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Details for NP_440296.1_6

Name NP_440296.1_6
Length 19
Regular expression [AT][GA][TA]TT[TG][AG]TTA[AG]T[ACT][TC][TA]T[TA]TT
Central No

Motif logo

Genes containing this motif

225 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1212 Forward -214 -196 12.1295 0.295
slr1312 Reverse -15 -33 11.5565 0.295
sll1204 Forward -31 -13 13.4663 0.295
sll1203 Reverse -22 -40 13.2754 0.295
sll1406 Reverse -43 -61 16.9041 0.282
ssl2069 Forward -298 -280 12.3204 0.295
sll1053 Reverse -16 -34 10.9836 0.295
slr1123 Forward -253 -235 10.9836 0.295
sll0708 Reverse -133 -151 13.5618 0.292
slr1788 Reverse -300 -318 12.6069 0.295
slr1789 Reverse -369 -387 11.079 0.295
sll1670 Reverse -292 -310 13.5618 0.292
sll1656 Reverse -18 -36 11.079 0.295
slr1616 Forward -101 -83 11.3655 0.295
sll0640 Forward -29 -11 16.9996 0.282
slr0688 Reverse -47 -65 16.9996 0.282
ssr1155 Forward -27 -9 11.461 0.295
slr0689 Forward -244 -226 11.461 0.295
slr1594 Forward -355 -337 17.9545 0.282
sll1516 Forward -333 -315 11.7475 0.295
slr1596 Reverse -56 -74 11.7475 0.295
sll1513 Forward -32 -14 11.5565 0.295
sll1751 Forward -39 -21 10.0286 0.298
ssr3129 Reverse -6 -24 10.8881 0.295
sll1945 Forward -210 -192 10.6971 0.295
slr2033 Reverse -26 -44 10.6971 0.295
slr2034 Reverse -112 -130 15.7582 0.283
slr1919 Forward -351 -333 10.9836 0.295
ssr1698 Forward -29 -11 10.4106 0.295
slr1397 Reverse -370 -388 10.2196 0.298
slr2017 Reverse -162 -180 13.9438 0.292
sll1920 Reverse -153 -171 11.5565 0.295
slr2023 Forward -36 -18 11.5565 0.295
sll1068 Forward -373 -355 10.6016 0.295
ssl3451 Forward -91 -73 10.6016 0.295
slr1890 Reverse -40 -58 10.6016 0.295
slr1899 Reverse -81 -99 10.4106 0.295
sll1747 Forward -189 -171 11.27 0.295
sll1737 Reverse -215 -233 10.9836 0.295
slr1828 Forward -35 -17 10.9836 0.295
slr1844 Forward -203 -185 10.4106 0.295
sll1468 Forward -273 -255 9.83765 0.298
ssr2595 Reverse -66 -84 9.83765 0.298
slr1544 Reverse -327 -345 9.83765 0.298
slr1545 Forward -88 -70 13.6573 0.292
slr1230 Reverse -112 -130 13.6573 0.292
slr1233 Reverse -73 -91 13.8483 0.292
slr1368 Forward -116 -98 10.6971 0.295
slr1369 Reverse -70 -88 11.843 0.295
slr0883 Reverse -115 -133 15.4717 0.283
sll1308 Reverse -263 -281 10.5061 0.295
slr1406 Forward -129 -111 10.5061 0.295
slr1862 Reverse -75 -93 12.034 0.295
slr1864 Reverse -147 -165 11.27 0.295
slr1882 Forward -37 -19 15.5672 0.283
sll2012 Reverse -204 -222 9.93315 0.298
sll2007 Reverse -48 -66 13.7528 0.292
slr1816 Reverse -10 -28 12.1295 0.295
sll1687 Forward -399 -381 12.7979 0.295
