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Details for NP_440171.1_3

Name NP_440171.1_3
Length 20
Regular expression CGGGG[GT][GC]A[AC][TA][AG]CGGG[AGT][CG]G[GC][AT]
Central No

Motif logo

Genes containing this motif

330 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1409 Forward -242 -223 2.94938 0.284
sll1405 Forward -167 -148 4.12936 0.284
sll1405 Forward -169 -150 3.73603 0.284
slr1485 Reverse -202 -221 4.81767 0.284
slr1494 Reverse -23 -42 4.12936 0.284
slr1113 Forward -76 -57 4.42435 0.284
sll1056 Forward -195 -176 21.8289 0.095
sll1056 Reverse -212 -231 3.53937 0.284
sll1056 Forward -186 -167 1.47442 0.294
sll1054 Forward -122 -103 3.53937 0.284
sll0716 Forward -398 -379 3.83436 0.284
sll0711 Reverse -7 -26 4.916 0.284
slr0730 Forward -361 -342 3.14605 0.284
sll0698 Reverse -228 -247 3.44104 0.284
slr0742 Forward -84 -65 1.37609 0.294
slr0743a Forward -254 -235 13.4708 0.177
slr0240 Reverse -158 -177 11.5042 0.209
ssr0390 Forward -287 -268 1.17943 0.294
sll1326 Forward -206 -187 2.45773 0.287
sll1325 Forward -138 -119 1.27776 0.294
slr1414 Forward -371 -352 3.83436 0.284
slr1414 Forward -200 -181 3.04771 0.284
slr1105 Forward -354 -335 1.76941 0.293
sll1680 Forward -380 -361 1.47442 0.294
sll1677 Forward -189 -170 11.3075 0.209
slr1795 Reverse -283 -302 5.40766 0.284
sll1658 Reverse -249 -268 5.01433 0.284
slr1799 Forward -360 -341 13.5691 0.177
sll1200 Reverse -333 -352 1.76941 0.293
sll1198 Reverse -266 -285 12.4875 0.177
ssl2384 Reverse -82 -101 12.4875 0.177
slr1300 Reverse -128 -147 5.30933 0.284
sll1192 Forward -112 -93 20.1573 0.095
slr1305 Forward -268 -249 14.6508 0.177
ssr1604 Reverse -107 -126 3.44104 0.284
slr0962 Forward -85 -66 5.01433 0.284
sll0932 Forward -140 -121 6.19431 0.268
slr0983 Forward -87 -68 5.80098 0.284
slr0984 Reverse -298 -317 4.52268 0.284
slr1081 Reverse -37 -56 10.3242 0.224
sll1020 Reverse -200 -219 9.73422 0.237
slr0677 Reverse -54 -73 2.55606 0.285
slr0679 Reverse -43 -62 2.94938 0.284
slr1595 Reverse -344 -363 4.52268 0.284
sll1502 Reverse -20 -39 15.5357 0.137
ssr2708 Forward -202 -183 15.5357 0.137
slr1608 Forward -164 -145 5.50599 0.284
sll1501 Reverse -204 -223 1.67108 0.294
slr1046 Forward -316 -297 3.53937 0.284
slr1046 Forward -370 -351 1.86774 0.293
slr1048 Forward -79 -60 2.65439 0.285
sll1011 Forward -199 -180 5.50599 0.284
slr1050 Reverse -125 -144 5.50599 0.284
sll1001 Forward -77 -58 7.17762 0.259
slr1761 Reverse -92 -111 2.55606 0.285
slr1763 Reverse -92 -111 4.81767 0.284
sll1635 Reverse -103 -122 9.83255 0.236
slr1847 Reverse -313 -332 1.47442 0.294
ssr3129 Forward -247 -228 7.17762 0.259
slr2034 Forward -206 -187 1.27776 0.294
slr2045 Reverse -356 -375 4.12936 0.284
slr2049 Forward -137 -118 2.94938 0.284
slr2049 Reverse -343 -362 2.55606 0.285
slr1907 Reverse -156 -175 1.47442 0.294
sll1837 Forward -342 -323 4.42435 0.284
sll1830 Reverse -38 -57 7.66927 0.259
