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Details for NP_440447.1_1

Name NP_440447.1_1
Length 19
Regular expression [CG]CC[CT][CA][GA]GCGA[GAT]C[AG][AC]A[GC][CA]AA
Central No

Motif logo

Genes containing this motif

242 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -201 -183 6.70565 0.194
slr1312 Reverse -60 -78 6.50899 0.194
sll1408 Forward -371 -353 2.28076 0.285
sll1399 Forward -141 -123 6.41066 0.194
slr1495 Reverse -237 -255 6.41066 0.194
sll1396 Forward -176 -158 4.83737 0.222
slr1498 Reverse -230 -248 4.83737 0.222
sll1063 Forward -115 -97 6.50899 0.194
slr1119 Reverse -110 -128 6.50899 0.194
sll1061 Reverse -270 -288 1.78911 0.29
slr1124 Forward -322 -304 1.88744 0.288
sll1049 Reverse -324 -342 6.31233 0.194
slr1127 Reverse -324 -342 3.46073 0.255
slr0243 Reverse -101 -119 3.46073 0.255
sll0230 Forward -129 -111 5.62401 0.194
slr0244 Reverse -103 -121 5.62401 0.194
sll1327 Forward -250 -232 6.31233 0.194
slr1416 Forward -312 -294 8.86894 0.194
sll1041 Reverse -75 -93 4.05072 0.242
slr1097 Forward -111 -93 4.83737 0.222
slr1099 Forward -214 -196 12.1139 0.148
sll1037 Forward -300 -282 3.46073 0.255
slr1777 Reverse -265 -283 16.3421 0.104
slr1778 Forward -293 -275 13.0972 0.125
slr1793 Reverse -345 -363 9.95058 0.194
sll1666 Forward -84 -66 3.75572 0.246
sll1659 Forward -261 -243 3.95239 0.242
sll1201 Reverse -33 -51 4.54237 0.223
slr1291 Forward -193 -175 4.54237 0.223
ssr2142 Reverse -180 -198 3.95239 0.242
slr0966 Reverse -6 -24 3.06741 0.27
slr0971 Reverse -121 -139 13.0972 0.125
slr0974 Reverse -298 -316 2.47742 0.283
sll0924 Reverse -44 -62 7.00065 0.194
slr1611 Forward -178 -160 6.70565 0.194
sll0656 Forward -208 -190 7.19731 0.194
sll0648 Forward -247 -229 2.57575 0.278
sll1510 Reverse -151 -169 18.8004 0.104
sll1636 Reverse -81 -99 3.3624 0.255
slr1770 Forward -212 -194 3.3624 0.255
slr2045 Forward -103 -85 4.24738 0.237
slr2049 Forward -346 -328 8.08229 0.194
slr2049 Reverse -211 -229 2.0841 0.285
slr1907 Forward -138 -120 9.36059 0.194
slr1911 Reverse -189 -207 5.91901 0.194
sll1830 Reverse -207 -225 2.57575 0.278
ssl1911 Forward -209 -191 2.18243 0.285
slr1022 Forward -180 -162 15.0638 0.104
sll0990 Forward -327 -309 1.39578 0.3
slr1028 Reverse -305 -323 1.39578 0.3
sll0985 Forward -75 -57 5.82068 0.194
slr1037 Reverse -355 -373 5.82068 0.194
sll0983 Reverse -88 -106 2.77242 0.278
sll0982 Forward -397 -379 2.96908 0.271
sll1298 Forward -312 -294 5.62401 0.194
slr1383 Reverse -355 -373 5.62401 0.194
sll1294 Reverse -322 -340 6.90232 0.194
ssl2542 Reverse -257 -275 1.59244 0.299
sll1286 Forward -121 -103 8.37728 0.194
sll1285 Forward -189 -171 8.27895 0.194
