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Details for NP_440519.1_3

Name NP_440519.1_3
Length 20
Regular expression [GA]GC[CT]T[CT]AC[CT]TTGG[CG]T[AT]TTGG
Central No

Motif logo

Genes containing this motif

94 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1490 Forward -384 -365 8.75091 0.282
sll1186 Reverse -218 -237 20.4523 0.054
sll0926 Forward -172 -153 11.1109 0.224
sll0925 Reverse -65 -84 11.2092 0.22
slr0974 Forward -202 -183 11.2092 0.22
slr1063 Reverse -140 -159 8.55425 0.282
slr1077 Reverse -246 -265 7.66927 0.285
slr1084 Reverse -137 -156 13.6675 0.138
sll1019 Reverse -331 -350 13.7658 0.137
slr1400 Forward -334 -315 18.584 0.0809
ssr1155 Reverse -67 -86 9.0459 0.282
slr0689 Reverse -284 -303 9.0459 0.282
ssr1736 Reverse -44 -63 8.75091 0.282
slr1050 Reverse -316 -335 8.75091 0.282
ssr3129 Forward -109 -90 7.57094 0.289
slr2035 Forward -56 -37 8.45592 0.282
slr1906 Reverse -149 -168 12.5858 0.167
slr1916 Forward -27 -8 9.3409 0.282
sll0994 Reverse -137 -156 9.24257 0.282
slr1022 Reverse -115 -134 10.4225 0.25
slr1376 Forward -269 -250 17.5024 0.0839
sll1294 Forward -140 -121 17.8957 0.083
sll1293 Forward -139 -120 9.83255 0.268
slr2015 Forward -46 -27 8.45592 0.282
slr1140 Reverse -340 -359 10.3242 0.255
sll1818 Reverse -292 -311 7.86593 0.285
sll1787 Forward -357 -338 9.24257 0.282
slr1201 Forward -99 -80 8.65258 0.282
ssr2016 Reverse -198 -217 9.14423 0.282
slr1841 Reverse -129 -148 10.4225 0.25
sll1129 Forward -82 -63 13.8641 0.137
ssr2060 Reverse -1 -20 13.8641 0.137
ssr2061 Reverse -323 -342 13.8641 0.137
slr1437 Forward -110 -91 12.0942 0.187
sll0872 Reverse -340 -359 14.5524 0.137
slr0886 Reverse -116 -135 9.73422 0.268
ssl2598 Forward -398 -379 9.43923 0.282
sll1304 Reverse -180 -199 15.5357 0.123
slr1808 Reverse -246 -265 12.5858 0.167
sll1688 Forward -277 -258 13.8641 0.137
slr1820 Reverse -98 -117 13.8641 0.137
sll1156 Forward -275 -256 7.66927 0.285
sll1609 Reverse -272 -291 10.8159 0.239
sll1606 Reverse -103 -122 7.66927 0.285
sll0241 Reverse -81 -100 7.86593 0.285
sll0240 Reverse -354 -373 7.7676 0.285
sll0813 Forward -146 -127 13.3725 0.149
ssl1498 Reverse -241 -260 16.9124 0.092
slr1974 Reverse -286 -305 8.06259 0.285
ssl2717 Forward -108 -89 13.7658 0.137
slr1269 Forward -116 -97 20.8456 0.054
ssl2162 Forward -69 -50 7.66927 0.285
slr1171 Forward -321 -302 23.7955 0.0301
slr1693 Reverse -133 -152 8.75091 0.282
sll0913 Reverse -189 -208 10.1275 0.26
sll0418 Forward -218 -199 8.75091 0.282
sll0263 Reverse -1 -20 10.8159 0.239
slr0285 Reverse -145 -164 12.4875 0.167
slr0285 Forward -395 -376 10.6192 0.25
slr0165 Reverse -324 -343 19.174 0.079
slr0186 Forward -209 -190 9.73422 0.268
sll0753 Reverse -67 -86 8.16093 0.285
ssl0787 Reverse -366 -385 11.9958 0.192
sll0072 Reverse -226 -245 9.73422 0.268
sll0062 Reverse -39 -58 9.73422 0.268
sll0374 Forward -254 -235 11.7008 0.201
slr0191 Reverse -341 -360 12.5858 0.167
slr0918 Forward -82 -63 9.53756 0.276
slr0923 Forward -260 -241 10.5209 0.25
sll0544 Reverse -25 -44 8.45592 0.282
slr0572 Forward -389 -370 8.45592 0.282
sll0834 Forward -196 -177 7.66927 0.285
sll0827 Reverse -315 -334 15.2408 0.123
sll0827 Forward -175 -156 7.7676 0.285
slr0841 Reverse -92 -111 7.7676 0.285
sll0593 Forward -23 -4 11.6025 0.201
slr0615 Reverse -184 -203 11.6025 0.201
slr0926 Reverse -240 -259 11.7008 0.201
sll0534 Reverse -147 -166 18.289 0.0809
sll0533 Forward -180 -161 8.94757 0.282
slr0549 Reverse -314 -333 8.94757 0.282
ssl1004 Forward -111 -92 10.4225 0.25
sll0520 Forward -137 -118 12.1925 0.185
sll0729 Forward -380 -361 7.66927 0.285
slr0601 Reverse -89 -108 7.7676 0.285
ssl5015 Forward -352 -333 15.3391 0.123
sll5081 Forward -251 -232 21.9273 0.0377
slr5082 Reverse -239 -258 21.9273 0.0377
ssl7022 Forward -320 -301 12.5858 0.167
ssl7039 Reverse -255 -274 12.5858 0.167
slr7041 Forward -105 -86 12.5858 0.167
sll7064 Forward -202 -183 7.86593 0.285
slr7082 Reverse -290 -309 8.16093 0.285
slr7088 Reverse -351 -370 10.2259 0.255
slr7096 Forward -217 -198 8.75091 0.282
6803t07 Reverse -256 -275 9.93088 0.268
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.333  0.000  0.667  0.000  
0.000 0.000 1.000 0.000
0.167 0.500 0.167 0.167
0.000 0.500 0.000 0.500
0.000 0.000 0.000 1.000
0.000 0.500 0.000 0.500
0.833 0.167 0.000 0.000
0.000 0.833 0.167 0.000
0.167 0.333 0.167 0.333
0.167 0.000 0.167 0.667
0.167 0.167 0.167 0.500
0.167 0.167 0.667 0.000
0.000 0.000 1.000 0.000
0.000 0.500 0.333 0.167
0.000 0.167 0.000 0.833
0.500 0.000 0.000 0.500
0.000 0.000 0.000 1.000
0.000 0.000 0.167 0.833
0.000 0.000 1.000 0.000
0.000 0.167 0.833 0.000