slr1919 Forward -109 -90 7.66927 0.259
sll0994 Forward -291 -272 4.22769 0.284
sll0990 Reverse -170 -189 2.3594 0.287
sll0986 Forward -296 -277 9.43923 0.248
slr1385 Forward -152 -133 2.26107 0.288
slr1391 Reverse -201 -220 6.98095 0.259
sll1584 Forward -369 -350 2.45773 0.287
sll1572 Reverse -361 -380 6.29264 0.265
slr2010 Forward -74 -55 1.57275 0.294
slr2019 Reverse -303 -322 4.22769 0.284
slr2019 Reverse -301 -320 2.65439 0.285
slr2023 Forward -258 -239 1.27776 0.294
slr1145 Reverse -176 -195 6.29264 0.265
slr1146 Reverse -334 -353 2.0644 0.289
sll1072 Reverse -125 -144 6.78429 0.259
ssl2084 Reverse -64 -83 10.4225 0.224
sll1068 Forward -170 -151 2.55606 0.285
slr1890 Reverse -243 -262 2.55606 0.285
sll1811 Reverse -357 -376 5.30933 0.284
ssl3436 Reverse -177 -196 7.27595 0.259
sll1792 Reverse -297 -316 1.17943 0.294
ssl2233 Forward -249 -230 1.17943 0.294
slr1207 Reverse -209 -228 2.85105 0.285
sll1969 Reverse -231 -250 3.24438 0.284
sll1968 Reverse -349 -368 3.04771 0.284
sll1746 Reverse -63 -82 1.67108 0.294
slr1826 Forward -355 -336 4.62101 0.284
sll1466 Forward -131 -112 2.16274 0.288
sll1463 Reverse -309 -328 7.57094 0.259
sll1142 Forward -71 -52 2.94938 0.284
slr1223 Reverse -6 -25 2.94938 0.284
ssr2060 Forward -304 -285 3.14605 0.284
sll1281 Forward -379 -360 1.37609 0.294
slr1363 Reverse -283 -302 1.27776 0.294
slr1364 Reverse -187 -206 2.16274 0.288
slr1368 Forward -57 -38 2.55606 0.285
slr1368 Reverse -55 -74 2.16274 0.288
sll0872 Forward -319 -300 2.3594 0.287
sll1316 Forward -300 -281 1.27776 0.294
smr0009 Reverse -269 -288 1.27776 0.294
slr1853 Forward -340 -321 3.53937 0.284
slr1867 Reverse -155 -174 1.27776 0.294
ssl3379 Reverse -162 -181 2.3594 0.287
sll2015 Reverse -195 -214 3.6377 0.284
sll2010 Reverse -36 -55 3.44104 0.284
sll2008 Reverse -140 -159 2.94938 0.284
slr2135 Forward -25 -6 2.94938 0.284
sll2002 Forward -385 -366 2.75272 0.285
slr2144 Forward -275 -256 3.44104 0.284
sll1694 Forward -172 -153 6.58763 0.259
sll1692 Forward -187 -168 8.06259 0.259
slr1819 Reverse -308 -327 8.06259 0.259
sll0846 Reverse -43 -62 1.86774 0.293
slr0862 Forward -147 -128 1.86774 0.293
sll0842 Reverse -305 -324 5.40766 0.284
sll0842 Reverse -160 -179 3.14605 0.284
sll0837 Forward -201 -182 14.1591 0.177
slr1246 Reverse -302 -321 1.17943 0.294
sll1156 Reverse -201 -220 1.47442 0.294
sll1961 Reverse -188 -207 1.86774 0.293
slr2058 Reverse -5 -24 1.67108 0.294
sll1909 Forward -61 -42 2.94938 0.284
slr1993 Reverse -362 -381 7.66927 0.259
slr1998 Forward -97 -78 2.45773 0.287
slr2004 Reverse -290 -309 2.55606 0.285
slr1715 Forward -263 -244 7.37428 0.259
ssl3127 Reverse -42 -61 4.32602 0.284
sll1600 Reverse -137 -156 2.3594 0.287
sll1598 Reverse -278 -297 6.98095 0.259
sll1592 Forward -165 -146 6.58763 0.259
sll0250 Reverse -310 -329 2.85105 0.285
ssl0461 Reverse -46 -65 2.85105 0.285
sll1425 Forward -400 -381 11.9958 0.189
sll1424 Reverse -285 -304 2.65439 0.285
