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Details for NP_440364.1_6

Name NP_440364.1_6
Length 14
Regular expression C[GT][GAC]C[GAT][AC]TGC[CT][GC][AT]T[GT]
Central Yes

Motif logo

Genes containing this motif

168 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1115 Reverse -209 -222 14.8666 0.275
sll1063 Reverse -354 -367 13.785 0.275
ssl2069 Forward -353 -340 13.785 0.275
slr0725 Forward -135 -122 14.67 0.275
slr0728 Reverse -81 -94 13.3917 0.282
slr0738 Forward -251 -238 15.85 0.275
slr0738 Forward -257 -244 14.2767 0.275
sll0222 Forward -181 -168 15.3583 0.275
sll0222 Reverse -290 -303 15.26 0.275
sgl0002 Reverse -66 -79 15.26 0.275
slr0254 Reverse -340 -353 15.3583 0.275
slr0254 Forward -231 -218 15.26 0.275
sll1029 Forward -78 -65 14.4733 0.275
slr1772 Forward -349 -336 14.67 0.275
slr1793 Forward -360 -347 13.6867 0.275
sll1196 Reverse -351 -364 14.375 0.275
slr1307 Forward -237 -224 14.1783 0.275
sll0928 Forward -223 -210 13.9817 0.275
slr1079 Reverse -191 -204 13.6867 0.275
slr1600 Reverse -300 -313 14.375 0.275
sll1501 Reverse -98 -111 14.375 0.275
slr1053 Reverse -216 -229 13.195 0.29
sll1004 Forward -72 -59 13.49 0.278
ssl1923 Forward -194 -181 13.6867 0.275
ssl1918 Reverse -378 -391 13.195 0.29
slr1760 Reverse -32 -45 13.195 0.29
sll1640 Reverse -313 -326 15.1616 0.275
ssr3451 Forward -383 -370 13.785 0.275
slr2041 Forward -358 -345 15.85 0.275
sll1933 Forward -376 -363 15.3583 0.275
sll1932 Reverse -308 -321 13.49 0.278
sll1831 Reverse -175 -188 13.195 0.29
slr1019 Reverse -200 -213 15.4566 0.275
slr1022 Forward -182 -169 13.2934 0.282
sll0992 Reverse -317 -330 15.7516 0.275
slr1383 Reverse -122 -135 13.9817 0.275
sll1285 Forward -44 -31 15.26 0.275
sll1574 Reverse -186 -199 16.0466 0.275
slr2012 Forward -306 -293 14.8666 0.275
sll1913 Forward -121 -108 13.2934 0.282
slr1143 Forward -268 -255 13.6867 0.275
sll1069 Reverse -221 -234 13.8833 0.275
sll1813 Forward -279 -266 13.2934 0.282
sll1802 Forward -390 -377 13.6867 0.275
sll1801 Forward -35 -22 13.6867 0.275
slr1195 Forward -199 -186 13.3917 0.282
slr1197 Forward -320 -307 13.6867 0.275
slr1202 Reverse -259 -272 18.2099 0.136
ssl3712 Forward -24 -11 13.2934 0.282
ssl3335 Reverse -269 -282 13.2934 0.282
sll1726 Reverse -290 -303 13.785 0.275
sll1723 Forward -360 -347 14.8666 0.275
sll1717 Forward -240 -227 13.6867 0.275
sll1457 Reverse -282 -295 13.5883 0.275
sll1450 Forward -391 -378 13.3917 0.282
slr1232 Forward -271 -258 15.26 0.275
ssl2250 Forward -80 -67 13.5883 0.275
sll1127 Forward -213 -200 14.375 0.275
slr1240 Forward -337 -324 13.6867 0.275
slr1240 Reverse -179 -192 13.49 0.278
slr1438 Reverse -161 -174 14.7683 0.275
sll1362 Forward -278 -265 13.785 0.275
sll1348 Reverse -327 -340 15.7516 0.275
sll1270 Forward -136 -123 13.6867 0.275
sll0868 Forward -54 -41 14.375 0.275
sll0864 Forward -207 -194 14.7683 0.275
slr1855 Forward -234 -221 13.6867 0.275
slr1860 Reverse -207 -220 15.0633 0.275
slr1878 Forward -233 -220 15.0633 0.275
slr1879 Forward -296 -283 17.7182 0.143
sll2011 Reverse -294 -307 14.7683 0.275
slr1811 Forward -290 -277 13.2934 0.282
slr1747 Forward -139 -126 14.375 0.275
slr1263 Reverse -297 -310 14.375 0.275
slr2002 Forward -301 -288 14.1783 0.275
slr1724 Reverse -366 -379 13.3917 0.282
sll0252 Reverse -137 -150 14.2767 0.275
slr0261 Forward -85 -72 14.2767 0.275
slr0265 Forward -316 -303 15.3583 0.275
slr0269 Forward -329 -316 13.5883 0.275
ssr3532 Reverse -308 -321 13.2934 0.282
slr2084 Forward -181 -168 13.6867 0.275
sll1973 Forward -30 -17 14.2767 0.275
slr2105 Reverse -143 -156 14.2767 0.275
slr1522 Forward -340 -327 13.8833 0.275
slr2108 Forward -263 -250 13.2934 0.282
ssr2194 Forward -306 -293 13.6867 0.275
sll1228 Forward -239 -226 13.49 0.278
sll0818 Forward -232 -219 14.375 0.275
