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Details for NP_440224.1_1

Name NP_440224.1_1
Length 20
Regular expression G[AC][GT][CA][CG]TCA[ACG][AC]TGGCGATCGC
Central No

Motif logo

Genes containing this motif

346 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1494 Reverse -232 -251 -0.885524 0.152
slr1115 Forward -236 -217 11.4058 0.0566
slr1124 Forward -222 -203 2.3594 0.132
sll1049 Reverse -318 -337 12.6841 0.0566
slr1127 Reverse -318 -337 1.67108 0.132
slr1129 Reverse -7 -26 -1.08219 0.157
slr0723 Forward -140 -121 2.26107 0.132
slr0725 Reverse -128 -147 -4.03212 0.286
slr0728 Reverse -194 -213 0.58944 0.133
slr1006 Reverse -362 -381 2.55606 0.132
slr0740 Forward -128 -109 12.2908 0.0566
slr0743a Forward -159 -140 0.491109 0.133
slr0243 Reverse -95 -114 3.44104 0.132
sll0216 Reverse -324 -343 3.34271 0.132
sll1321 Reverse -153 -172 2.26107 0.132
slr1413 Forward -46 -27 2.26107 0.132
sll1041 Reverse -69 -88 -2.55715 0.224
slr1097 Forward -117 -98 0.786102 0.132
slr1101 Forward -160 -141 -0.787193 0.149
sll1686 Forward -387 -368 0.786102 0.132
ssr2972 Reverse -178 -197 0.786102 0.132
slr1773 Reverse -373 -392 0.786102 0.132
slr1777 Reverse -259 -278 12.6841 0.0566
slr1778 Forward -299 -280 -0.885524 0.152
slr1793 Reverse -339 -358 8.35759 0.0765
sll1659 Forward -99 -80 11.5042 0.0566
sll1201 Reverse -27 -46 9.0459 0.0617
slr1291 Forward -199 -180 9.0459 0.0617
sll1196 Forward -372 -353 1.0811 0.132
slr1298 Reverse -263 -282 -0.590531 0.144
sll1192 Forward -263 -244 10.3242 0.0569
sll1192 Reverse -232 -251 0.884433 0.132
ssr2153 Reverse -372 -391 10.3242 0.0569
sll1184 Reverse -211 -230 3.14605 0.132
slr0971 Forward -307 -288 9.3409 0.0598
sll0926 Forward -137 -118 2.65439 0.132
sll0924 Reverse -38 -57 -1.67217 0.181
sll0923 Forward -246 -227 -0.590531 0.144
slr0981 Reverse -350 -369 -1.08219 0.157
slr1610 Forward -20 -1 21.4356 0.0127
slr1611 Forward -184 -165 10.1275 0.0569
slr1079 Reverse -9 -28 -0.590531 0.144
sll1022 Reverse -363 -382 -3.44213 0.265
sll1021 Reverse -358 -377 7.57094 0.094
sll0656 Forward -214 -195 11.1109 0.0566
slr0682 Reverse -287 -306 11.1109 0.0566
slr1590 Forward -244 -225 1.57275 0.132
slr1591 Reverse -296 -315 12.1925 0.0566
slr1592 Reverse -266 -285 -3.54046 0.267
sll1509 Reverse -130 -149 -3.73712 0.272
slr1599 Forward -236 -217 -3.73712 0.272
slr1600 Forward -321 -302 2.26107 0.132
slr1046 Reverse -347 -366 -2.95047 0.246
ssr1736 Forward -198 -179 -0.4922 0.143
slr1760 Reverse -319 -338 0.491109 0.133
ssr3122 Reverse -276 -295 9.53756 0.0591
slr1847 Reverse -166 -185 0.58944 0.133
sll1942 Reverse -76 -95 10.7175 0.0569