sll1568 Forward -171 -153 3.55906 0.255
sll1912 Forward -221 -203 6.01734 0.194
slr1137 Forward -214 -196 6.11567 0.194
sll1070 Reverse -215 -233 3.3624 0.255
ssl3446 Forward -88 -70 5.03403 0.222
sll1803 Reverse -336 -354 1.78911 0.29
ssl3432 Reverse -42 -60 1.78911 0.29
sll1787 Forward -187 -169 3.75572 0.246
sll1965 Reverse -277 -295 13.0972 0.125
slr2076 Forward -254 -236 13.0972 0.125
sll1747 Forward -299 -281 6.214 0.194
sll1745 Forward -77 -59 3.3624 0.255
sll1739 Reverse -37 -55 1.88744 0.288
sll1737 Reverse -87 -105 3.95239 0.242
slr1828 Forward -163 -145 3.95239 0.242
sll1724 Forward -146 -128 2.0841 0.285
slr1844 Forward -144 -126 4.14905 0.242
sll1469 Forward -187 -169 9.85225 0.194
slr1547 Forward -155 -137 7.4923 0.194
ssr2611 Forward -322 -304 9.36059 0.194
slr1222 Reverse -103 -121 3.46073 0.255
slr1224 Reverse -360 -378 7.88563 0.194
slr1234 Reverse -145 -163 1.98577 0.288
slr1434 Reverse -185 -203 6.60732 0.194
sll1360 Forward -251 -233 19.587 0.104
slr1440 Reverse -243 -261 2.28076 0.285
sll1349 Forward -293 -275 4.73903 0.223
slr0878 Forward -139 -121 1.49411 0.3
slr0880 Forward -267 -249 1.49411 0.3
slr0882 Forward -164 -146 2.57575 0.278
sll0869 Reverse -217 -235 1.49411 0.3
sll0868 Forward -58 -40 3.85406 0.245
slr1857 Forward -38 -20 3.06741 0.27
sll1780 Forward -279 -261 9.65558 0.194
sll1768 Reverse -191 -209 4.6407 0.223
sll1625 Reverse -161 -179 6.41066 0.194
sll1620 Reverse -374 -392 4.54237 0.223
slr1740 Forward -367 -349 4.54237 0.223
slr1744 Reverse -180 -198 4.44404 0.226
slr0854 Reverse -257 -275 4.73903 0.223
sll0848 Reverse -104 -122 2.96908 0.271
sll0839 Forward -121 -103 5.91901 0.194
sll1160 Reverse -131 -149 6.214 0.194
slr1255 Forward -132 -114 5.62401 0.194
slr2003 Forward -337 -319 6.01734 0.194
slr1722 Reverse -112 -130 5.62401 0.194
slr1724 Forward -265 -247 9.65558 0.194
ssr2912 Reverse -88 -106 5.52568 0.199
slr0263 Reverse -381 -399 1.49411 0.3
slr0264 Forward -170 -152 2.18243 0.285
sll0245 Forward -144 -126 1.59244 0.299
slr2083 Forward -31 -13 3.3624 0.255
sll1981 Reverse -378 -396 4.9357 0.222
slr2099 Forward -95 -77 7.68896 0.194
sll1973 Reverse -370 -388 6.70565 0.194
ssl2789 Reverse -338 -356 2.28076 0.285
sll1423 Forward -135 -117 15.4571 0.104
slr1506 Reverse -300 -318 15.4571 0.104
slr2128 Forward -222 -204 7.19731 0.194
slr2131 Forward -349 -331 4.34571 0.231
slr1332 Forward -96 -78 2.87075 0.274
sml0008 Forward -224 -206 16.7354 0.104
slr0813 Reverse -342 -360 1.39578 0.3
ssr1391 Reverse -31 -49 3.85406 0.245
ssl3573 Reverse -294 -312 2.57575 0.278
sll1883 Reverse -234 -252 1.98577 0.288
sll1882 Forward -345 -327 2.0841 0.285
slr1467 Forward -246 -228 6.70565 0.194
