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Details for NP_440184.1_7

Name NP_440184.1_7
Length 20
Regular expression [AC][TC][TG][TA]TT[AGT][TA]A[AG][TCG][CG]TT[TC][TG][TAG]T[CA][AG]
Central Yes

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Genes containing this motif

108 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1400 Reverse -57 -76 14.6558 0.277
sll1396 Forward -95 -76 15.6107 0.222
slr1498 Reverse -311 -330 15.6107 0.222
sll1062 Reverse -1 -20 14.5603 0.277
sll0716 Reverse -176 -195 15.3242 0.228
slr0721 Forward -27 -8 15.3242 0.228
sll0704 Reverse -47 -66 13.6054 0.28
slr0732 Forward -129 -110 13.6054 0.28
slr1097 Reverse -13 -32 14.8467 0.268
slr1104 Reverse -251 -270 13.5099 0.28
slr1788 Forward -203 -184 16.4701 0.187
sll1201 Forward -190 -171 13.4144 0.28
slr1291 Reverse -36 -55 13.4144 0.28
slr1303 Reverse -190 -209 14.8467 0.268
sll1184 Forward -64 -45 15.7062 0.222
slr1307 Reverse -71 -90 15.7062 0.222
slr0975 Forward -269 -250 14.1783 0.28
slr1068 Reverse -201 -220 13.6054 0.28
sll1017 Reverse -84 -103 14.6558 0.277
slr1400 Forward -158 -139 14.6558 0.277
slr1041 Reverse -341 -360 14.4648 0.28
slr1046 Forward -258 -239 16.5656 0.182
slr1759 Forward -51 -32 14.1783 0.28
sll1751 Forward -38 -19 16.1836 0.211
slr2036 Reverse -58 -77 13.5099 0.28
ssr1720 Reverse -168 -187 17.234 0.152
sll1574 Forward -187 -168 13.7008 0.28
slr2025 Reverse -229 -248 15.8016 0.222
slr1138 Forward -173 -154 13.3189 0.28
sll1803 Reverse -27 -46 13.2234 0.286
ssr2009 Forward -215 -196 18.1889 0.119
ssr2016 Reverse -108 -127 15.3242 0.228
slr2073 Reverse -275 -294 13.3189 0.28
sll1464 Reverse -283 -302 16.2791 0.205
sll1633 Reverse -90 -109 13.9873 0.28
ssr2062 Forward -46 -27 14.8467 0.268
ssl2598 Reverse -28 -47 20.4807 0.0562
smr0009 Forward -58 -39 20.4807 0.0562
sll1780 Reverse -59 -78 13.5099 0.28
slr1863 Forward -43 -24 13.5099 0.28
sll1771 Forward -94 -75 16.9475 0.168
sll1769 Reverse -346 -365 17.7115 0.119
ssl3383 Reverse -64 -83 17.7115 0.119
sll1158 Forward -298 -279 14.0828 0.28
slr1986 Forward -59 -40 15.1332 0.239
sll1427 Reverse -379 -398 13.3189 0.28
sll1418 Reverse -236 -255 15.8016 0.222
ssr2554 Reverse -315 -334 16.852 0.171
sll1997 Reverse -59 -78 13.5099 0.28
slr2110 Forward -137 -118 13.5099 0.28
sll1994 Reverse -29 -48 18.5709 0.119
slr2130 Forward -382 -363 18.5709 0.119
sll1237 Reverse -308 -327 13.6054 0.28
slr1330 Reverse -250 -269 13.4144 0.28
sll1220 Reverse -305 -324 13.7963 0.28
slr1334 Reverse -150 -169 13.3189 0.28
sll0810 Forward -303 -284 13.6054 0.28
sll1255 Reverse -59 -78 13.5099 0.28
slr1163 Forward -304 -285 14.6558 0.277
sll1091 Forward -140 -121 13.4144 0.28
slr1167 Reverse -242 -261 13.4144 0.28
ssl3044 Forward -312 -293 13.5099 0.28
slr1694 Reverse -107 -126 13.3189 0.28
slr1623 Forward -117 -98 13.4144 0.28
sll1535 Reverse -153 -172 15.4197 0.228
sll1532 Forward -308 -289 13.5099 0.28
ssl2982 Forward -64 -45 13.5099 0.28
slr1635 Reverse -59 -78 13.5099 0.28
slr0287 Reverse -112 -131 17.616 0.12
slr0288 Forward -169 -150 18.3799 0.119
sll0354 Reverse -103 -122 13.2234 0.286
slr0406 Forward -378 -359 13.2234 0.286
slr0147 Reverse -282 -301 15.3242 0.228
sll1862 Reverse -62 -81 14.4648 0.28
sll0297 Forward -161 -142 18.2844 0.119
sll0177 Forward -30 -11 17.9024 0.119
slr0180 Reverse -59 -78 13.5099 0.28
slr0345 Forward -60 -41 15.1332 0.239
sll0315 Reverse -59 -78 13.5099 0.28
slr0353 Forward -65 -46 13.5099 0.28
slr0650 Forward -114 -95 19.4303 0.116
slr0650 Reverse -35 -54 16.5656 0.182
sll0544 Reverse -92 -111 13.3189 0.28
slr0572 Forward -322 -303 13.3189 0.28
sll0102 Reverse -170 -189 17.807 0.119
slr0105 Forward -176 -157 17.807 0.119
sll0775 Reverse -82 -101 14.5603 0.277
ssr1169 Forward -141 -122 14.5603 0.277
sll0503 Forward -149 -130 13.3189 0.28
slr1420 Forward -63 -44 16.6611 0.182
slr1565 Reverse -141 -160 18.0934 0.119
slr1568 Reverse -115 -134 17.1385 0.154
sll1477 Forward -255 -236 13.3189 0.28
sll1474 Reverse -59 -78 13.5099 0.28
ssl1378 Reverse -16 -35 15.2287 0.236
sll0723 Forward -280 -261 14.3693 0.28
sll0721 Reverse -255 -274 13.4144 0.28
slr1660 Forward -283 -264 13.3189 0.28
sll0451 Reverse -113 -132 14.3693 0.28
slr0452 Forward -248 -229 15.7062 0.222
sll1108 Reverse -223 -242 15.7062 0.222
slr1181 Forward -234 -215 15.7062 0.222
slr1188 Reverse -105 -124 13.8918 0.28
slr0601 Reverse -237 -256 13.4144 0.28
sll5131 Reverse -59 -78 13.5099 0.28
slr7008 Reverse -59 -78 13.5099 0.28
slr8045 Forward -330 -311 15.4197 0.228
slr6045 Reverse -87 -106 15.6107 0.222
slr6105 Reverse -59 -78 13.5099 0.28
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.474  0.368  0.158  0.000  
0.000 0.211 0.105 0.684
0.000 0.158 0.211 0.632
0.263 0.158 0.000 0.579
0.000 0.000 0.000 1.000
0.053 0.053 0.053 0.842
0.316 0.105 0.316 0.263
0.421 0.000 0.000 0.579
0.895 0.000 0.000 0.105
0.684 0.105 0.211 0.000
0.105 0.263 0.211 0.421
0.158 0.474 0.316 0.053
0.053 0.000 0.000 0.947
0.000 0.105 0.000 0.895
0.000 0.316 0.000 0.684
0.000 0.053 0.316 0.632
0.211 0.000 0.211 0.579
0.105 0.105 0.105 0.684
0.421 0.526 0.053 0.000
0.737 0.000 0.263 0.000