slr2045 Reverse -359 -378 -3.44213 0.265
sll1933 Forward -272 -253 -0.0988766 0.14
slr1907 Forward -155 -136 6.19431 0.132
slr1918 Reverse -217 -236 -0.000545616 0.14
slr1022 Forward -186 -167 -0.197208 0.14
slr1385 Forward -287 -268 6.39097 0.127
slr1385 Forward -200 -181 2.65439 0.132
sll1291 Forward -279 -260 1.17943 0.132
slr1395 Reverse -374 -393 1.0811 0.132
slr1396 Forward -361 -342 2.45773 0.132
sll1285 Forward -48 -29 0.491109 0.133
sll1283 Reverse -184 -203 5.99764 0.132
sll1583 Reverse -336 -355 0.884433 0.132
sll1583 Forward -367 -348 -3.93378 0.282
slr1703 Reverse -172 -191 -3.14714 0.254
slr2012 Forward -257 -238 8.25926 0.0783
slr2013 Reverse -285 -304 -0.197208 0.14
slr2026 Reverse -308 -327 3.04771 0.132
slr2027 Reverse -61 -80 2.55606 0.132
slr2030 Reverse -146 -165 0.491109 0.133
sll1078 Reverse -6 -25 -0.688862 0.146
ssl3446 Reverse -63 -82 3.6377 0.132
ssl3446 Forward -94 -75 -0.000545616 0.14
sll1820 Forward -366 -347 -0.0988766 0.14
sll1812 Forward -162 -143 3.34271 0.132
sll1801 Reverse -270 -289 1.0811 0.132
slr1898 Forward -21 -2 1.37609 0.132
slr1900 Reverse -322 -341 7.66927 0.0928
sll1789 Reverse -51 -70 -3.04881 0.25
sll1123 Reverse -330 -349 -0.197208 0.14
sll1120 Forward -109 -90 0.0977854 0.139
slr1200 Reverse -369 -388 0.982764 0.132
slr1207 Forward -264 -245 0.392778 0.135
slr1207 Reverse -233 -252 -0.000545616 0.14
slr1212 Forward -175 -156 -3.93378 0.282
sll1968 Reverse -319 -338 -1.27885 0.166
ssl3335 Forward -283 -264 1.17943 0.132
sll1740 Reverse -147 -166 -3.14714 0.254
slr1535 Reverse -280 -299 -1.27885 0.166
slr1549 Reverse -259 -278 0.884433 0.132
slr1218 Forward -394 -375 -3.24547 0.257
sll1142 Forward -342 -323 -0.590531 0.144
slr1225 Forward -136 -117 -1.57384 0.178
slr1227 Forward -115 -96 -3.3438 0.26
slr1240 Reverse -91 -110 2.45773 0.132
slr1240 Reverse -316 -335 -1.7705 0.184
slr1440 Reverse -222 -241 1.96607 0.132
sll1354 Reverse -212 -231 -1.47551 0.175
slr1365 Forward -229 -210 2.55606 0.132
sll1268 Reverse -246 -265 0.196116 0.139
sll1268 Reverse -202 -221 -0.0988766 0.14
slr0879 Reverse -266 -285 -0.197208 0.14
sll0862 Reverse -84 -103 -1.86883 0.189
sll1308 Forward -176 -157 0.884433 0.132
slr1406 Reverse -216 -235 0.884433 0.132
sll1783 Forward -190 -171 3.14605 0.132
slr1852 Reverse -294 -313 3.14605 0.132
sll1773 Reverse -226 -245 -1.08219 0.157
sll1767 Forward -246 -227 -3.14714 0.254
slr1877 Reverse -59 -78 -3.14714 0.254
sll1757 Forward -258 -239 1.76941 0.132
slr1887 Reverse -119 -138 -2.26216 0.206
slr2136 Reverse -171 -190 19.9606 0.0127
slr2136 Forward -202 -183 -0.295539 0.141
sll1708 Forward -289 -270 0.0977854 0.139
