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Details for NP_440141.1_4

Name NP_440141.1_4
Length 20
Regular expression GA[CT]GGCCGTGG[CT]GA[AG]GG[TC]GC
Central No

Motif logo

Genes containing this motif

180 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Forward -339 -320 -6.09707 0.296
ssl2069 Forward -343 -324 -5.11376 0.296
sll1049 Forward -311 -292 -11.7019 0.298
slr0721 Reverse -265 -284 -4.81876 0.296
slr0729 Forward -389 -370 -7.37537 0.298
slr0741 Reverse -211 -230 -7.08038 0.298
ssl0410 Forward -295 -276 -12.0953 0.298
sll0220 Forward -274 -255 -10.3253 0.298
sll1324 Forward -305 -286 -7.17871 0.298
sll1041 Reverse -130 -149 -4.32711 0.296
sll1027 Reverse -176 -195 -8.45701 0.298
slr1109 Forward -103 -84 -8.45701 0.298
sll1676 Forward -230 -211 -6.29373 0.296
slr1787 Reverse -370 -389 -6.29373 0.296
sll1669 Reverse -311 -330 -5.99873 0.296
slr1794 Forward -200 -181 -9.34199 0.298
ssr3000 Reverse -148 -167 -4.32711 0.296
sll1201 Reverse -331 -350 -8.06369 0.298
ssr2142 Reverse -90 -109 -11.8986 0.298
sll1185 Reverse -304 -323 -5.70374 0.296
slr0963 Reverse -305 -324 12.9791 0.0585
slr0967 Reverse -162 -181 -8.752 0.298
sll0932 Forward -299 -280 -5.80207 0.296
sll0928 Reverse -115 -134 -2.26216 0.296
sll1021 Forward -179 -160 -4.03212 0.296
slr0686 Forward -224 -205 -12.0953 0.298
sll0638 Forward -202 -183 -6.68705 0.298
slr1595 Forward -307 -288 -6.09707 0.296
sll1501 Reverse -102 -121 -6.09707 0.296
sll1501 Forward -123 -104 -11.5053 0.298
slr1052 Forward -333 -314 4.62101 0.294
slr1760 Forward -45 -26 -5.99873 0.296
slr2047 Reverse -36 -55 1.17943 0.296
sll0993 Forward -358 -339 -3.3438 0.296
sll0993 Reverse -357 -376 -5.80207 0.296
sll0981 Reverse -327 -346 -11.7019 0.298
sll1579 Forward -171 -152 -11.8003 0.298
slr2012 Forward -123 -104 -5.50708 0.296
slr2016 Forward -375 -356 -11.9969 0.298
slr2026 Reverse -355 -374 -1.7705 0.296
sll1913 Reverse -124 -143 -7.4737 0.298
sll1824 Forward -348 -329 -7.67036 0.298
sll1822 Reverse -371 -390 -5.80207 0.296
sll1804 Forward -378 -359 20.8456 0.00774
ssl3432 Forward -170 -151 -6.29373 0.296
sll1802 Reverse -378 -397 -12.0953 0.298
sll1801 Reverse -284 -303 -8.65367 0.298
sll1801 Reverse -23 -42 -12.0953 0.298
sll1800 Forward -54 -35 -11.1119 0.298
slr1902 Reverse -243 -262 -3.24547 0.296
sll1791 Reverse -321 -340 -8.752 0.298
sll1787 Reverse -45 -64 -8.94866 0.298
sll1123 Forward -81 -62 -11.6036 0.298
sll1120 Reverse -134 -153 -9.83364 0.298
sll1119 Reverse -7 -26 -11.3086 0.298
slr1194 Forward -136 -117 -11.3086 0.298
sll1740 Forward -272 -253 -7.86702 0.298
sll1725 Forward -198 -179 2.75272 0.296
sll1713 Reverse -21 -40 -5.99873 0.296
slr1543 Forward -390 -371 -11.9969 0.298
slr1550 Reverse -131 -150 -11.2103 0.298
slr1220 Reverse -12 -31 -4.6221 0.296
