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Details for NP_440136.1_1

Name NP_440136.1_1
Length 17
Regular expression CTT[GT][AG]G[CT][GC]A[TG][GC][TA]TTTTC
Central No

Motif logo

Genes containing this motif

125 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1401 Forward -344 -328 22.6739 0.0444
sll1059 Reverse -33 -49 11.9559 0.238
sll1052 Reverse -52 -68 8.61263 0.295
slr0727 Forward -372 -356 10.8742 0.238
sll0700 Reverse -246 -262 9.69426 0.238
slr1411 Reverse -52 -68 9.98926 0.238
sll1325 Reverse -278 -294 16.0857 0.206
ssl2615 Reverse -98 -114 10.6776 0.238
sll1673 Reverse -65 -81 8.71096 0.293
ssr3000 Forward -297 -281 17.4624 0.174
slr1301 Forward -139 -123 9.89093 0.238
slr0965 Reverse -381 -397 9.59593 0.24
sll0933 Reverse -320 -336 11.5625 0.238
ssl1784 Reverse -33 -49 11.5625 0.238
slr1079 Reverse -140 -156 12.2509 0.238
sll1019 Forward -61 -45 10.4809 0.238
sll0651 Reverse -246 -262 9.69426 0.238
sll0650 Forward -304 -288 9.7926 0.238
sll0635 Forward -125 -109 9.59593 0.24
slr1600 Forward -287 -271 12.1525 0.238
ssl1918 Forward -361 -345 9.59593 0.24
slr2033 Forward -336 -320 14.3158 0.238
slr2038 Reverse -99 -115 10.4809 0.238
sll1933 Forward -27 -11 14.2175 0.238
sll1930 Reverse -246 -262 9.69426 0.238
ssr2318 Forward -162 -146 20.4123 0.113
sll1925 Forward -311 -295 11.3659 0.238
sll1925 Forward -148 -132 10.3826 0.238
slr2006 Reverse -67 -83 10.3826 0.238
slr2007 Reverse -245 -261 11.3659 0.238
slr2024 Reverse -305 -321 9.4976 0.243
sll1915 Reverse -187 -203 13.6275 0.238
slr2027 Reverse -218 -234 14.5125 0.238
sll1084 Forward -158 -142 10.4809 0.238
slr1136 Reverse -155 -171 10.4809 0.238
slr1203 Reverse -64 -80 10.0876 0.238
slr1226 Reverse -195 -211 8.71096 0.293
slr1230 Reverse -219 -235 9.10428 0.272
slr1235 Forward -208 -192 9.20261 0.266
sll0868 Forward -234 -218 9.89093 0.238
slr1407 Reverse -304 -320 9.89093 0.238
slr1878 Forward -25 -9 11.7592 0.238
sll1694 Reverse -118 -134 9.69426 0.238
sll0846 Reverse -101 -117 11.4642 0.238
slr0862 Forward -89 -73 11.4642 0.238
slr0871 Forward -212 -196 11.3659 0.238
ssr2078 Forward -151 -135 10.7759 0.238
ssr2087 Reverse -322 -338 8.90762 0.283
sll1611 Forward -317 -301 9.69426 0.238
slr1716 Reverse -246 -262 9.69426 0.238
sll1984 Reverse -246 -262 9.69426 0.238
slr1516 Forward -149 -133 12.1525 0.238
slr1524 Reverse -137 -153 12.0542 0.238
slr1524 Forward -368 -352 10.1859 0.238
slr2113 Reverse -246 -262 9.69426 0.238
sll1222 Reverse -147 -163 9.69426 0.238
slr0817 Forward -400 -384 10.2842 0.238
sll0804 Forward -158 -142 10.6776 0.238
sll1263 Reverse -306 -322 23.9522 0.023
sll1257 Reverse -246 -262 9.69426 0.238
sll1891 Forward -281 -265 17.0691 0.175
sll1891 Reverse -128 -144 9.4976 0.243
sll1437 Reverse -246 -262 9.69426 0.238
sll1096 Forward -61 -45 19.724 0.131
slr0942 Forward -288 -272 11.0709 0.238
slr0946 Forward -98 -82 10.9726 0.238
slr1639 Forward -164 -148 13.2342 0.238