sll1630 Reverse -84 -103 -3.73712 0.272
sll1625 Reverse -155 -174 -0.197208 0.14
sll1620 Reverse -368 -387 9.53756 0.0591
slr1740 Forward -373 -354 9.53756 0.0591
slr1742 Forward -328 -309 3.04771 0.132
slr1744 Forward -263 -244 10.1275 0.0569
slr1746 Reverse -166 -185 11.6025 0.0566
sll0858 Forward -129 -110 3.44104 0.132
sll0849 Forward -342 -323 -0.197208 0.14
sll0839 Forward -95 -76 -1.7705 0.184
sll0839 Forward -127 -108 -2.36049 0.211
sll0838 Forward -274 -255 5.60432 0.132
slr1254 Forward -138 -119 1.57275 0.132
slr1259 Forward -316 -297 -0.39387 0.141
slr2004 Forward -322 -303 9.83255 0.0591
ssr2898 Forward -211 -192 7.96426 0.0855
sll1595 Reverse -141 -160 5.30933 0.132
slr1726 Forward -282 -263 5.30933 0.132
slr0264 Forward -187 -168 2.26107 0.132
slr0272 Reverse -284 -303 -0.688862 0.146
sll0236 Reverse -92 -111 0.491109 0.133
slr2082 Forward -138 -119 0.884433 0.132
slr2082 Reverse -107 -126 -0.39387 0.141
sll1987 Reverse -276 -295 4.03102 0.132
sll1987 Forward -307 -288 1.27776 0.132
sll1982 Forward -141 -122 -4.32711 0.297
slr2092 Reverse -122 -141 -4.32711 0.297
slr2101 Forward -365 -346 3.83436 0.132
sll1973 Forward -246 -227 -0.4922 0.143
sll1973 Reverse -364 -383 -1.37718 0.169
sll1414 Forward -198 -179 0.294447 0.136
slr1517 Reverse -112 -131 0.786102 0.132
slr2121 Forward -359 -340 0.392778 0.135
slr2124 Forward -65 -46 -2.75381 0.236
slr2131 Forward -56 -37 4.71934 0.132
slr1324 Reverse -157 -176 12.8808 0.0566
slr0806 Forward -284 -265 0.294447 0.136
sll0817 Reverse -11 -30 -3.44213 0.265
slr0813 Reverse -336 -355 -0.39387 0.141
sll1258 Reverse -38 -57 1.76941 0.132
slr1347 Reverse -276 -295 2.26107 0.132
ssl3580 Reverse -195 -214 -1.57384 0.178
sll1899 Forward -219 -200 3.83436 0.132
slr1979 Forward -65 -46 -4.32711 0.297
sll1875 Reverse -186 -205 -4.03212 0.286
sll1380 Reverse -117 -136 2.3594 0.132
slr1476 Forward -92 -73 2.3594 0.132
sll1377 Forward -363 -344 -3.73712 0.272
sll1180 Reverse -47 -66 0.786102 0.132
slr1265 Forward -313 -294 0.786102 0.132
sll1178 Reverse -181 -200 8.75091 0.0671
slr1272 Forward -117 -98 -0.885524 0.152
sll1172 Reverse -164 -183 0.58944 0.133
slr1279 Forward -119 -100 0.58944 0.133
sll1442 Reverse -162 -181 2.55606 0.132
sll1442 Forward -193 -174 -0.4922 0.143
ssl2162 Forward -248 -229 -1.57384 0.178
sll1103 Reverse -249 -268 0.687771 0.132
ssl2148 Forward -157 -138 -0.295539 0.141
slr1164 Reverse -145 -164 -0.295539 0.141
sll1566 Forward -211 -192 -3.83545 0.278
slr1670 Reverse -136 -155 -0.000545616 0.14
slr1674 Reverse -155 -174 -0.590531 0.144
ssr2806 Reverse -28 -47 0.0977854 0.139
sll1557 Reverse -295 -314 1.67108 0.132