slr1275 Reverse -59 -77 13.0972 0.125
sll1172 Reverse -170 -188 14.6705 0.104
slr1279 Forward -113 -95 14.6705 0.104
sll1095 Forward -184 -166 9.45892 0.194
slr1170 Forward -38 -20 12.0155 0.148
slr1670 Forward -77 -59 3.75572 0.246
slr1677 Reverse -230 -248 6.01734 0.194
slr1691 Reverse -89 -107 2.67408 0.278
slr1004 Forward -390 -372 7.68896 0.194
slr0936 Reverse -361 -379 7.68896 0.194
sll0916 Reverse -105 -123 7.88563 0.194
sll0916 Reverse -382 -400 6.70565 0.194
slr0950 Reverse -133 -151 6.50899 0.194
sll1521 Forward -352 -334 14.3755 0.109
sll1521 Forward -150 -132 2.47742 0.283
slr0280 Forward -123 -105 4.54237 0.223
sll0268 Forward -390 -372 4.54237 0.223
sll0266 Forward -160 -142 7.00065 0.194
slr0285 Reverse -360 -378 2.77242 0.278
sll0364 Forward -302 -284 3.65739 0.251
slr0400 Forward -143 -125 1.88744 0.288
sll0355 Reverse -332 -350 11.3272 0.172
sll1849 Reverse -209 -227 2.57575 0.278
slr1942 Forward -229 -211 5.82068 0.194
slr1942 Forward -168 -150 4.83737 0.222
ssr3307 Reverse -14 -32 7.88563 0.194
slr0323 Forward -159 -141 7.88563 0.194
sll0301 Reverse -35 -53 8.57394 0.194
slr0328 Forward -66 -48 1.88744 0.288
slr0329 Reverse -107 -125 3.06741 0.27
sll0160 Reverse -343 -361 3.95239 0.242
sml0001 Reverse -135 -153 5.13236 0.218
slr0769 Forward -307 -289 5.62401 0.194
slr0776 Reverse -114 -132 5.72234 0.194
slr1003 Forward -365 -347 7.09898 0.194
sll0757 Forward -341 -323 8.57394 0.194
slr0780 Reverse -179 -197 8.57394 0.194
sll0005 Reverse -354 -372 7.78729 0.194
sll0202 Forward -235 -217 13.0972 0.125
slr0230 Reverse -96 -114 7.29564 0.194
sll0192 Forward -265 -247 15.7521 0.104
slr0233 Forward -63 -45 5.32902 0.209
sll0410 Reverse -76 -94 8.67227 0.194
sll0409 Reverse -327 -345 2.67408 0.278
sll0055 Forward -330 -312 7.19731 0.194
slr0477 Reverse -364 -382 4.44404 0.226
slr0483 Forward -246 -228 3.95239 0.242
slr0489 Reverse -200 -218 2.18243 0.285
slr0491 Reverse -288 -306 1.39578 0.3
sll0682 Reverse -18 -36 4.54237 0.223
sll0609 Reverse -193 -211 2.96908 0.271
slr0416 Forward -257 -239 3.16574 0.268
sll0382 Reverse -177 -195 5.72234 0.194
sll0379 Reverse -339 -357 2.87075 0.274
sll0374 Reverse -258 -276 7.39397 0.194
sll0370 Reverse -150 -168 3.06741 0.27
sll0178 Reverse -80 -98 4.83737 0.222
sll0887 Forward -396 -378 5.82068 0.194
sll0542 Forward -32 -14 1.88744 0.288
slr0579 Reverse -214 -232 1.88744 0.288
slr0833 Forward -156 -138 6.50899 0.194
slr0081 Reverse -240 -258 12.3105 0.147
slr0093 Reverse -299 -317 5.23069 0.213
sll0488 Forward -196 -178 6.01734 0.194
slr0509 Reverse -351 -369 2.0841 0.285
sll0595 Reverse -30 -48 5.91901 0.194
sll0585 Reverse -263 -281 3.65739 0.251
