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Details for NP_440167.1_3

Name NP_440167.1_3
Length 20
Regular expression [GT][GT]C[CG][GAC]G[CA][GA]G[TG]GGTGA[TC][GCA]GC[CA]
Central No

Motif logo

Genes containing this motif

234 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1315 Forward -159 -140 8.06259 0.283
sll1064 Forward -88 -69 10.4225 0.239
sll1052 Forward -393 -374 8.45592 0.28
slr0730 Forward -398 -379 8.06259 0.283
slr0732 Reverse -333 -352 8.35759 0.28
sll0703 Reverse -290 -309 10.6192 0.233
ssl1326 Reverse -319 -338 8.45592 0.28
slr0243 Forward -155 -136 8.35759 0.28
sll0230 Reverse -305 -324 9.73422 0.247
sll0227 Reverse -286 -305 11.3075 0.231
sll1322 Forward -232 -213 13.9625 0.178
sll1035 Reverse -272 -291 11.2092 0.231
sll1031 Forward -212 -193 11.7992 0.21
sll1031 Reverse -193 -212 7.57094 0.3
slr1776 Reverse -296 -315 18.584 0.0628
slr1795 Forward -114 -95 13.6675 0.182
sll1664 Forward -334 -315 9.3409 0.258
sll1659 Reverse -237 -256 9.24257 0.259
sll1658 Reverse -85 -104 12.3892 0.198
slr1799 Forward -61 -42 12.3892 0.198
slr1800 Reverse -226 -245 13.0775 0.195
sll1196 Reverse -348 -367 8.55425 0.28
slr0963 Reverse -313 -332 10.8159 0.233
slr0971 Forward -306 -287 9.63589 0.247
ssr1766 Reverse -154 -173 8.75091 0.273
sll1020 Reverse -326 -345 10.7175 0.233
slr0679 Forward -104 -85 8.45592 0.28
sll0639 Forward -282 -263 8.75091 0.273
slr1591 Reverse -297 -316 10.1275 0.246
sll1501 Reverse -95 -114 9.63589 0.247
sll1004 Reverse -46 -65 16.1257 0.146
slr1761 Reverse -92 -111 13.3725 0.185
slr1763 Forward -206 -187 7.96426 0.286
slr1763 Forward -220 -201 7.66927 0.296
sll1635 Reverse -175 -194 8.25926 0.281
sll1749a Forward -249 -230 8.16093 0.281
slr1851 Reverse -345 -364 8.16093 0.281
smr0006 Reverse -129 -148 14.4541 0.157
smr0007 Reverse -273 -292 14.4541 0.157
sll1942 Forward -380 -361 9.14423 0.26
slr2045 Reverse -360 -379 19.5673 0.0581
sll1932 Reverse -350 -369 10.2259 0.244
sll1932 Forward -208 -189 7.7676 0.294
sll0997 Reverse -311 -330 9.83255 0.247
sll0993 Reverse -258 -277 7.57094 0.3
slr1022 Forward -229 -210 7.57094 0.3
slr1385 Reverse -320 -339 15.1424 0.15
slr1391 Reverse -174 -193 8.75091 0.273
slr1395 Reverse -306 -325 7.96426 0.286
slr1708 Reverse -140 -159 8.94757 0.269
sll1570 Reverse -98 -117 14.7491 0.157
slr1710 Forward -301 -282 10.1275 0.246
sll1568 Reverse -52 -71 9.93088 0.247
slr2010 Forward -334 -315 9.83255 0.247
sll1915 Reverse -69 -88 7.66927 0.296
slr2026 Forward -101 -82 7.66927 0.296
slr1139 Reverse -240 -259 9.3409 0.258
slr1147 Forward -361 -342 9.93088 0.247
ssl2084 Reverse -38 -57 10.5209 0.233