slr0936 Reverse -117 -136 -1.67217 0.181
slr0936 Forward -134 -115 -3.54046 0.267
slr0959 Forward -371 -352 1.96607 0.132
ssr2723 Forward -328 -309 2.75272 0.132
sll1528 Reverse -178 -197 9.14423 0.0617
slr1645 Reverse -328 -347 3.34271 0.132
ssr2754 Reverse -196 -215 -0.197208 0.14
sll1521 Reverse -363 -382 -1.96717 0.192
sll0426 Forward -345 -326 1.96607 0.132
sll0268 Forward -396 -377 19.6656 0.0127
sll0266 Forward -166 -147 1.37609 0.132
sll0264 Reverse -45 -64 -4.03212 0.286
sll0359 Reverse -364 -383 -3.24547 0.257
ssr0657 Reverse -359 -378 0.786102 0.132
slr0150 Reverse -283 -302 -2.85214 0.241
sll0148 Forward -40 -21 18.7807 0.0138
sll0135 Reverse -94 -113 -4.13045 0.29
slr1928 Reverse -337 -356 -0.295539 0.141
sll1854 Reverse -311 -330 2.0644 0.132
slr0325 Reverse -331 -350 1.96607 0.132
sll0297 Reverse -82 -101 0.786102 0.132
ssl0563 Forward -271 -252 1.86774 0.132
slr0331 Reverse -98 -117 1.86774 0.132
sll0157 Reverse -102 -121 1.76941 0.132
sll0154 Forward -301 -282 6.78429 0.116
sml0001 Forward -212 -193 10.2259 0.0569
slr0376 Forward -342 -323 0.982764 0.132
sll0329 Forward -144 -125 1.86774 0.132
slr0387 Forward -145 -126 3.34271 0.132
slr0388 Forward -96 -77 1.76941 0.132
sll0771 Reverse -219 -238 6.98095 0.112
slr0774 Forward -79 -60 6.98095 0.112
slr0776 Forward -190 -171 2.45773 0.132
sll0764 Reverse -269 -288 11.7992 0.0566
sll0762 Reverse -178 -197 -2.55715 0.224
sll0757 Forward -347 -328 0.982764 0.132
slr0780 Reverse -173 -192 0.982764 0.132
slr0343 Forward -211 -192 2.55606 0.132
slr0350 Forward -344 -325 2.26107 0.132
slr0354 Reverse -255 -274 -4.13045 0.29
slr0357 Forward -190 -171 -3.63879 0.267
slr0358 Reverse -174 -193 0.982764 0.132
slr0001 Forward -233 -214 -0.590531 0.144
sll0020 Forward -303 -284 12.0942 0.0566
sll0017 Forward -344 -325 -2.85214 0.241
slr0008 Reverse -264 -283 0.687771 0.132
sll0006 Forward -370 -351 10.1275 0.0569
sll0002 Forward -261 -242 -1.08219 0.157
slr0213 Reverse -276 -295 -1.08219 0.157
slr0222 Reverse -312 -331 -4.03212 0.286
slr0224 Forward -157 -138 0.786102 0.132
sll0410 Reverse -137 -156 1.37609 0.132
sll0406 Forward -255 -236 1.47442 0.132
slr0440 Forward -143 -124 18.7807 0.0138
sll0461 Forward -202 -183 3.44104 0.132
slr0473 Reverse -253 -272 3.44104 0.132
slr0476 Reverse -240 -259 2.94938 0.132
slr0477 Reverse -329 -348 1.0811 0.132
slr0488 Reverse -253 -272 1.67108 0.132
slr0489 Reverse -142 -161 -1.37718 0.169
sll0681 Forward -66 -47 -1.7705 0.184
sll0613 Reverse -54 -73 2.3594 0.132
slr0633 Forward -148 -129 2.3594 0.132
sll0606 Forward -108 -89 -0.197208 0.14
slr0644 Reverse -9 -28 -0.197208 0.14