sll1423 Reverse -16 -35 2.85105 0.285
slr1512 Forward -217 -198 1.17943 0.294
ssr2551 Reverse -182 -201 2.3594 0.287
sll1994a Forward -122 -103 4.42435 0.284
sll0815 Forward -100 -81 10.4225 0.224
slr0812 Reverse -315 -334 7.07928 0.259
slr1347 Reverse -115 -134 3.14605 0.284
slr1959 Forward -282 -263 12.3892 0.177
slr1962 Forward -288 -269 3.24438 0.284
sll1891 Reverse -52 -71 2.0644 0.289
slr1970 Reverse -1 -20 2.45773 0.287
sll1885 Reverse -339 -358 7.07928 0.259
sll1884 Forward -329 -310 16.9124 0.136
sll1879 Reverse -91 -110 3.73603 0.284
sll1178 Forward -262 -243 3.53937 0.284
slr1266 Reverse -203 -222 2.55606 0.285
slr1272 Forward -206 -187 3.44104 0.284
slr1273 Reverse -38 -57 6.88262 0.259
slr1276 Forward -319 -300 5.11266 0.284
sll1444 Reverse -319 -338 6.39097 0.265
sll1444 Reverse -121 -140 5.40766 0.284
slr1170 Reverse -166 -185 6.98095 0.259
sll1087 Reverse -269 -288 2.65439 0.285
slr1678 Forward -367 -348 2.75272 0.285
ssr2806 Forward -262 -243 2.16274 0.288
sll1557 Forward -304 -285 3.04771 0.284
slr1690 Reverse -1 -20 3.53937 0.284
slr0937 Reverse -180 -199 4.81767 0.284
slr0950 Forward -150 -131 8.55425 0.259
slr0953 Forward -137 -118 2.26107 0.288
ssr1600 Forward -161 -142 1.96607 0.29
slr0955 Reverse -6 -25 4.81767 0.284
sll0905 Reverse -63 -82 3.14605 0.284
slr0959 Forward -25 -6 3.14605 0.284
slr1628 Reverse -314 -333 1.37609 0.294
slr1643 Reverse -91 -110 3.24438 0.284
sll1524 Reverse -321 -340 1.37609 0.294
sll1520 Reverse -238 -257 6.58763 0.259
sll0428 Reverse -128 -147 1.86774 0.293
sll0420 Forward -82 -63 4.916 0.284
sll0418 Reverse -166 -185 4.62101 0.284
slr0448 Reverse -306 -325 3.83436 0.284
slr0448 Forward -51 -32 2.55606 0.285
sll0272 Reverse -46 -65 3.73603 0.284
sll0269 Reverse -22 -41 6.58763 0.259
sll0264 Reverse -96 -115 4.12936 0.284
sll0263 Reverse -195 -214 1.57275 0.294
slr0291 Forward -78 -59 3.83436 0.284
sll0258 Reverse -28 -47 2.94938 0.284
slr0392 Reverse -315 -334 4.71934 0.284
slr0401 Reverse -259 -278 1.76941 0.293
sll0356 Reverse -262 -281 2.26107 0.288
sll0149 Reverse -322 -341 5.99764 0.28
sll1864 Reverse -329 -348 5.89931 0.28
slr1927 Forward -237 -218 5.89931 0.28
slr1946 Forward -201 -182 1.57275 0.294
slr0326 Reverse -322 -341 13.6675 0.177
sll0293 Reverse -306 -325 15.8307 0.137
slr0338 Forward -355 -336 9.83255 0.236
sll0177 Forward -166 -147 6.58763 0.259
sll0174 Reverse -258 -277 2.16274 0.288
sll0170 Reverse -355 -374 2.45773 0.287
sll0167 Forward -371 -352 2.94938 0.284
slr0370 Forward -183 -164 3.93269 0.284
slr0379 Reverse -49 -68 12.5858 0.177
slr0379 Reverse -362 -381 4.03102 0.284
ssl1426 Reverse -333 -352 5.01433 0.284
smr0001 Forward -283 -264 4.42435 0.284
ssl1417 Forward -313 -294 2.85105 0.285
sll0751 Reverse -89 -108 2.16274 0.288
slr0782 Forward -47 -28 2.16274 0.288
sll0750 Reverse -271 -290 2.55606 0.285
sll0325 Forward -136 -117 4.52268 0.284
slr0342 Reverse -87 -106 4.52268 0.284