sll1817 Reverse -96 -115 11.5042 0.223
sll1812 Forward -161 -142 14.6508 0.157
sll1811 Forward -307 -288 11.6025 0.217
sll1800 Reverse -219 -238 12.3892 0.198
sll1787 Reverse -163 -182 9.63589 0.247
sll1123 Reverse -218 -237 9.14423 0.26
slr1196 Forward -92 -73 7.7676 0.294
sll1726 Reverse -287 -306 11.7992 0.21
slr1543 Forward -382 -363 14.6508 0.157
sll1466 Reverse -310 -329 10.3242 0.243
ssl2823 Reverse -76 -95 10.3242 0.243
slr1238 Forward -207 -188 13.1758 0.192
sll1360 Reverse -86 -105 9.53756 0.251
slr1440 Forward -82 -63 9.53756 0.251
slr1444 Forward -261 -242 9.24257 0.259
sll1267 Forward -358 -339 12.9791 0.196
sll0861 Forward -348 -329 8.16093 0.281
slr1856 Reverse -113 -132 8.16093 0.281
sll1764 Forward -184 -165 9.24257 0.259
slr1879 Reverse -153 -172 8.45592 0.28
slr2135 Reverse -304 -323 11.2092 0.231
sll2003 Reverse -135 -154 9.3409 0.258
slr2143 Forward -196 -177 9.3409 0.258
slr1811 Reverse -305 -324 8.94757 0.269
sll0855 Forward -73 -54 9.93088 0.247
slr0861 Forward -88 -69 12.5858 0.198
sll0839 Reverse -65 -84 9.53756 0.251
sll1164 Forward -128 -109 9.93088 0.247
sll1160 Reverse -155 -174 12.3892 0.198
ssl2296 Reverse -310 -329 19.9606 0.0525
slr1260 Reverse -225 -244 16.5191 0.144
slr1990 Forward -314 -295 8.06259 0.283
slr1991 Forward -356 -337 8.35759 0.28
slr1992 Reverse -97 -116 8.65258 0.28
sll1906 Forward -215 -196 10.5209 0.233
sll1905 Reverse -241 -260 15.4374 0.147
slr2004 Reverse -292 -311 10.2259 0.244
slr1719 Reverse -303 -322 11.0125 0.231
sll1979 Reverse -96 -115 13.5691 0.182
slr2094 Forward -141 -122 13.5691 0.182
slr2099 Reverse -107 -126 18.6823 0.0628
slr1517 Reverse -113 -132 8.25926 0.281
slr2125 Reverse -363 -382 12.6841 0.197
sll1234 Forward -84 -65 8.45592 0.28
ssr2201 Reverse -197 -216 8.45592 0.28
slr0812 Reverse -255 -274 9.14423 0.26
sll1255 Forward -370 -351 8.16093 0.281
slr1350 Reverse -243 -262 8.16093 0.281
ssl3573 Forward -298 -279 11.2092 0.231
sll1892 Reverse -135 -154 7.7676 0.294
slr1975 Forward -313 -294 12.8808 0.196
sll1879 Forward -278 -259 8.35759 0.28
sll1876 Reverse -290 -309 16.0274 0.146
sll1871 Reverse -266 -285 7.86593 0.289
sll1389 Forward -146 -127 9.0459 0.266
slr1469 Forward -40 -21 12.7825 0.196
slr1470 Forward -386 -367 12.7825 0.196
slr1270 Reverse -156 -175 7.86593 0.289
slr1275 Forward -259 -240 10.0292 0.247
slr1282 Reverse -356 -375 11.7008 0.215
slr1533 Forward -225 -206 11.3075 0.231
sll1104 Forward -135 -116 8.55425 0.28
slr1171 Forward -225 -206 9.83255 0.247
slr1678 Forward -354 -335 9.63589 0.247
sll1557 Reverse -341 -360 8.16093 0.281
sll1556 Reverse -222 -241 8.75091 0.273
sll1556 Forward -251 -232 7.86593 0.289