slr1737 Forward -82 -64 10.4106 0.295
sll1160 Forward -41 -23 10.3151 0.295
sll1157 Reverse -199 -217 17.9545 0.282
sll1957 Forward -46 -28 9.83765 0.298
slr2057 Reverse -326 -344 9.83765 0.298
ssl3127 Reverse -162 -180 17.477 0.282
sll1596 Reverse -255 -273 11.3655 0.295
slr1730 Forward -172 -154 21.2012 0.14
slr0260 Forward -121 -103 11.843 0.295
sll0247 Forward -271 -253 9.93315 0.298
slr0267 Reverse -239 -257 9.93315 0.298
slr0271 Forward -181 -163 14.0393 0.291
ssr3532 Reverse -20 -38 14.1348 0.291
slr2080 Reverse -249 -267 14.1348 0.291
sll1980 Forward -112 -94 12.7024 0.295
sll1997 Forward -142 -124 12.7979 0.295
slr2110 Reverse -54 -72 12.7979 0.295
slr2111 Reverse -18 -36 10.0286 0.298
slr2116 Forward -189 -171 19.7688 0.243
sll1240 Reverse -33 -51 12.3204 0.295
sll1233 Forward -61 -43 10.6971 0.295
sll1226 Forward -81 -63 9.93315 0.298
sll1223 Forward -37 -19 18.1455 0.282
slr1334 Forward -172 -154 11.27 0.295
sll0816 Reverse -226 -244 10.9836 0.295
sll0815 Reverse -364 -382 10.7926 0.295
sll0808 Forward -70 -52 14.0393 0.291
slr0821 Reverse -351 -369 14.0393 0.291
sll0804 Reverse -285 -303 14.1348 0.291
sll0803 Forward -37 -19 9.83765 0.298
slr1340 Reverse -192 -210 14.7077 0.283
sll1876 Reverse -86 -104 9.93315 0.298
sll1180 Forward -43 -25 12.1295 0.295
slr1265 Reverse -317 -335 12.1295 0.295
slr1277 Forward -42 -24 9.93315 0.298
sll1169 Reverse -334 -352 9.83765 0.298
sll1166 Forward -69 -51 14.6123 0.283
sll1436 Reverse -232 -250 14.9942 0.283
slr1171 Forward -44 -26 10.1241 0.298
sll1089 Forward -274 -256 10.8881 0.295
slr1004 Forward -176 -158 10.7926 0.295
slr0935 Reverse -108 -126 10.7926 0.295
slr1634 Reverse -118 -136 11.7475 0.295
sll1528 Forward -159 -141 12.034 0.295
slr1645 Reverse -29 -47 11.27 0.295
sll0147 Reverse -199 -217 17.286 0.282
ssl0259 Forward -328 -310 11.843 0.295
slr0156 Reverse -111 -129 13.7528 0.292
slr0156 Reverse -265 -283 11.843 0.295
sll1852 Forward -44 -26 14.6123 0.283
slr1944 Forward -353 -335 10.6971 0.295
slr0364 Forward -48 -30 12.6069 0.295
sll0772 Forward -98 -80 10.9836 0.295
sll0022 Forward -110 -92 11.843 0.295
slr0001 Reverse -113 -131 11.843 0.295
sll0016 Reverse -223 -241 12.7024 0.295
slr0006 Forward -176 -158 12.7024 0.295
slr0013 Forward -50 -32 11.3655 0.295
sll0012 Reverse -381 -399 12.6069 0.295
slr0021 Forward -32 -14 10.2196 0.298
sll0415 Forward -245 -227 10.8881 0.295
sll0413 Reverse -314 -332 11.1745 0.295
sll0461 Forward -160 -142 10.4106 0.295
slr0473 Reverse -295 -313 10.4106 0.295
sll0691 Forward -117 -99 12.7024 0.295
sll0615 Reverse -218 -236 12.225 0.295
