Your browser is old and dusty. Try Google Chrome!

Details for NP_440398.1_6

Name NP_440398.1_6
Length 20
Regular expression [CT]T[AT][TC]AC[CT]CCC[GC]AA[GAC][GA][GAC]TGG[GC]
Central Yes

Motif logo

Genes containing this motif

144 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1056 Forward -374 -355 7.07928 0.262
sll1039 Forward -62 -43 3.14605 0.294
slr1095 Reverse -120 -139 3.14605 0.294
slr1105 Forward -147 -128 3.83436 0.294
slr1787 Forward -166 -147 3.44104 0.294
sll1192 Reverse -303 -322 7.86593 0.234
ssr2153 Forward -332 -313 7.86593 0.234
slr1302 Reverse -11 -30 4.22769 0.282
sll1184 Reverse -140 -159 3.73603 0.294
sll0926 Reverse -214 -233 5.40766 0.275
sll0924 Reverse -202 -221 4.32602 0.275
sll0922 Reverse -371 -390 2.85105 0.294
slr0977 Forward -363 -344 2.85105 0.294
slr0680 Reverse -5 -24 8.84924 0.214
slr0681 Reverse -264 -283 8.84924 0.214
sll0647 Forward -60 -41 3.53937 0.294
slr1590 Forward -134 -115 7.37428 0.246
slr1591 Forward -62 -43 3.04771 0.294
slr1591 Forward -93 -74 2.65439 0.294
slr1041 Forward -282 -263 3.14605 0.294
slr1041 Forward -314 -295 2.65439 0.294
slr1043 Forward -252 -233 3.44104 0.294
slr1046 Reverse -211 -230 3.73603 0.294
slr1047 Reverse -160 -179 3.24438 0.294
sll1005 Forward -178 -159 6.98095 0.263
ssl1918 Reverse -251 -270 3.14605 0.294
slr1846 Forward -223 -204 24.2872 0.0206
slr1851 Forward -171 -152 8.75091 0.214
ssr3409 Forward -42 -23 5.40766 0.275
ssr3410 Forward -332 -313 5.40766 0.275
slr2012 Forward -23 -4 6.68596 0.269
slr1146 Reverse -147 -166 5.60432 0.275
slr1147 Forward -97 -78 5.60432 0.275
slr1537 Reverse -64 -83 2.3594 0.294
slr1752 Forward -235 -216 6.39097 0.275
sll1131 Forward -305 -286 2.3594 0.294
slr1443 Forward -358 -339 3.24438 0.294
sll1282 Reverse -49 -68 3.83436 0.294
sll0864 Reverse -87 -106 3.14605 0.294
ssl3379 Reverse -246 -265 2.45773 0.294
sll1709 Reverse -10 -29 2.3594 0.294
sll1688 Reverse -117 -136 4.62101 0.275
slr1820 Forward -258 -239 4.62101 0.275
slr1734 Forward -248 -229 2.3594 0.294
sll1621 Forward -391 -372 5.11266 0.275
sll1618 Reverse -60 -79 2.3594 0.294
slr1742 Forward -60 -41 2.3594 0.294
ssr2078 Reverse -185 -204 3.24438 0.294
sll1606 Reverse -231 -250 8.84924 0.214
slr1724 Forward -302 -283 2.85105 0.294
sll1592 Reverse -154 -173 10.6192 0.214
slr0265 Forward -230 -211 7.47261 0.246
sll0236 Reverse -124 -143 3.04771 0.294
sll1983 Reverse -70 -89 2.3594 0.294
slr2099 Reverse -246 -265 3.93269 0.294
sll1425 Reverse -313 -332 8.65258 0.214
slr1512 Forward -292 -273 4.52268 0.275
slr1517 Forward -240 -221 14.2574 0.133
slr1521 Reverse -194 -213 13.6675 0.137
sll1994 Reverse -107 -126 3.73603 0.294
slr2130 Forward -304 -285 3.73603 0.294
sll1236 Reverse -274 -293 2.75272 0.294
slr1325 Forward -97 -78 2.75272 0.294
sll0813 Forward -319 -300 2.65439 0.294
slr0812 Forward -338 -319 4.42435 0.275
sll1866 Forward -305 -286 9.83255 0.214
slr1469 Reverse -10 -29 3.24438 0.294
slr1470 Reverse -356 -375 3.24438 0.294
slr1174 Forward -59 -40 4.916 0.275
slr1678 Reverse -82 -101 9.3409 0.214
slr1678 Reverse -114 -133 5.30933 0.275
slr1679 Reverse -271 -290 11.3075 0.204
sll0916 Forward -252 -233 5.50599 0.275
slr0953 Reverse -126 -145 16.2241 0.115
ssr2723 Reverse -169 -188 10.5209 0.214
sll1536 Forward -99 -80 9.43923 0.214
slr1628 Reverse -37 -56 9.43923 0.214
sll1520 Forward -249 -230 2.65439 0.294
slr0291 Forward -159 -140 3.6377 0.294
slr0398 Reverse -196 -215 4.71934 0.275
slr0145 Forward -339 -320 17.0107 0.115
slr0149 Forward -367 -348 3.73603 0.294
slr0152 Forward -387 -368 3.34271 0.294
slr1946 Reverse -190 -209 6.68596 0.269
sll0177 Reverse -213 -232 4.71934 0.275