slr1222 Reverse -12 -31 -6.78538 0.298
sll1135 Forward -381 -362 -11.3086 0.298
ssr2047 Forward -125 -106 -7.96535 0.298
slr1234 Forward -199 -180 -11.6036 0.298
slr0879 Reverse -292 -311 -5.31042 0.296
sll0860 Reverse -328 -347 -4.91709 0.296
sll1772 Forward -327 -308 -5.9004 0.296
sll1765 Forward -200 -181 -10.522 0.298
sll1764 Forward -381 -362 -8.26035 0.298
sll1764 Reverse -156 -175 -11.2103 0.298
sll1764 Forward -186 -167 -11.8003 0.298
ssl3291 Forward -100 -81 -5.31042 0.296
sll1702 Reverse -206 -225 -6.98204 0.298
sll1698 Forward -61 -42 -3.3438 0.296
slr1820 Forward -389 -370 -3.3438 0.296
slr1746 Forward -195 -176 -6.39206 0.296
slr0854 Forward -268 -249 -7.08038 0.298
sll0848 Forward -115 -96 -11.8986 0.298
slr1250 Forward -294 -275 -4.6221 0.296
sll1958 Reverse -249 -268 -11.4069 0.298
slr1986 Reverse -213 -232 -10.522 0.298
slr1999 Reverse -247 -266 -6.49039 0.296
sll1605 Forward -373 -354 -12.0953 0.298
slr1731 Reverse -244 -263 -11.1119 0.298
sll1979 Reverse -97 -116 1.67108 0.296
slr2094 Forward -140 -121 1.67108 0.296
slr2098 Forward -324 -305 -3.83545 0.296
slr2099 Reverse -108 -127 -2.36049 0.296
slr2103 Forward -131 -112 -3.44213 0.296
sll1995 Reverse -62 -81 -9.93197 0.298
slr2131 Reverse -198 -217 -11.1119 0.298
sll1221 Forward -212 -193 -5.11376 0.296
slr0813 Reverse -59 -78 -4.81876 0.296
sll1249 Forward -260 -241 -10.9153 0.298
slr1349 Reverse -341 -360 -12.1936 0.299
sll1899 Forward -205 -186 -11.9969 0.298
sll1894 Forward -343 -324 -6.98204 0.298
slr1966 Reverse -316 -335 -10.227 0.298
sll1886 Reverse -283 -302 -6.49039 0.296
slr1979 Reverse -15 -34 -6.29373 0.296
slr1533 Forward -249 -230 -11.8986 0.298
sll1085 Reverse -275 -294 -9.63698 0.298
slr1677 Forward -235 -216 -2.55715 0.296
slr1679 Forward -192 -173 -10.522 0.298
sll1562 Reverse -350 -369 -1.96717 0.296
slr0937 Reverse -298 -317 6.68596 0.169
slr0937 Reverse -304 -323 -11.2103 0.298
slr0937 Reverse -32 -51 -11.8986 0.298
slr0941 Forward -399 -380 -6.09707 0.296
sll1528 Reverse -192 -211 -11.6036 0.298
ssl2971 Forward -226 -207 -5.9004 0.296
sll1521 Forward -275 -256 -6.68705 0.298
slr0406 Forward -89 -70 -7.76869 0.298
sll0145 Reverse -278 -297 -11.2103 0.298
sll0136 Reverse -301 -320 -5.11376 0.296
slr1924 Forward -254 -235 -9.24366 0.298
slr1926 Reverse -291 -310 -5.60541 0.296
slr0322 Forward -268 -249 -11.5053 0.298
sll0177 Reverse -293 -312 -11.2103 0.298
sll0762 Reverse -325 -344 -11.8986 0.298
sll0759 Reverse -106 -125 -10.227 0.298
slr0342 Reverse -294 -313 -2.0655 0.296
slr0348 Forward -321 -302 -10.227 0.298
sll0309 Reverse -242 -261 -5.31042 0.296
slr0224 Reverse -207 -226 -3.24547 0.296
ssl0788 Reverse -171 -190 -4.91709 0.296
slr0049 Forward -301 -282 -7.4737 0.298
slr0055 Forward -361 -342 -10.6203 0.298
slr0058 Forward -50 -31 -11.9969 0.298