slr0794 Reverse -124 -142 12.3105 0.147
sll0794 Forward -167 -149 6.60732 0.194
slr0712 Reverse -243 -261 4.44404 0.226
ssl1263 Forward -215 -197 2.0841 0.285
sll0742 Reverse -173 -191 6.70565 0.194
slr0023 Reverse -167 -185 1.78911 0.29
sll0509 Forward -217 -199 6.80398 0.194
sll0528 Reverse -137 -155 9.16393 0.194
sll0528 Reverse -205 -223 4.54237 0.223
slr1425 Reverse -382 -400 3.85406 0.245
slr1459 Reverse -274 -292 5.23069 0.213
sll1496 Forward -182 -164 2.96908 0.271
sll1495 Forward -329 -311 2.37909 0.284
sll1489 Reverse -184 -202 9.26226 0.194
slr1577 Forward -72 -54 2.67408 0.278
slr1577 Reverse -308 -326 2.28076 0.285
sll1483 Reverse -152 -170 4.73903 0.223
sll1476 Forward -199 -181 8.47561 0.194
slr0752 Forward -334 -316 4.83737 0.222
sll0726 Reverse -46 -64 2.37909 0.284
slr0756 Forward -296 -278 2.37909 0.284
slr1653 Reverse -38 -56 7.4923 0.194
slr1653 Reverse -308 -326 3.75572 0.246
ssr2781 Reverse -120 -138 2.0841 0.285
sll0436 Forward -299 -281 1.39578 0.3
slr0588 Forward -242 -224 14.9655 0.104
slr0588 Reverse -259 -277 8.67227 0.194
sll0565 Forward -276 -258 1.59244 0.299
sll0563 Reverse -317 -335 6.70565 0.194
slr0608 Forward -268 -250 4.83737 0.222
sll5002 Reverse -306 -324 6.11567 0.194
sll5002 Forward -187 -169 2.0841 0.285
ssl5015 Forward -162 -144 3.95239 0.242
sll5043 Reverse -111 -129 4.6407 0.223
sll5062 Reverse -377 -395 8.18062 0.194
ssl5114 Forward -101 -83 7.09898 0.194
slr5115 Reverse -65 -83 7.09898 0.194
sll7009 Forward -179 -161 5.42735 0.204
slr7025 Reverse -237 -255 2.57575 0.278
sll7034 Reverse -57 -75 15.7521 0.104
ssr7035 Forward -396 -378 15.7521 0.104
ssl7048 Reverse -127 -145 4.05072 0.242
slr7049 Forward -78 -60 4.05072 0.242
sll7050 Reverse -186 -204 3.3624 0.255
slr7052 Forward -165 -147 3.3624 0.255
slr7081 Forward -297 -279 7.68896 0.194
slr7091 Reverse -259 -277 5.72234 0.194
sll8004 Reverse -104 -122 2.87075 0.274
ssr6046 Reverse -265 -283 6.31233 0.194
ssl6092 Forward -349 -331 2.18243 0.285
6803t05 Forward -56 -38 7.00065 0.194
6803t08 Forward -226 -208 1.39578 0.3
6803t11 Forward -290 -272 5.03403 0.222
6803t13 Forward -178 -160 2.67408 0.278
6803t28 Forward -187 -169 7.09898 0.194
6803t42 Forward -101 -83 2.37909 0.284
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.714  0.286  0.000  
0.000 0.857 0.143 0.000
0.000 1.000 0.000 0.000
0.143 0.429 0.000 0.429
0.429 0.571 0.000 0.000
0.286 0.000 0.714 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.286 0.000 0.429 0.286
0.000 0.857 0.000 0.143
0.714 0.000 0.286 0.000
0.714 0.286 0.000 0.000
0.857 0.000 0.000 0.143
0.143 0.286 0.571 0.000
0.429 0.571 0.000 0.000
0.714 0.143 0.143 0.000
1.000 0.000 0.000 0.000