sll0162 Reverse -69 -88 4.916 0.275
slr0179 Forward -166 -147 4.916 0.275
sll0761 Reverse -162 -181 12.3892 0.203
slr0009 Forward -355 -336 2.55606 0.294
slr0232 Reverse -79 -98 4.03102 0.29
sll0689 Forward -62 -43 2.65439 0.294
sll0685 Reverse -30 -49 2.55606 0.294
slr0643 Reverse -139 -158 2.45773 0.294
sll0606 Forward -275 -256 6.29264 0.275
sll0398 Reverse -167 -186 2.3594 0.294
sll0179 Forward -313 -294 3.6377 0.294
sll0888 Reverse -120 -139 4.52268 0.275
slr0907 Reverse -289 -308 3.14605 0.294
sll0549 Forward -57 -38 4.81767 0.275
slr0569 Reverse -239 -258 4.81767 0.275
slr0073 Reverse -197 -216 16.5191 0.115
sll0485 Reverse -246 -265 3.14605 0.294
slr0518 Forward -136 -117 11.7992 0.204
slr0523 Forward -171 -152 4.42435 0.275
sll0585 Reverse -372 -391 8.45592 0.214
slr0624 Forward -378 -359 8.45592 0.214
slr0699 Forward -298 -279 6.78429 0.269
slr0702 Reverse -333 -352 9.43923 0.214
sll0031 Forward -199 -180 5.40766 0.275
slr0038 Reverse -260 -279 5.40766 0.275
slr0042 Forward -188 -169 2.65439 0.294
slr0535 Forward -40 -21 3.44104 0.294
sll0496 Forward -297 -278 5.30933 0.275
sll0537 Forward -397 -378 6.19431 0.275
slr0550 Reverse -264 -283 5.99764 0.275
sll1366 Reverse -243 -262 2.45773 0.294
sll0631 Forward -234 -215 4.12936 0.283
slr0656 Forward -226 -207 4.71934 0.275
sll0624 Reverse -136 -155 3.04771 0.294
sll0624 Reverse -105 -124 2.65439 0.294
slr0662 Forward -279 -260 3.04771 0.294
slr0662 Forward -310 -291 2.65439 0.294
slr1556 Reverse -53 -72 2.3594 0.294
sll1470 Forward -278 -259 5.70265 0.275
slr0750 Forward -66 -47 7.47261 0.246
sll0445 Forward -306 -287 6.19431 0.275
slr1178 Forward -278 -259 11.4058 0.204
sll5006 Forward -343 -324 13.9625 0.133
sll5044 Reverse -166 -185 3.14605 0.294
sll5044 Reverse -134 -153 2.65439 0.294
sll5052 Forward -266 -247 5.50599 0.275
sll5090 Forward -343 -324 13.9625 0.133
ssr5092 Reverse -377 -396 13.9625 0.133
ssr7018 Reverse -360 -379 4.32602 0.275
ssr7018 Reverse -287 -306 4.32602 0.275
ssr7018 Reverse -215 -234 4.32602 0.275
ssr7018 Reverse -143 -162 4.32602 0.275
ssr7018 Reverse -71 -90 4.32602 0.275
ssr7018 Reverse -2 -21 4.32602 0.275
ssl7019 Forward -358 -339 4.32602 0.275
ssl7019 Forward -284 -265 4.32602 0.275
ssl7019 Forward -206 -187 4.32602 0.275
ssl7019 Forward -132 -113 4.32602 0.275
ssl7019 Forward -58 -39 4.32602 0.275
ssl7020 Forward -359 -340 4.32602 0.275
ssl7020 Forward -285 -266 4.32602 0.275
ssl7020 Forward -212 -193 4.32602 0.275
ssl7020 Forward -142 -123 4.32602 0.275
ssl7020 Forward -69 -50 4.32602 0.275
ssl7021 Forward -121 -102 4.32602 0.275
ssl7021 Forward -53 -34 4.32602 0.275
slr7023 Reverse -366 -385 4.32602 0.275
sll7078 Forward -177 -158 2.65439 0.294
slr7080 Reverse -52 -71 2.65439 0.294
ssl8008 Forward -228 -209 15.1424 0.133
sll8020 Forward -326 -307 6.39097 0.275
sll8032 Reverse -141 -160 2.55606 0.294
ssr6003 Forward -343 -324 13.9625 0.133
slr6025 Forward -58 -39 4.12936 0.283
ssl6061 Reverse -321 -340 11.2092 0.204
slr6063 Forward -343 -324 11.2092 0.204
slr6084 Forward -58 -39 4.12936 0.283
6803t05 Reverse -315 -334 3.14605 0.294
6803t21 Forward -87 -68 2.85105 0.294
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.091  0.636  0.000  0.273  
0.000 0.000 0.000 1.000
0.727 0.000 0.000 0.273
0.000 0.273 0.000 0.727
1.000 0.000 0.000 0.000
0.000 1.000 0.000 0.000
0.182 0.545 0.000 0.273
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.091 0.636 0.091 0.182
0.091 0.364 0.545 0.000
1.000 0.000 0.000 0.000
0.636 0.000 0.182 0.182
0.273 0.273 0.455 0.000
0.364 0.182 0.455 0.000
0.273 0.273 0.364 0.091
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.273 0.727 0.000