Your browser is old and dusty. Try Google Chrome!

Details for NP_440227.1_2

Name NP_440227.1_2
Length 17
Regular expression [TG]AA[TA]TT[TC][ACT]TG[AC][CA][CA]AA[AC]T
Central No

Motif logo

Genes containing this motif

265 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1491 Reverse -14 -30 7.13836 0.295
slr1492 Forward -24 -8 9.20332 0.29
sll1396 Forward -235 -219 8.80999 0.29
slr1498 Reverse -171 -187 8.80999 0.29
slr1116 Reverse -310 -326 10.0883 0.29
sll1063 Reverse -82 -98 14.9065 0.271
slr1119 Forward -143 -127 14.9065 0.271
sll1052 Forward -241 -225 9.20332 0.29
slr0728 Reverse -335 -351 14.7098 0.271
sll0700 Forward -229 -213 8.41667 0.29
slr0737 Forward -356 -340 9.49831 0.29
sll1324 Forward -68 -52 8.80999 0.29
sll1041 Forward -376 -360 18.7414 0.188
slr1100 Forward -253 -237 8.61333 0.29
sll1027 Reverse -248 -264 11.4649 0.274
slr1109 Forward -31 -15 11.4649 0.274
slr1774 Forward -155 -139 9.00665 0.29
sll1679 Forward -244 -228 7.53169 0.295
ssr3000 Forward -20 -4 10.9733 0.28
sll1198 Forward -244 -228 7.2367 0.295
ssl2384 Forward -60 -44 7.2367 0.295
slr1300 Forward -169 -153 7.92501 0.29
slr0963 Reverse -257 -273 9.69497 0.29
slr0964 Forward -294 -278 10.1866 0.29
sll0939 Forward -45 -29 12.2516 0.271
sll0936 Forward -260 -244 8.22001 0.29
slr1613 Forward -151 -135 16.7748 0.188
slr1619 Reverse -241 -257 18.5448 0.188
slr1068 Reverse -125 -141 7.13836 0.295
slr1071 Reverse -130 -146 8.22001 0.29
ssr1768 Reverse -224 -240 7.04003 0.295
sll1017 Reverse -32 -48 7.63002 0.295
slr1400 Forward -210 -194 7.63002 0.295
sll0651 Forward -229 -213 8.41667 0.29
slr1592 Forward -117 -101 7.43336 0.295
slr1595 Forward -331 -315 9.7933 0.29
slr1600 Reverse -190 -206 11.2683 0.274
sll1505 Forward -22 -6 8.71166 0.29
sll1502 Forward -82 -66 7.82668 0.29
ssr2708 Reverse -140 -156 7.82668 0.29
sll1003 Forward -287 -271 18.5448 0.188
sll1003 Reverse -215 -231 8.41667 0.29
slr1759 Reverse -111 -127 17.3648 0.188
slr1851 Reverse -179 -195 12.8416 0.271
sll1930 Forward -229 -213 8.41667 0.29
slr1908 Forward -391 -375 9.59664 0.29
slr1020 Forward -232 -216 8.80999 0.29
slr1023 Forward -122 -106 8.80999 0.29
slr1025 Forward -235 -219 8.515 0.29
sll1297 Forward -290 -274 8.02334 0.29
slr1704 Reverse -38 -54 7.92501 0.29
sll1575 Reverse -349 -365 12.0549 0.271
sll1574 Reverse -33 -49 12.0549 0.271
sll1571 Forward -104 -88 7.72835 0.29
sll1916 Reverse -79 -95 7.43336 0.295
sll1912 Forward -215 -199 8.71166 0.29
slr1137 Forward -33 -17 7.53169 0.295
sll1123 Forward -34 -18 17.7581 0.188
ssr2016 Reverse -115 -131 12.8416 0.271
slr1208 Forward -238 -222 8.12167 0.29
slr1211 Forward -82 -66 7.92501 0.29
sll1730 Reverse -123 -139 7.04003 0.295
slr1834 Forward -293 -277 7.04003 0.295
sll1722 Reverse -308 -324 12.9399 0.271
slr1837 Forward -346 -330 12.9399 0.271