sll0808 Reverse -293 -306 13.2934 0.282
slr0821 Forward -128 -115 13.2934 0.282
ssl3573 Forward -309 -296 13.6867 0.275
sll1894 Forward -347 -334 14.375 0.275
ssl2717 Forward -159 -146 14.67 0.275
sll1174 Forward -71 -58 16.7349 0.275
sll1101 Forward -172 -159 13.2934 0.282
slr1678 Forward -351 -338 14.375 0.275
slr1678 Reverse -334 -347 14.375 0.275
slr0953 Forward -385 -372 13.5883 0.275
ssr2754 Forward -217 -204 14.375 0.275
slr0280 Forward -82 -69 15.7516 0.275
slr0280 Forward -387 -374 15.1616 0.275
sll0364 Forward -261 -248 13.49 0.278
slr0395 Forward -296 -283 13.2934 0.282
sll1854 Forward -332 -319 14.375 0.275
slr1940 Reverse -229 -242 14.2767 0.275
slr0325 Forward -352 -339 14.375 0.275
sll0177 Forward -300 -287 14.5717 0.275
sll0177 Reverse -86 -99 13.785 0.275
sll0168 Forward -335 -322 18.1116 0.136
sll0158 Reverse -2 -15 14.1783 0.275
slr0185 Forward -205 -192 16.1449 0.275
slr0369 Forward -93 -80 14.375 0.275
slr0374 Forward -130 -117 16.1449 0.275
slr0374 Forward -239 -226 14.4733 0.275
slr0376 Forward -251 -238 13.5883 0.275
slr0379 Reverse -350 -363 15.0633 0.275
sll0759 Forward -118 -105 13.9817 0.275
sll0309 Forward -261 -248 14.7683 0.275
slr0001 Reverse -212 -225 14.375 0.275
slr0213 Forward -116 -103 14.7683 0.275
sll0210 Forward -281 -268 16.0466 0.275
slr0049 Reverse -123 -136 13.6867 0.275
ssr0109 Forward -377 -364 13.5883 0.275
sll0055 Reverse -229 -242 14.08 0.275
slr0476 Forward -326 -313 13.3917 0.282
sll0688 Reverse -170 -183 15.3583 0.275
sll0683 Reverse -250 -263 13.785 0.275
slr0644 Forward -390 -377 13.6867 0.275
sll0384 Reverse -221 -234 14.5717 0.275
sll0374 Forward -267 -254 16.5383 0.275
sll0552 Forward -223 -210 18.0132 0.136
sll0545 Forward -225 -212 13.195 0.29
ssl1533 Reverse -11 -24 13.195 0.29
slr0845 Forward -200 -187 13.195 0.29
sll0084 Reverse -358 -371 16.1449 0.275
slr0086 Forward -280 -267 14.67 0.275
slr0505 Reverse -74 -87 14.1783 0.275
slr0509 Forward -375 -362 13.8833 0.275
slr0520 Forward -174 -161 14.08 0.275
slr0626 Reverse -356 -369 13.6867 0.275
slr0106 Forward -364 -351 14.7683 0.275
slr0299 Forward -122 -109 13.6867 0.275
slr0312 Forward -233 -220 14.67 0.275
slr0790 Forward -240 -227 13.9817 0.275
sll0797 Reverse -336 -349 15.85 0.275
slr0707 Reverse -27 -40 14.2767 0.275
sll0667 Forward -232 -219 13.6867 0.275
slr0711 Forward -374 -361 13.6867 0.275
sll0739 Forward -272 -259 19.1932 0.0778
sll0517 Forward -314 -301 13.6867 0.275
slr0530 Reverse -228 -241 17.6199 0.143
sll0506 Reverse -260 -273 13.785 0.275
sll0528 Forward -220 -207 13.6867 0.275
slr1419 Reverse -303 -316 15.1616 0.275
sll1334 Forward -343 -330 13.49 0.278
ssr2439 Forward -322 -309 14.08 0.275
sll1482 Reverse -89 -102 13.3917 0.282
sll0729 Forward -249 -236 13.6867 0.275
slr1658 Reverse -65 -78 14.7683 0.275
slr0457 Reverse -356 -369 13.785 0.275
slr1186 Forward -170 -157 13.785 0.275
sll5002 Forward -321 -308 13.6867 0.275
sll5035 Reverse -346 -359 13.9817 0.275
slr7032 Reverse -89 -102 13.49 0.278
slr7073 Forward -240 -227 13.49 0.278
slr7101 Reverse -163 -176 15.4566 0.275
sll8011 Reverse -81 -94 13.785 0.275
ssl8028 Forward -230 -217 13.5883 0.275
slr8037 Forward -263 -250 14.4733 0.275
ssr6024 Forward -239 -226 13.5883 0.275
slr6050 Reverse -126 -139 13.6867 0.275
ssr6083 Forward -239 -226 13.5883 0.275
6803t09 Reverse -85 -98 13.2934 0.282
6803t31 Reverse -110 -123 14.7683 0.275
6803t42 Forward -217 -204 16.5383 0.275
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.059 0.176 0.529 0.235
0.294 0.294 0.412 0.000
0.000 0.941 0.000 0.059
0.235 0.176 0.353 0.235
0.529 0.294 0.000 0.176
0.000 0.118 0.118 0.765
0.000 0.118 0.882 0.000
0.059 0.588 0.176 0.176
0.000 0.765 0.000 0.235
0.000 0.235 0.765 0.000
0.588 0.059 0.000 0.353
0.000 0.118 0.000 0.882
0.000 0.059 0.706 0.235