slr0953 Forward -354 -335 10.8159 0.233
slr0959 Reverse -341 -360 17.6007 0.0981
sll0426 Forward -344 -325 11.0125 0.231
sll0420 Reverse -177 -196 11.7992 0.21
sll0269 Reverse -24 -43 8.25926 0.281
sll0258 Reverse -125 -144 8.75091 0.273
sll0362 Forward -237 -218 9.93088 0.247
ssr0657 Forward -116 -97 9.73422 0.247
sll0136 Reverse -343 -362 8.35759 0.28
sll0135 Reverse -125 -144 8.75091 0.273
sll1854 Forward -173 -154 8.94757 0.269
sll1848 Reverse -381 -400 9.43923 0.256
slr1944 Forward -390 -371 14.5524 0.157
slr1946 Forward -146 -127 8.35759 0.28
slr0322 Reverse -132 -151 21.2389 0.0393
ssl0563 Forward -270 -251 11.1109 0.231
slr0331 Reverse -99 -118 11.1109 0.231
slr0168 Forward -132 -113 9.63589 0.247
sll0157 Reverse -103 -122 9.43923 0.256
slr0362 Forward -216 -197 7.96426 0.286
sml0001 Reverse -182 -201 14.3558 0.16
sml0001 Forward -211 -192 9.73422 0.247
sll0336 Reverse -8 -27 11.0125 0.231
slr0379 Reverse -94 -113 15.6341 0.147
slr0379 Reverse -167 -186 10.2259 0.244
slr0347 Reverse -200 -219 18.9773 0.0628
sll0320 Reverse -345 -364 9.63589 0.247
sll0312 Reverse -373 -392 13.5691 0.182
sll0023 Reverse -140 -159 10.0292 0.247
sll0023 Reverse -104 -123 7.86593 0.289
slr0001 Reverse -318 -337 8.65258 0.28
slr0007 Reverse -215 -234 11.1109 0.231
slr0020 Forward -224 -205 12.1925 0.201
slr1000 Reverse -313 -332 10.2259 0.244
sll0204 Forward -278 -259 23.3039 0.0345
slr0222 Reverse -313 -332 8.75091 0.273
sll0195 Reverse -374 -393 12.6841 0.197
sll0412 Reverse -176 -195 14.2574 0.162
slr0436 Reverse -16 -35 15.5357 0.147
sll0058 Forward -274 -255 8.45592 0.28
slr0066 Forward -120 -101 17.404 0.101
slr0479 Reverse -11 -30 13.7658 0.182
slr0482 Forward -85 -66 10.5209 0.233
slr0487 Forward -308 -289 7.96426 0.286
sll0455 Reverse -221 -240 9.14423 0.26
sll0614 Reverse -105 -124 15.9291 0.146
slr0634 Forward -75 -56 15.8307 0.146
slr0650 Forward -283 -264 8.45592 0.28
slr0415 Forward -369 -350 10.6192 0.233
slr0418 Reverse -59 -78 11.0125 0.231
sll0384 Reverse -329 -348 7.57094 0.3
sll0380 Reverse -91 -110 7.96426 0.286
slr0421 Reverse -369 -388 7.66927 0.296
sll0370 Forward -80 -61 10.6192 0.233
slr0192 Reverse -261 -280 12.4875 0.198
ssl1690 Forward -279 -260 10.7175 0.233
slr0921 Reverse -104 -123 10.7175 0.233
slr0923 Forward -151 -132 11.6025 0.217
sll0542 Forward -288 -269 11.7992 0.21
sll0833 Forward -321 -302 12.0942 0.206
ssl1533 Forward -104 -85 15.1424 0.15
ssl1533 Reverse -260 -279 12.7825 0.196
slr0845 Reverse -107 -126 15.1424 0.15
slr0072 Reverse -27 -46 15.0441 0.151
slr0082 Reverse -113 -132 8.16093 0.281
sll0078 Reverse -332 -351 7.57094 0.3
slr0088 Forward -296 -277 12.2908 0.199