sll1714 Forward -236 -220 8.61333 0.29
slr1536 Forward -56 -40 7.53169 0.295
sll1454 Forward -329 -313 7.82668 0.29
slr1229 Forward -18 -2 11.5633 0.274
ssr2062 Forward -198 -182 7.04003 0.295
slr0875 Forward -166 -150 7.33503 0.295
slr0877 Forward -130 -114 11.0716 0.28
sll0871 Forward -23 -7 12.9399 0.271
slr0884 Reverse -293 -309 12.9399 0.271
ssr1499 Reverse -266 -282 17.5614 0.188
sll0865 Reverse -108 -124 7.72835 0.29
slr1409 Reverse -35 -51 9.69497 0.29
slr1859 Forward -19 -3 7.13836 0.295
slr1860 Forward -240 -224 14.4149 0.271
slr1861 Forward -101 -85 8.61333 0.29
slr1866 Forward -133 -117 8.22001 0.29
sll1773 Reverse -82 -98 13.9232 0.271
slr1871 Forward -48 -32 13.9232 0.271
slr2132 Forward -154 -138 9.49831 0.29
slr1803 Reverse -206 -222 8.22001 0.29
sll1694 Reverse -356 -372 8.31834 0.29
slr1735 Reverse -8 -24 8.02334 0.29
slr0857 Forward -229 -213 8.41667 0.29
sll0844 Reverse -317 -333 9.00665 0.29
sll1162 Reverse -37 -53 8.515 0.29
sll1905 Reverse -175 -191 10.5799 0.29
sll1613 Forward -332 -316 10.8749 0.28
sll1613 Reverse -233 -249 7.13836 0.295
sll1611 Reverse -334 -350 8.41667 0.29
slr1716 Forward -229 -213 8.41667 0.29
sll1605 Reverse -34 -50 11.2683 0.274
slr1718 Forward -229 -213 11.2683 0.274
slr1730 Forward -139 -123 7.13836 0.295
sll0249 Forward -42 -26 8.80999 0.29
sll1984 Forward -229 -213 8.41667 0.29
slr2104 Reverse -112 -128 7.04003 0.295
sll1428 Reverse -215 -231 10.8749 0.28
slr1503 Forward -181 -165 10.8749 0.28
sll1418 Reverse -176 -192 8.12167 0.29
sll1415 Reverse -382 -398 7.04003 0.295
ssr3571 Reverse -195 -211 9.30165 0.29
slr2107 Reverse -28 -44 9.30165 0.29
slr2113 Forward -229 -213 8.41667 0.29
sll1239 Forward -99 -83 8.12167 0.29
slr1322 Reverse -347 -363 8.12167 0.29
slr1327 Forward -79 -63 7.2367 0.295
sll1219 Forward -155 -139 11.3666 0.274
sll1263 Forward -183 -167 8.22001 0.29
sll1258 Forward -200 -184 12.9399 0.271
sll1257 Forward -229 -213 8.41667 0.29
sll1899 Forward -57 -41 8.22001 0.29
sll1890 Reverse -54 -70 9.00665 0.29
slr1969 Forward -138 -122 9.00665 0.29
sll1882 Forward -329 -313 7.82668 0.29
sll1880 Forward -142 -126 13.2349 0.271
sll1880 Reverse -140 -156 8.31834 0.29
sll1873 Forward -72 -56 7.04003 0.295
slr1984 Forward -392 -376 10.9733 0.28
sll1439 Reverse -24 -40 11.3666 0.274
sll1437 Forward -229 -213 8.41667 0.29
sll1434 Reverse -177 -193 12.3499 0.271
slr1534 Forward -62 -46 9.89163 0.29
slr1152 Forward -200 -184 7.43336 0.295
slr1161 Reverse -39 -55 10.1866 0.29
slr1162 Reverse -128 -144 16.0865 0.228
slr1163 Reverse -203 -219 10.3833 0.29
ssr2806 Reverse -152 -168 9.30165 0.29
slr0937 Forward -118 -102 14.0215 0.271
sll1524 Forward -275 -259 9.00665 0.29
slr1644 Reverse -50 -66 9.00665 0.29
sll0427 Reverse -294 -310 7.72835 0.29
sll0422 Forward -365 -349 18.2498 0.188
slr0448 Forward -220 -204 7.82668 0.29
