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Details for NP_440184.1_5

Name NP_440184.1_5
Length 20
Regular expression GG[TC][GC][AG][AG]C[GC][CG]TGG[CG]G[AT][TC][TC][GC]G[CA]
Central Yes

Motif logo

Genes containing this motif

85 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1060 Reverse -233 -252 11.7008 0.143
ssl2069 Reverse -46 -65 11.7008 0.143
ssr1853 Forward -223 -204 11.7008 0.143
slr0741 Reverse -378 -397 5.30933 0.241
slr0744 Reverse -305 -324 9.73422 0.178
ssl0426 Reverse -279 -298 5.80098 0.241
slr0242 Reverse -311 -330 4.03102 0.253
slr0252 Forward -301 -282 13.7658 0.143
sll1664 Forward -324 -305 6.29264 0.224
sll0645 Reverse -230 -249 4.03102 0.253
slr2053 Forward -231 -212 7.07928 0.224
slr1909 Reverse -27 -46 9.3409 0.189
sll1831 Forward -319 -300 8.65258 0.193
sll1581 Reverse -310 -329 6.4893 0.224
sll1581 Reverse -368 -387 3.93269 0.253
slr1702 Forward -167 -148 6.4893 0.224
slr1702 Forward -109 -90 3.93269 0.253
sll1568 Reverse -52 -71 13.5691 0.143
slr2026 Reverse -309 -328 5.01433 0.242
sll1797 Reverse -335 -354 8.25926 0.201
sll1797 Reverse -272 -291 3.44104 0.271
sll1726 Reverse -287 -306 5.89931 0.241
slr1844 Forward -229 -210 3.14605 0.283
sll1632 Reverse -291 -310 3.93269 0.253
slr1236 Reverse -1 -20 7.57094 0.224
slr1435 Forward -146 -127 14.4541 0.143
slr1363 Forward -302 -283 4.22769 0.253
ssr3184 Forward -266 -247 5.30933 0.241
slr1885 Forward -78 -59 9.14423 0.191
sll1692 Forward -232 -213 6.39097 0.224
slr1819 Reverse -263 -282 6.39097 0.224
slr1736 Forward -231 -212 7.96426 0.213
slr1738 Forward -396 -377 9.93088 0.178
ssl2296 Reverse -310 -329 10.3242 0.174
sll1606 Forward -194 -175 5.40766 0.241
sll1595 Forward -165 -146 5.11266 0.242
slr1726 Reverse -258 -277 5.11266 0.242
sll1430 Reverse -93 -112 13.8641 0.143
sll1994 Reverse -166 -185 7.07928 0.224
slr2130 Forward -245 -226 7.07928 0.224
ssr2194 Forward -309 -290 5.211 0.242
sll1231 Reverse -316 -335 4.12936 0.253
ssl2420 Forward -304 -285 3.6377 0.261
sll1892 Forward -302 -283 23.8939 0.0191
slr1968 Reverse -225 -244 4.71934 0.249
slr1269 Forward -197 -178 5.01433 0.242
sll1172 Forward -354 -335 4.42435 0.252
slr1279 Forward -374 -355 6.29264 0.224
slr1280 Reverse -363 -382 4.42435 0.252
sll1087 Reverse -240 -259 5.70265 0.241
slr0943 Forward -376 -357 5.89931 0.241
slr0945 Reverse -331 -350 4.62101 0.252
sll0421 Forward -228 -209 8.65258 0.193
slr0322 Forward -148 -129 3.04771 0.287
sll0166 Forward -240 -221 5.70265 0.241
slr0380 Forward -80 -61 4.916 0.242
sll0021 Reverse -235 -254 6.39097 0.224
slr0011 Reverse -262 -281 3.34271 0.275
slr0220 Forward -377 -358 4.52268 0.252
sll0204 Forward -278 -259 6.88262 0.224
slr0222 Reverse -313 -332 17.5024 0.111
sll0067 Reverse -124 -143 3.24438 0.279
slr0492 Forward -280 -261 5.50599 0.241
slr0634 Forward -75 -56 8.75091 0.193
sll0603 Reverse -341 -360 5.40766 0.241
sll0542 Forward -288 -269 3.73603 0.257
sll0829 Forward -352 -333 3.83436 0.253
slr0088 Reverse -37 -56 3.83436 0.253
sll0094 Forward -293 -274 6.29264 0.224
slr0114 Reverse -332 -351 3.93269 0.253
sll0284 Reverse -26 -45 12.0942 0.143
slr0316 Reverse -104 -123 10.2259 0.174
slr0698 Forward -50 -31 8.25926 0.201
sll0048 Forward -236 -217 5.40766 0.241
slr0022 Reverse -216 -235 5.40766 0.241
slr0926 Reverse -112 -131 4.81767 0.245
slr1457 Reverse -311 -330 6.88262 0.224
slr1556 Reverse -263 -282 6.39097 0.224
sll1479 Forward -316 -297 3.83436 0.253
slr0752 Forward -191 -172 12.8808 0.143
slr0755 Reverse -188 -207 15.4374 0.143
slr1653 Reverse -108 -127 7.07928 0.224
sll1550 Reverse -267 -286 4.03102 0.253
slr1658 Reverse -62 -81 11.7992 0.143
slr0457 Reverse -353 -372 11.1109 0.156
sll0569 Forward -359 -340 4.42435 0.252
sll7031 Forward -298 -279 7.47261 0.224
slr7095 Forward -124 -105 4.916 0.242
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.889  0.111  
0.000 0.111 0.889 0.000
0.000 0.333 0.000 0.667
0.000 0.222 0.778 0.000
0.667 0.000 0.333 0.000
0.667 0.000 0.333 0.000
0.000 1.000 0.000 0.000
0.111 0.222 0.556 0.111
0.000 0.556 0.444 0.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.778 0.222 0.000
0.000 0.000 1.000 0.000
0.667 0.111 0.000 0.222
0.000 0.444 0.000 0.556
0.000 0.333 0.000 0.667
0.111 0.222 0.667 0.000
0.000 0.000 1.000 0.000
0.222 0.667 0.111 0.000