slr0093 Forward -323 -304 20.4523 0.0451
slr0093 Forward -282 -263 9.14423 0.26
slr0510 Forward -355 -336 10.1275 0.246
sll0596 Forward -286 -267 14.5524 0.157
slr0616 Reverse -167 -186 8.75091 0.273
sll0588 Reverse -308 -327 8.06259 0.283
slr0103 Forward -354 -335 13.2741 0.188
slr0104 Reverse -372 -391 10.6192 0.233
slr0112 Reverse -262 -281 15.9291 0.146
slr0119 Reverse -173 -192 10.8159 0.233
slr0302 Forward -290 -271 8.25926 0.281
sll0286 Forward -164 -145 11.7992 0.21
sll0284 Reverse -26 -45 8.35759 0.28
slr0790 Forward -225 -206 10.5209 0.233
sll0789 Reverse -192 -211 8.06259 0.283
sll0777 Reverse -176 -195 11.2092 0.231
sll0042 Reverse -213 -232 12.8808 0.196
sll0034 Forward -74 -55 13.4708 0.185
sll0514 Forward -28 -9 20.944 0.0393
slr0926 Forward -52 -33 13.3725 0.185
sll0533 Forward -271 -252 7.66927 0.296
slr0549 Reverse -223 -242 7.66927 0.296
slr1420 Forward -391 -372 8.84924 0.273
slr1431 Forward -272 -253 9.24257 0.259
slr1455 Forward -253 -234 10.9142 0.233
sll0626 Forward -231 -212 7.86593 0.289
sll1496 Forward -316 -297 16.4207 0.144
slr1562 Forward -179 -160 19.3707 0.0581
slr1585 Reverse -163 -182 13.6675 0.182
slr1653 Reverse -108 -127 21.7306 0.0393
slr1653 Forward -137 -118 10.8159 0.233
slr1666 Forward -346 -327 15.4374 0.147
slr1666 Forward -371 -352 11.8975 0.21
slr1666 Forward -359 -340 8.06259 0.283
sll0446 Forward -214 -195 21.4356 0.0393
slr0457 Forward -77 -58 12.2908 0.199
slr0597 Forward -195 -176 9.0459 0.266
slr0609 Forward -256 -237 18.6823 0.0628
sll5052 Reverse -214 -233 11.9958 0.21
sll5059 Forward -391 -372 7.7676 0.294
sll5109 Reverse -19 -38 10.5209 0.233
sll5122 Forward -172 -153 9.73422 0.247
ssl7053 Reverse -223 -242 8.55425 0.28
sll7078 Reverse -291 -310 12.1925 0.201
slr7101 Reverse -160 -179 12.5858 0.198
ssl8028 Forward -375 -356 9.83255 0.247
sll8034 Reverse -212 -231 9.83255 0.247
sll8048 Reverse -193 -212 10.9142 0.233
slr6043 Reverse -214 -233 8.35759 0.28
ssr6048 Forward -347 -328 8.25926 0.281
sll6053 Forward -98 -79 9.24257 0.259
6803t01 Reverse -151 -170 8.94757 0.269
6803t39 Forward -317 -298 9.93088 0.247
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.750  0.250  
0.167 0.000 0.583 0.250
0.000 0.833 0.167 0.000
0.000 0.667 0.333 0.000
0.250 0.250 0.333 0.167
0.167 0.083 0.750 0.000
0.333 0.500 0.167 0.000
0.333 0.000 0.667 0.000
0.000 0.167 0.833 0.000
0.000 0.000 0.333 0.667
0.083 0.083 0.750 0.083
0.000 0.167 0.833 0.000
0.000 0.083 0.000 0.917
0.083 0.083 0.833 0.000
0.917 0.083 0.000 0.000
0.167 0.250 0.083 0.500
0.250 0.333 0.417 0.000
0.000 0.000 1.000 0.000
0.000 0.917 0.083 0.000
0.333 0.583 0.000 0.083