sll0017 Forward -243 -224 5.89931 0.28
slr0008 Reverse -371 -390 5.30933 0.284
sll0012 Reverse -221 -240 1.47442 0.294
slr0018 Forward -87 -68 11.3075 0.209
sll0006 Forward -223 -204 4.32602 0.284
slr0214 Forward -296 -277 4.42435 0.284
slr0224 Reverse -335 -354 2.85105 0.285
sll0414 Forward -326 -307 2.26107 0.288
sll0414 Forward -319 -300 1.27776 0.294
ssl0788 Reverse -284 -303 5.60432 0.284
ssl0787 Reverse -381 -400 5.30933 0.284
ssr0102 Forward -177 -158 3.83436 0.284
sll0070 Forward -74 -55 3.24438 0.284
slr0051 Reverse -17 -36 3.24438 0.284
sll0068 Reverse -160 -179 7.17762 0.259
slr0054 Reverse -65 -84 2.94938 0.284
slr0060 Forward -110 -91 3.53937 0.284
slr0064 Forward -199 -180 6.68596 0.259
sll0055 Reverse -120 -139 3.53937 0.284
slr0067 Forward -101 -82 3.53937 0.284
sll0462 Reverse -75 -94 3.34271 0.284
sll0682 Reverse -6 -25 1.47442 0.294
slr0635 Reverse -113 -132 12.3892 0.177
sll0603 Reverse -208 -227 2.75272 0.285
slr0645 Reverse -267 -286 3.6377 0.284
slr0650 Reverse -325 -344 2.94938 0.284
sll0189 Reverse -245 -264 5.11266 0.284
sll0189 Reverse -380 -399 3.24438 0.284
slr0196 Reverse -296 -315 1.76941 0.293
sll0184 Reverse -9 -28 3.53937 0.284
slr0201 Forward -298 -279 3.53937 0.284
sll0886 Reverse -342 -361 2.55606 0.285
slr0918 Reverse -247 -266 3.04771 0.284
sll0891 Forward -385 -366 2.0644 0.289
ssl1690 Forward -129 -110 2.0644 0.289
slr0921 Reverse -254 -273 2.0644 0.289
sll0553 Reverse -312 -331 1.17943 0.294
slr0565 Forward -78 -59 1.17943 0.294
sll0547 Forward -169 -150 3.24438 0.284
slr0581 Forward -310 -291 4.22769 0.284
sll0832 Forward -336 -317 4.12936 0.284
slr0833 Reverse -242 -261 4.12936 0.284
slr0839 Forward -353 -334 1.57275 0.294
sll0822 Reverse -367 -386 1.37609 0.294
sll0489 Forward -336 -317 2.65439 0.285
slr0505 Reverse -276 -295 1.27776 0.294
sll0479 Forward -118 -99 2.16274 0.288
sll0588 Forward -217 -198 3.53937 0.284
sll0587 Forward -333 -314 4.916 0.284
sll0584 Forward -56 -37 7.66927 0.259
slr0624 Reverse -114 -133 7.66927 0.259
slr0625 Forward -317 -298 4.81767 0.284
slr0104 Reverse -9 -28 3.6377 0.284
slr0114 Reverse -206 -225 11.9958 0.189
sll0092 Reverse -324 -343 4.03102 0.284
sll0288 Forward -242 -223 6.78429 0.259
sll0284 Reverse -11 -30 1.47442 0.294
slr0794 Forward -117 -98 10.3242 0.224
slr0794 Forward -385 -366 7.37428 0.259
sll0788 Forward -245 -226 1.17943 0.294
slr0800 Reverse -297 -316 1.17943 0.294
sll0666 Forward -136 -117 6.98095 0.259
sll0664 Forward -217 -198 5.01433 0.284
sll0739 Reverse -379 -398 3.53937 0.284
sll0737 Forward -183 -164 1.47442 0.294
sll0037 Reverse -335 -354 2.55606 0.285
sll0033 Reverse -337 -356 13.5691 0.177
slr0535 Reverse -279 -298 1.96607 0.29
sll0503 Forward -377 -358 3.53937 0.284
slr0543 Reverse -83 -102 3.44104 0.284
sll0497 Forward -225 -206 1.96607 0.29
sll0493 Forward -154 -135 1.86774 0.293
sll0902 Forward -318 -299 7.37428 0.259