slr0286 Reverse -59 -75 18.5448 0.188
sll0364 Reverse -351 -367 9.00665 0.29
slr0399 Reverse -3 -19 12.3499 0.271
sll0147 Forward -285 -269 12.5466 0.271
sll1851 Reverse -227 -243 8.41667 0.29
slr1936 Forward -330 -314 7.04003 0.295
slr1937 Forward -229 -213 8.41667 0.29
sll0306 Reverse -313 -329 8.31834 0.29
slr0321 Forward -148 -132 8.31834 0.29
sll0296 Forward -178 -162 10.8749 0.28
slr0333 Reverse -70 -86 7.43336 0.295
sll0294 Reverse -185 -201 9.20332 0.29
sll0171 Forward -360 -344 8.71166 0.29
ssl0296 Forward -365 -349 7.04003 0.295
slr0181 Reverse -69 -85 7.04003 0.295
sll0160 Forward -107 -91 8.02334 0.29
slr0362 Forward -251 -235 7.33503 0.295
sll0350 Forward -231 -215 7.92501 0.29
slr0363 Reverse -230 -246 7.92501 0.29
sll0765 Reverse -297 -313 8.90832 0.29
slr0783 Forward -301 -285 8.90832 0.29
sll0317 Reverse -264 -280 8.41667 0.29
sll0309 Reverse -260 -276 12.6449 0.271
sll0020 Reverse -242 -258 18.0531 0.188
slr0013 Reverse -167 -183 7.82668 0.29
sll0010 Forward -284 -268 13.2349 0.271
sll0010 Reverse -264 -280 10.3833 0.29
slr0019 Reverse -178 -194 13.2349 0.271
slr0019 Forward -198 -182 10.3833 0.29
sll0006 Forward -90 -74 7.33503 0.295
sll0201 Forward -229 -213 8.41667 0.29
sll0191 Forward -53 -37 7.2367 0.295
sll0403 Forward -107 -91 10.1866 0.29
slr0439 Reverse -204 -220 10.1866 0.29
sll0072 Forward -50 -34 14.0215 0.271
slr0060 Reverse -48 -64 16.7748 0.188
slr0209 Forward -23 -7 8.515 0.29
slr0903 Forward -258 -242 11.5633 0.274
slr0913 Forward -52 -36 9.89163 0.29
slr0915 Reverse -82 -98 10.6783 0.29
ssl1045 Forward -255 -239 10.3833 0.29
slr0574 Reverse -154 -170 10.3833 0.29
slr0829 Forward -55 -39 12.4482 0.271
sll0834 Reverse -112 -128 8.41667 0.29
slr0838 Forward -367 -351 11.2683 0.274
sll0827 Forward -204 -188 14.1199 0.271
slr0841 Reverse -63 -79 14.1199 0.271
sll0086 Forward -399 -383 7.33503 0.295
slr0082 Reverse -365 -381 13.8249 0.271
slr0096 Reverse -245 -261 9.00665 0.29
sll0484 Reverse -124 -140 7.92501 0.29
sll0484 Forward -122 -106 7.13836 0.295
slr0502 Reverse -9 -25 7.13836 0.295
slr0519 Reverse -94 -110 8.515 0.29
slr0522 Forward -112 -96 12.4482 0.271
sll0597 Reverse -118 -134 21.003 0.188
slr0616 Forward -160 -144 7.53169 0.295
sll0587 Reverse -2 -18 8.22001 0.29
slr0099 Forward -17 -1 8.41667 0.29
slr0317 Reverse -27 -43 12.9399 0.271
sll0797 Reverse -85 -101 9.10498 0.29
slr0793 Forward -34 -18 9.10498 0.29
sll0792 Forward -33 -17 7.92501 0.29
slr0798 Reverse -119 -135 7.92501 0.29
slr0710 Reverse -55 -71 11.0716 0.28
ssl1263 Reverse -129 -145 8.80999 0.29
sll0745 Reverse -367 -383 11.8583 0.271
sll0739 Forward -364 -348 8.41667 0.29
sll0037 Forward -285 -269 11.4649 0.274
slr0927 Reverse -364 -380 11.1699 0.28
sll0536 Reverse -131 -147 10.285 0.29
slr0556 Reverse -153 -169 7.82668 0.29
slr0657 Reverse -69 -85 10.5799 0.29