ssr0756 Forward -171 -155 9.4976 0.243
sll0361 Forward -87 -71 12.7425 0.238
slr1931 Forward -156 -140 12.0542 0.238
sll1851 Forward -210 -194 9.69426 0.238
slr1937 Reverse -246 -262 9.69426 0.238
slr1946 Reverse -308 -324 13.9225 0.238
slr1950 Reverse -42 -58 11.0709 0.238
slr0990 Reverse -187 -203 14.8074 0.238
slr0990 Reverse -304 -320 13.2342 0.238
sll0301 Reverse -19 -35 9.7926 0.238
sll0296 Forward -118 -102 10.1859 0.238
sll0293 Reverse -21 -37 11.6609 0.238
slr0338 Forward -208 -192 11.6609 0.238
slr0171 Forward -384 -368 14.3158 0.238
ssl0294 Forward -203 -187 13.7258 0.238
sll0160 Forward -35 -19 10.9726 0.238
slr0381 Forward -151 -135 10.9726 0.238
sll0329 Reverse -55 -71 11.3659 0.238
sll0766 Forward -315 -299 9.69426 0.238
sll0762 Reverse -126 -142 10.2842 0.238
slr0341 Reverse -221 -237 10.2842 0.238
sll0317 Forward -247 -231 9.69426 0.238
sll0209 Reverse -365 -381 21.1989 0.0919
sll0201 Reverse -246 -262 9.69426 0.238
sll0690 Forward -361 -345 17.4624 0.174
ssl1300 Forward -101 -85 17.4624 0.174
sll0385 Forward -117 -101 11.4642 0.238
sll0181 Reverse -377 -393 9.7926 0.238
ssl0350 Reverse -14 -30 9.7926 0.238
slr0903 Reverse -242 -258 9.7926 0.238
slr0904 Forward -73 -57 13.6275 0.238
sll0102 Reverse -243 -259 8.90762 0.283
slr0105 Forward -103 -87 8.90762 0.283
sll0098 Forward -77 -61 11.6609 0.238
slr0108 Reverse -161 -177 11.6609 0.238
slr0109 Reverse -280 -296 10.3826 0.238
sll0797 Forward -101 -85 10.0876 0.238
slr0793 Reverse -18 -34 10.0876 0.238
slr0799 Forward -333 -317 9.7926 0.238
slr0697 Reverse -65 -81 13.2342 0.238
slr0703 Reverse -233 -249 9.69426 0.238
slr0765 Forward -178 -162 8.61263 0.295
sll0743 Forward -44 -28 8.61263 0.295
sll0507 Reverse -325 -341 10.1859 0.238
slr1429 Forward -394 -378 10.0876 0.238
slr1461 Reverse -179 -195 10.8742 0.238
sll1473 Reverse -45 -61 18.3473 0.174
ssr0817 Forward -173 -157 9.69426 0.238
slr0590 Forward -98 -82 8.80929 0.29
slr5038 Forward -134 -118 13.5292 0.238
ssr5121 Forward -278 -262 11.5625 0.238
slr7099 Reverse -352 -368 11.9559 0.238
sll7103 Forward -256 -240 9.69426 0.238
slr7105 Reverse -246 -262 9.69426 0.238
sll8025 Reverse -172 -188 12.0542 0.238
sll8042 Reverse -246 -262 9.69426 0.238
slr8044 Forward -183 -167 9.69426 0.238
slr8046 Reverse -246 -262 9.69426 0.238
slr6091 Forward -164 -148 10.1859 0.238
6803t17 Forward -263 -247 10.2842 0.238
6803t36 Reverse -50 -66 11.6609 0.238
6803t39 Reverse -335 -351 9.7926 0.238
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

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PSPM

0.143  0.714  0.143  0.000  
0.000 0.000 0.000 1.000
0.143 0.143 0.143 0.571
0.000 0.000 0.571 0.429
0.571 0.000 0.429 0.000
0.000 0.000 0.857 0.143
0.000 0.571 0.000 0.429
0.143 0.286 0.571 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.429 0.571
0.143 0.286 0.571 0.000
0.429 0.000 0.000 0.571
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 0.143 0.857
0.000 1.000 0.000 0.000