sll0609 Forward -336 -318 11.1745 0.295
sll0608 Forward -67 -49 11.1745 0.295
slr0642 Reverse -336 -354 11.1745 0.295
slr0650 Forward -115 -97 10.5061 0.295
sll0381 Forward -57 -39 11.461 0.295
sll0368 Reverse -134 -152 15.3762 0.283
slr0426 Forward -203 -185 15.3762 0.283
slr0427 Reverse -134 -152 11.652 0.295
slr0194 Reverse -334 -352 11.9385 0.295
sll0180 Reverse -133 -151 10.8881 0.295
slr0204 Forward -124 -106 10.8881 0.295
ssl0331 Reverse -82 -100 12.1295 0.295
slr0212 Forward -128 -110 12.1295 0.295
ssr0336 Reverse -186 -204 9.93315 0.298
slr0901 Reverse -149 -167 13.3709 0.295
slr0906 Reverse -41 -59 16.4266 0.283
slr0914 Reverse -21 -39 11.652 0.295
sll0891 Reverse -313 -331 10.8881 0.295
ssl1690 Reverse -57 -75 10.8881 0.295
slr0921 Forward -326 -308 10.8881 0.295
slr1002 Reverse -119 -137 14.8987 0.283
slr0572 Forward -26 -8 14.8987 0.283
slr0846 Forward -237 -219 10.3151 0.295
sll0088 Forward -149 -131 10.3151 0.295
slr0074 Reverse -107 -125 10.3151 0.295
slr0083 Forward -69 -51 13.7528 0.292
sll0586 Forward -84 -66 9.93315 0.298
slr0623 Reverse -280 -298 9.93315 0.298
sll0102 Forward -166 -148 14.8032 0.283
sll0102 Reverse -169 -187 12.7979 0.295
sll0102 Reverse -160 -178 12.034 0.295
slr0105 Reverse -180 -198 14.8032 0.283
slr0105 Forward -177 -159 12.7979 0.295
slr0105 Forward -186 -168 12.034 0.295
slr0111 Reverse -12 -30 13.1799 0.295
slr0119 Reverse -123 -141 12.5114 0.295
sll0288 Forward -19 -1 14.8032 0.283
slr0298 Reverse -193 -211 14.8032 0.283
slr0301 Forward -126 -108 14.3258 0.291
slr0699 Reverse -112 -130 11.27 0.295
slr0699 Forward -185 -167 11.27 0.295
sll0667 Reverse -31 -49 14.0393 0.291
sll0664 Forward -79 -61 15.2807 0.283
sll0664 Reverse -62 -80 14.3258 0.291
slr0709 Reverse -87 -105 15.2807 0.283
slr0709 Forward -104 -86 14.3258 0.291
sll0661 Forward -28 -10 13.6573 0.292
sll0742 Forward -93 -75 12.4159 0.295
slr0536 Forward -358 -340 10.3151 0.295
sll0507 Forward -29 -11 10.1241 0.298
sll0499 Forward -206 -188 10.6971 0.295
slr0544 Reverse -222 -240 10.6971 0.295
ssl1004 Forward -337 -319 11.7475 0.295
slr1421 Reverse -237 -255 11.9385 0.295
slr0658 Reverse -161 -179 10.4106 0.295
slr1563 Reverse -271 -289 15.5672 0.283
sll1491 Forward -252 -234 14.8032 0.283
slr1567 Reverse -274 -292 14.8032 0.283
sll1549 Forward -393 -375 10.6971 0.295
slr1655 Reverse -112 -130 10.6971 0.295
sll1545 Forward -143 -125 12.7024 0.295
sll1545 Reverse -126 -144 10.3151 0.295
slr1664 Reverse -34 -52 12.7024 0.295
slr1664 Forward -51 -33 10.3151 0.295
slr0458 Reverse -97 -115 11.1745 0.295
sll0430 Forward -56 -38 10.4106 0.295
