81876 0.286
6803t13 Forward -348 -329 -6.68705 0.287
6803t32 Forward -301 -282 -3.83545 0.286
6803t42 Reverse -348 -367 -7.4737 0.299
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 1.000 0.000 0.000
0.125 0.750 0.125 0.000
1.000 0.000 0.000 0.000
0.125 0.250 0.625 0.000
0.375 0.000 0.625 0.000
0.000 1.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 0.875 0.125
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.875 0.125 0.000
1.000 0.000 0.000 0.000
0.375 0.000 0.625 0.000
0.125 0.750 0.125 0.000
1.000 0.000 0.000 0.000
0.500 0.000 0.500 0.000
0.125 0.500 0.250 0.125
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000