sll0051 Reverse -297 -316 -11.9969 0.298
slr0468 Forward -65 -46 -10.0303 0.298
slr0479 Forward -192 -173 -11.9969 0.298
sll0454 Reverse -112 -131 -7.96535 0.298
sll0609 Reverse -135 -154 -9.44032 0.298
sll0396 Reverse -348 -367 -10.522 0.298
ssl0353 Forward -300 -281 -5.70374 0.296
ssl0331 Reverse -371 -390 -8.65367 0.298
slr0918 Reverse -269 -288 -10.7186 0.298
slr0924 Reverse -33 -52 -6.29373 0.296
slr0827 Reverse -317 -336 -8.35868 0.298
ssl1552 Forward -70 -51 -7.67036 0.298
sll0830 Reverse -331 -350 -7.08038 0.298
sll0829 Reverse -368 -387 -3.04881 0.296
slr0093 Forward -281 -262 -11.8003 0.298
slr0095 Reverse -169 -188 -12.1936 0.299
slr0509 Forward -362 -343 -6.49039 0.296
slr0513 Forward -385 -366 -11.7019 0.298
slr0516 Forward -228 -209 -5.01543 0.296
slr0619 Forward -270 -251 -8.55534 0.298
sll0095 Forward -168 -149 -12.1936 0.299
slr0112 Reverse -254 -273 -1.18052 0.296
slr0300 Forward -393 -374 -5.01543 0.296
sll0794 Forward -377 -358 -9.53865 0.298
slr0698 Forward -394 -375 -11.8986 0.298
sll0048 Forward -235 -216 -11.4069 0.298
slr0022 Reverse -217 -236 -11.4069 0.298
slr0527 Forward -239 -220 -12.1936 0.299
slr0536 Reverse -176 -195 -0.295539 0.296
sll0522 Forward -269 -250 -3.24547 0.296
slr1424 Reverse -353 -372 -11.9969 0.298
sll0631 Forward -386 -367 -10.6203 0.298
sll1498 Forward -144 -125 -11.2103 0.298
slr1557 Reverse -27 -46 -11.2103 0.298
sll1496 Forward -315 -296 -7.57203 0.298
sll1489 Forward -238 -219 -11.9969 0.298
sll1486 Forward -81 -62 -11.5053 0.298
sll1483 Forward -229 -210 -6.98204 0.298
sll1483 Forward -163 -144 -11.1119 0.298
sll1476 Reverse -241 -260 -11.9969 0.298
sll1550 Forward -82 -63 -10.1286 0.298
slr1660 Forward -325 -306 -6.29373 0.296
sll0436 Reverse -288 -307 -11.3086 0.298
slr0459 Reverse -312 -331 -5.40875 0.296
slr1179 Reverse -354 -373 -10.817 0.298
slr0586 Forward -311 -292 -5.21209 0.296
slr0605 Forward -142 -123 -6.1954 0.296
slr7099 Reverse -235 -254 -7.17871 0.298
sll8043 Reverse -108 -127 -12.0953 0.298
ssl6023 Reverse -100 -119 -9.34199 0.298
ssr6024 Forward -53 -34 -9.34199 0.298
sll6053 Forward -106 -87 -10.227 0.298
ssl6082 Reverse -100 -119 -9.34199 0.298
ssr6083 Forward -53 -34 -9.34199 0.298
6803t03 Reverse -223 -242 -10.6203 0.298
6803t24 Forward -381 -362 -11.7019 0.298
6803t27 Forward -364 -345 1.47442 0.296
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.833  0.167  
1.000 0.000 0.000 0.000
0.000 0.500 0.000 0.500
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.167 0.000 0.000 0.833
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.667 0.000 0.333
0.000 0.167 0.833 0.000
1.000 0.000 0.000 0.000
0.500 0.000 0.500 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.333 0.000 0.667
0.000 0.167 0.833 0.000
0.000 1.000 0.000 0.000