sll0624 Forward -384 -368 11.7599 0.271
slr0662 Reverse -31 -47 11.7599 0.271
slr1566 Reverse -206 -222 10.1866 0.29
sll1470 Forward -194 -178 7.53169 0.295
slr1588 Reverse -35 -51 7.53169 0.295
slr0750 Reverse -84 -100 8.61333 0.29
slr0750 Forward -102 -86 8.515 0.29
sll0733 Reverse -156 -172 12.2516 0.271
slr0758 Reverse -38 -54 7.82668 0.29
sll0723 Forward -376 -360 8.71166 0.29
sll0451 Reverse -38 -54 11.8583 0.271
slr0458 Forward -82 -66 8.31834 0.29
slr0460 Forward -17 -1 8.41667 0.29
ssr0817 Reverse -190 -206 8.41667 0.29
slr0609 Forward -285 -269 7.13836 0.295
sll5002 Forward -24 -8 7.53169 0.295
sll5004 Reverse -206 -222 10.6783 0.29
ssl5007 Reverse -201 -217 7.04003 0.295
ssr5009 Forward -314 -298 7.04003 0.295
ssr5011 Forward -102 -86 7.2367 0.295
ssl5025 Reverse -256 -272 9.59664 0.29
sll5028 Reverse -329 -345 7.82668 0.29
slr5029 Forward -80 -64 7.82668 0.29
sll5035 Forward -136 -120 9.59664 0.29
sll5067 Forward -158 -142 7.43336 0.295
sll5079 Reverse -140 -156 9.20332 0.29
sll5083 Reverse -98 -114 7.33503 0.295
slr5085 Reverse -79 -95 7.72835 0.29
sll5086 Reverse -238 -254 10.1866 0.29
slr5087 Forward -381 -365 10.1866 0.29
slr5088 Reverse -138 -154 8.41667 0.29
ssl7004 Forward -353 -337 7.53169 0.295
slr7005 Reverse -14 -30 7.53169 0.295
ssr7036 Reverse -139 -155 7.92501 0.29
ssl7039 Reverse -89 -105 11.9566 0.271
ssr7040 Forward -29 -13 11.9566 0.271
slr7041 Forward -271 -255 11.9566 0.271
sll7044 Reverse -328 -344 7.72835 0.29
sll7063 Reverse -241 -257 8.31834 0.29
sll7078 Reverse -40 -56 9.10498 0.29
slr7080 Forward -189 -173 9.10498 0.29
sll7103 Reverse -273 -289 8.41667 0.29
slr7105 Forward -229 -213 8.41667 0.29
sll8025 Reverse -50 -66 8.02334 0.29
slr8026 Forward -86 -70 8.02334 0.29
sll8032 Forward -369 -353 12.0549 0.271
ssr6002 Reverse -201 -217 7.04003 0.295
sll6010 Reverse -79 -95 7.72835 0.29
slr6011 Forward -104 -88 7.72835 0.29
slr6051 Reverse -128 -144 7.82668 0.29
sll6060 Forward -355 -339 7.04003 0.295
ssl6061 Forward -115 -99 7.04003 0.295
ssr6062 Reverse -201 -217 7.04003 0.295
sll6069 Reverse -79 -95 7.72835 0.29
slr6070 Forward -104 -88 7.72835 0.29
slr6108 Reverse -244 -260 12.6449 0.271
sll6109 Forward -297 -281 8.12167 0.29
6803t27 Reverse -306 -322 7.82668 0.29
6803t32 Forward -359 -343 16.7748 0.188
6803t34 Reverse -27 -43 10.6783 0.29
6803t41 Forward -78 -62 10.5799 0.29
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.250  0.750  
0.875 0.000 0.000 0.125
1.000 0.000 0.000 0.000
0.375 0.000 0.125 0.500
0.125 0.000 0.000 0.875
0.000 0.000 0.000 1.000
0.000 0.250 0.000 0.750
0.375 0.375 0.000 0.250
0.125 0.000 0.000 0.875
0.000 0.000 1.000 0.000
0.625 0.250 0.000 0.125
0.250 0.750 0.000 0.000
0.250 0.625 0.000 0.125
1.000 0.000 0.000 0.000
0.875 0.000 0.125 0.000
0.750 0.250 0.000 0.000
0.125 0.000 0.000 0.875