slr0644 Reverse -369 -388 -1.86883 0.189
slr0650 Reverse -253 -272 0.687771 0.132
slr0417 Reverse -371 -390 0.687771 0.132
sll0370 Reverse -144 -163 -3.04881 0.25
sll0185 Reverse -158 -177 -0.688862 0.146
sll0178 Reverse -120 -139 12.8808 0.0566
ssr1528 Forward -373 -354 11.7008 0.0566
slr0905 Reverse -61 -80 -3.63879 0.267
slr0909 Forward -158 -139 1.76941 0.132
slr0915 Forward -395 -376 0.294447 0.136
sll0891 Reverse -340 -359 -4.22878 0.292
ssl1690 Reverse -263 -282 -3.54046 0.267
ssl1690 Reverse -84 -103 -4.22878 0.292
slr0921 Forward -120 -101 -3.54046 0.267
slr0921 Forward -299 -280 -4.22878 0.292
ssr1398 Reverse -331 -350 0.982764 0.132
slr0827 Reverse -295 -314 -4.13045 0.29
slr0839 Forward -233 -214 -3.3438 0.26
slr0072 Reverse -206 -225 11.6025 0.0566
sll0080 Forward -341 -322 4.71934 0.132
sll0487 Forward -367 -348 2.94938 0.132
slr0509 Reverse -333 -352 -0.983855 0.156
slr0516 Reverse -170 -189 1.17943 0.132
sll0596 Forward -377 -358 0.786102 0.132
sll0596 Reverse -346 -365 -3.3438 0.26
sll0595 Forward -325 -306 5.89931 0.132
sll0590 Reverse -199 -218 1.96607 0.132
sll0590 Forward -230 -211 -0.39387 0.141
slr0618 Forward -52 -33 1.96607 0.132
slr0618 Reverse -21 -40 -0.39387 0.141
sll0585 Reverse -209 -228 3.93269 0.132
slr0625 Forward -252 -233 0.786102 0.132
slr0099 Forward -330 -311 1.86774 0.132
sll0108 Reverse -378 -397 9.53756 0.0591
sll0101 Reverse -147 -166 2.94938 0.132
slr0301 Reverse -287 -306 9.63589 0.0591
sll0281 Reverse -156 -175 -0.4922 0.143
slr0794 Reverse -118 -137 0.884433 0.132
slr0698 Forward -51 -32 0.392778 0.135
slr0527 Forward -253 -234 1.67108 0.132
slr0527 Reverse -222 -241 0.687771 0.132
sll0501 Forward -129 -110 -0.197208 0.14
slr0541 Reverse -73 -92 -0.197208 0.14
sll1344 Forward -252 -233 6.68596 0.119
sll1341 Reverse -92 -111 -3.54046 0.267
slr1431 Forward -273 -254 1.0811 0.132
slr1456 Reverse -140 -159 1.86774 0.132
slr1459 Reverse -268 -287 10.9142 0.0569
sll1498 Forward -337 -318 2.16274 0.132
sll1496 Forward -188 -169 0.0977854 0.139
slr1560 Reverse -339 -358 -1.18052 0.162
slr1565 Reverse -58 -77 0.786102 0.132
sll1489 Reverse -178 -197 0.0977854 0.139
slr1573 Reverse -313 -332 -2.26216 0.206
slr0755 Forward -218 -199 3.24438 0.132
sll0726 Forward -351 -332 3.24438 0.132
slr1653 Reverse -317 -336 -1.96717 0.192
ssr2781 Reverse -114 -133 -1.86883 0.189
sll0446 Reverse -184 -203 1.57275 0.132
slr0453 Forward -99 -80 -3.14714 0.254
sll0564 Reverse -198 -217 1.76941 0.132
slr0598 Forward -259 -240 -3.63879 0.267
slr0599 Forward -189 -170 1.76941 0.132
slr0605 Forward -77 -58 2.85105 0.132
sll5002 Reverse -300 -319 -0.590531 0.144