sll0535 Reverse -37 -56 4.32602 0.284
slr0550 Forward -274 -255 6.4893 0.262
slr0550 Forward -83 -64 1.76941 0.293
ssl1004 Forward -397 -378 12.7825 0.177
slr0557 Forward -356 -337 3.24438 0.284
slr1459 Reverse -314 -333 3.53937 0.284
slr1461 Reverse -290 -309 2.16274 0.288
slr1556 Forward -64 -45 6.58763 0.259
slr1562 Reverse -281 -300 12.6841 0.177
sll1488 Forward -364 -345 10.2259 0.224
sll1482 Reverse -47 -66 2.94938 0.284
sll1471 Forward -198 -179 10.7175 0.224
slr1584 Reverse -41 -60 10.7175 0.224
sll1546 Reverse -27 -46 2.16274 0.288
ssr2786 Forward -175 -156 1.67108 0.294
sll0444 Forward -129 -110 1.76941 0.293
slr0453 Reverse -199 -218 6.29264 0.265
sll0436 Forward -229 -210 5.01433 0.284
slr0456 Reverse -175 -194 3.83436 0.284
slr0585 Reverse -371 -390 3.34271 0.284
slr0593 Reverse -221 -240 4.12936 0.284
sll0567 Forward -170 -151 8.35759 0.259
slr0607 Reverse -248 -267 18.9773 0.095
slr0609 Reverse -329 -348 2.16274 0.288
ssl5031 Reverse -318 -337 2.75272 0.285
sll5049 Forward -203 -184 4.03102 0.284
slr5051 Reverse -371 -390 5.01433 0.284
slr5054 Reverse -132 -151 4.12936 0.284
sll5061 Reverse -340 -359 4.22769 0.284
slr5085 Forward -372 -353 7.47261 0.259
ssl5098 Forward -297 -278 1.96607 0.29
ssl7007 Forward -226 -207 1.86774 0.293
sll7028 Reverse -221 -240 4.12936 0.284
sll7031 Forward -340 -321 1.27776 0.294
slr7032 Reverse -373 -392 1.27776 0.294
ssl7039 Reverse -126 -145 1.96607 0.29
slr7041 Forward -234 -215 1.96607 0.29
sll7055 Reverse -29 -48 1.96607 0.29
sll7067 Reverse -349 -368 3.44104 0.284
slr7101 Forward -324 -305 5.50599 0.284
slr8037 Reverse -54 -73 5.40766 0.284
slr8045 Reverse -141 -160 1.57275 0.294
ssr6003 Forward -148 -129 1.17943 0.294
slr6004 Forward -345 -326 1.17943 0.294
slr6031 Reverse -308 -327 2.16274 0.288
slr6039 Forward -294 -275 2.55606 0.285
slr6039 Forward -169 -150 1.67108 0.294
slr6042 Forward -238 -219 4.71934 0.284
sll6052 Forward -128 -109 1.27776 0.294
slr6063 Forward -148 -129 1.17943 0.294
slr6090 Reverse -308 -327 2.16274 0.288
sll6093 Reverse -355 -374 3.24438 0.284
slr6095 Forward -221 -202 3.24438 0.284
slr6097 Forward -335 -316 1.27776 0.294
slr6097 Forward -50 -31 1.27776 0.294
6803t08 Reverse -69 -88 2.3594 0.287
6803t09 Reverse -236 -255 4.62101 0.284
6803t12 Forward -157 -138 1.37609 0.294
6803t14 Forward -226 -207 3.24438 0.284
6803t17 Reverse -379 -398 12.4875 0.177
6803t32 Reverse -297 -316 3.53937 0.284
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.167  0.667  0.000  0.167  
0.000 0.167 0.833 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.500 0.500
0.000 0.333 0.667 0.000
1.000 0.000 0.000 0.000
0.333 0.333 0.167 0.167
0.333 0.167 0.000 0.500
0.667 0.000 0.333 0.000
0.167 0.667 0.167 0.000
0.000 0.000 0.833 0.167
0.000 0.000 1.000 0.000
0.000 0.167 0.833 0.000
0.333 0.000 0.333 0.333
0.167 0.500 0.333 0.000
0.000 0.000 1.000 0.000
0.167 0.333 0.500 0.000
0.667 0.000 0.000 0.333