slr1176 Reverse -275 -293 10.4106 0.295
sll0572 Reverse -379 -397 11.5565 0.295
slr0593 Forward -89 -71 17.095 0.282
slr0597 Forward -23 -5 9.93315 0.298
slr0604 Reverse -262 -280 14.7077 0.283
ssl5001 Reverse -186 -204 16.4266 0.283
sll5004 Forward -289 -271 16.9041 0.282
sll5006 Reverse -7 -25 12.034 0.295
sll5006 Reverse -361 -379 9.83765 0.298
ssl5007 Reverse -13 -31 9.83765 0.298
slr5023 Reverse -27 -45 10.3151 0.295
sll5052 Reverse -105 -123 10.2196 0.298
slr5053 Forward -114 -96 10.2196 0.298
ssl5064 Reverse -3 -21 10.8881 0.295
ssl5070 Reverse -363 -381 9.93315 0.298
sll5090 Reverse -7 -25 12.034 0.295
sll5090 Reverse -361 -379 9.83765 0.298
ssl5091 Reverse -13 -31 9.83765 0.298
ssr5092 Forward -359 -341 9.83765 0.298
ssl5125 Reverse -306 -324 12.9889 0.295
slr5126 Forward -184 -166 12.9889 0.295
sll7006 Reverse -6 -24 10.6016 0.295
sll7006 Reverse -367 -385 10.4106 0.295
ssl7007 Reverse -140 -158 10.4106 0.295
slr7016 Reverse -7 -25 15.8536 0.283
slr7016 Reverse -11 -29 12.1295 0.295
slr7016 Reverse -20 -38 11.461 0.295
ssl7038 Forward -101 -83 12.4159 0.295
ssl7038 Reverse -327 -345 10.8881 0.295
ssl7039 Reverse -26 -44 10.8881 0.295
ssr7040 Reverse -318 -336 12.4159 0.295
ssr7040 Forward -92 -74 10.8881 0.295
slr7041 Forward -334 -316 10.8881 0.295
slr7057 Forward -35 -17 11.079 0.295
sll7067 Forward -227 -209 14.7077 0.283
slr7068 Reverse -100 -118 14.7077 0.283
sll7077 Reverse -2 -20 10.0286 0.298
slr7094 Forward -272 -254 11.079 0.295
ssr6002 Reverse -13 -31 9.83765 0.298
ssr6003 Reverse -7 -25 12.034 0.295
ssr6003 Reverse -361 -379 9.83765 0.298
slr6004 Reverse -204 -222 12.034 0.295
slr6014 Reverse -186 -204 13.1799 0.295
ssl6061 Forward -303 -285 9.83765 0.298
ssr6062 Reverse -13 -31 9.83765 0.298
slr6063 Reverse -7 -25 12.034 0.295
slr6063 Reverse -361 -379 9.83765 0.298
slr6073 Reverse -186 -204 13.1799 0.295
sll6093 Forward -237 -219 10.7926 0.295
slr6094 Reverse -3 -21 10.7926 0.295
slr6095 Reverse -339 -357 10.7926 0.295
6803t02 Reverse -11 -29 13.5618 0.292
6803t26 Reverse -181 -199 14.6123 0.283
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.615  0.154  0.000  0.231  
0.308 0.000 0.692 0.000
0.462 0.000 0.000 0.538
0.154 0.077 0.000 0.769
0.000 0.077 0.077 0.846
0.077 0.077 0.308 0.538
0.462 0.154 0.231 0.154
0.000 0.154 0.000 0.846
0.077 0.000 0.000 0.923
1.000 0.000 0.000 0.000
0.615 0.000 0.385 0.000
0.000 0.000 0.000 1.000
0.385 0.308 0.000 0.308
0.154 0.231 0.000 0.615
0.231 0.000 0.154 0.615
0.000 0.077 0.000 0.923
0.308 0.000 0.000 0.692
0.077 0.000 0.000 0.923
0.077 0.000 0.154 0.769