ssl5007 Reverse -246 -265 2.0644 0.132
ssr5009 Forward -269 -250 2.0644 0.132
ssl5015 Reverse -137 -156 2.16274 0.132
ssl5015 Forward -168 -149 -0.787193 0.149
slr5021 Forward -129 -110 -0.295539 0.141
ssl5027 Reverse -303 -322 2.85105 0.132
ssl5045 Reverse -284 -303 -3.44213 0.265
slr5058 Reverse -270 -289 -1.96717 0.192
sll5061 Reverse -278 -297 -3.63879 0.267
ssl5065 Reverse -81 -100 -3.04881 0.25
ssl5091 Reverse -246 -265 2.3594 0.132
ssr5092 Forward -126 -107 2.3594 0.132
ssl5095 Reverse -245 -264 -0.000545616 0.14
ssl5099 Reverse -318 -337 0.687771 0.132
slr5101 Forward -257 -238 0.687771 0.132
sll5104 Reverse -144 -163 -3.3438 0.26
slr5105 Forward -246 -227 -3.3438 0.26
ssr5121 Reverse -348 -367 -0.39387 0.141
sll7065 Reverse -82 -101 5.60432 0.132
sll7078 Reverse -290 -309 2.85105 0.132
sll7078 Forward -321 -302 1.17943 0.132
ssl8003 Forward -197 -178 -1.7705 0.184
sll8007 Forward -55 -36 19.6656 0.0127
ssl8010 Reverse -214 -233 1.37609 0.132
ssl8024 Reverse -183 -202 0.786102 0.132
sll8033 Forward -147 -128 -4.13045 0.29
slr8037 Forward -376 -357 0.196116 0.139
sll8048 Forward -223 -204 24.6805 0.0111
ssr6002 Reverse -246 -265 2.3594 0.132
ssr6032 Reverse -121 -140 -3.63879 0.267
slr6033 Reverse -140 -159 -3.63879 0.267
sll6036 Forward -246 -227 -2.0655 0.195
slr6037 Reverse -148 -167 -2.0655 0.195
slr6042 Forward -186 -167 -0.295539 0.141
slr6044 Forward -221 -202 1.37609 0.132
sll6059 Forward -294 -275 0.0977854 0.139
sll6060 Forward -310 -291 2.3594 0.132
ssl6061 Forward -70 -51 2.3594 0.132
ssr6062 Reverse -246 -265 2.3594 0.132
slr6097 Forward -159 -140 -3.83545 0.278
ssr6099 Forward -204 -185 11.7992 0.0566
6803t01 Reverse -150 -169 2.94938 0.132
6803t04 Reverse -180 -199 -0.885524 0.152
6803t05 Forward -62 -43 -1.67217 0.181
6803t05 Forward -224 -205 -2.0655 0.195
6803t09 Forward -99 -80 1.17943 0.132
6803t13 Forward -184 -165 9.43923 0.0591
6803t13 Forward -152 -133 -3.63879 0.267
6803t16 Forward -173 -154 -4.13045 0.29
6803t18 Forward -191 -172 -3.04881 0.25
6803t19 Forward -350 -331 -0.688862 0.146
6803t25 Reverse -272 -291 2.75272 0.132
6803t34 Forward -340 -321 0.294447 0.136
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.500 0.333 0.000 0.167
0.000 0.000 0.500 0.500
0.333 0.667 0.000 0.000
0.000 0.667 0.333 0.000
0.000 0.000 0.000 1.000
0.000 1.000 0.000 0.000
0.667 0.167 0.167 0.000
0.333 0.333 0.333 0.000
0.500 0.500 0.000 0.000
0.167 0.000 0.000 0.833
0.167 0.167 0.667 0.000
0.000 0.000 1.000 0.000
0.000 0.833 0.167 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.833 0.000 0.167
0.000 0.000 1.000 0.000
0.167 0.833 0.000 0.000